Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib268G0844 Durio zibethinus HOM05D006222 ORTHO05D007677 1.6e-65 253.1 177 100.0
Duzib268G0300 Durio zibethinus HOM05D006222 ORTHO05D007677 4.3e-58 228.4 171 97.1
Thecc.04G181000 Theobroma cacao HOM05D006222 ORTHO05D007677 1.3e-46 190.3 173 72.8
COL.COLO4_07298 Corchorus olitorius HOM05D006222 ORTHO05D007677 1.7e-38 163.3 171 67.3
Gohir.A10G136100 Gossypium hirsutum HOM05D006222 ORTHO05D007677 6.4e-38 161.4 96 87.5
Gorai.011G144300 Gossypium raimondii HOM05D006222 ORTHO05D007677 1.4e-37 160.2 96 87.5
Gohir.D10G130500 Gossypium hirsutum HOM05D006222 ORTHO05D007677 1.2e-36 157.1 96 86.5
Duzib212G0460 Durio zibethinus HOM05D006222 ORTHO05D007677 2.1e-33 146.4 100 79.0
Potri.014G150100 Populus trichocarpa HOM05D006222 ORTHO05D007677 2.0e-31 139.8 99 68.7
Sabra14G0113700 Salix brachista HOM05D006222 ORTHO05D007677 1.7e-30 136.7 99 64.6
MD04G1034000 Malus domestica HOM05D006222 ORTHO05D007677 5.4e-29 131.7 179 59.2
Prupe.1G180600 Prunus persica HOM05D006222 ORTHO05D007677 2.7e-28 129.4 170 55.9
Atru.chr3.1674 Acer truncatum HOM05D006222 ORTHO05D007677 1.8e-27 126.7 101 63.4
QL10p043789 Quercus lobata HOM05D006222 ORTHO05D007677 2.3e-27 126.3 98 63.3
QL10p047309 Quercus lobata HOM05D006222 ORTHO05D007677 2.3e-27 126.3 98 63.3
GSVIVG01031673001 Vitis vinifera HOM05D006222 ORTHO05D007677 1.5e-26 123.6 98 60.2
RcHm_v2.0_Chr4g0409281 Rosa chinensis HOM05D006222 ORTHO05D007677 3.3e-26 122.5 98 61.2
Ciclev10021532m.g Citrus clementina HOM05D006222 ORTHO05D007677 9.6e-26 120.9 94 64.9
Dinv22662 Davidia involucrata HOM05D006222 ORTHO05D007677 1.6e-25 120.2 105 56.2
Manes.11G113101 Manihot esculenta HOM05D006222 ORTHO05D007677 2.1e-25 119.8 94 61.7
Haze_11066 Corylus avellana HOM05D006222 ORTHO05D007677 2.8e-25 119.4 172 42.4
Sed0019288 Sechium edule HOM05D006222 ORTHO05D007677 4.8e-25 118.6 101 60.4
Cfa008558 Carpinus fangiana HOM05D006222 ORTHO05D007677 6.2e-25 118.2 171 42.7
PSO357G0657 Papaver somniferum HOM05D006222 ORTHO05D007677 6.2e-25 118.2 94 62.8
TAR362G1090 Trochodendron aralioides HOM05D006222 ORTHO05D007677 6.2e-25 118.2 101 59.4
Thhalv10017033m.g Eutrema salsugineum HOM05D006222 ORTHO05D007677 8.1e-25 117.9 98 56.1
PSO170G0570 Papaver somniferum HOM05D006222 ORTHO05D007677 8.1e-25 117.9 94 62.8
Lalb_Chr06g0164621 Lupinus albus HOM05D006222 ORTHO05D007677 1.1e-24 117.5 100 58.0
Sc07g0007090 Simmondsia chinensis HOM05D006222 ORTHO05D007677 1.1e-24 117.5 94 61.7
Oeu034479.1 Olea europaea HOM05D006222 ORTHO05D007677 1.8e-24 116.7 97 60.8
Aa31LG1G24920 Aethionema arabicum HOM05D006222 ORTHO05D007677 5.3e-24 115.2 120 48.3
BcaC02g12413 Brassica carinata HOM05D006222 ORTHO05D007677 5.3e-24 115.2 98 55.1
A05p03600 Brassica napus HOM05D006222 ORTHO05D007677 5.3e-24 115.2 98 54.1
BraA05t19346Z Brassica rapa HOM05D006222 ORTHO05D007677 5.3e-24 115.2 98 55.1
ClCG07G016700 Citrullus lanatus HOM05D006222 ORTHO05D007677 9.0e-24 114.4 97 59.8
Rhsim09G0036800 Rhododendron simsii HOM05D006222 ORTHO05D007677 9.0e-24 114.4 103 56.3
DCAR_027540 Daucus carota HOM05D006222 ORTHO05D007677 1.5e-23 113.6 100 53.0
C04p04200 Brassica napus HOM05D006222 ORTHO05D007677 2.0e-23 113.2 98 55.1
BolC4t22057H Brassica oleracea HOM05D006222 ORTHO05D007677 2.0e-23 113.2 98 55.1
TWI63G0082 Tripterygium wilfordii HOM05D006222 ORTHO05D007677 2.0e-23 113.2 105 56.2
AL401U10010 Arabidopsis lyrata HOM05D006222 ORTHO05D007677 2.6e-23 112.8 98 55.1
AL4G41770 Arabidopsis lyrata HOM05D006222 ORTHO05D007677 2.6e-23 112.8 98 55.1
CiPaw.02G058300 Carya illinoinensis HOM05D006222 ORTHO05D007677 2.6e-23 112.8 171 44.4
THA.LOC104804896 Tarenaya hassleriana HOM05D006222 ORTHO05D007677 2.6e-23 112.8 101 53.5
CsaV3_4G003830 Cucumis sativus L. HOM05D006222 ORTHO05D007677 3.4e-23 112.5 95 57.9
MELO3C017672.2 Cucumis melo HOM05D006222 ORTHO05D007677 4.5e-23 112.1 95 58.9
vmacro22720 Vaccinium macrocarpon HOM05D006222 ORTHO05D007677 5.8e-23 111.7 103 55.3
CARHR138180 Cardamine hirsuta HOM05D006222 ORTHO05D007677 7.6e-23 111.3 98 54.1
FvH4_4g11840 Fragaria vesca HOM05D006222 ORTHO05D007677 7.6e-23 111.3 95 58.9
Sp4g25240 Schrenkiella parvula HOM05D006222 ORTHO05D007677 7.6e-23 111.3 98 54.1
FAN17G0755 Fragaria x ananassa HOM05D006222 ORTHO05D007677 1.0e-22 110.9 94 59.6
FAN12G2296 Fragaria x ananassa HOM05D006222 ORTHO05D007677 1.3e-22 110.5 95 58.9
SGA_v2.0_scaffold31G12583 Striga asiatica HOM05D006222 ORTHO05D007677 1.3e-22 110.5 95 58.9
FvH4_6g25320 Fragaria vesca HOM05D006222 ORTHO05D007677 1.7e-22 110.2 94 58.5
AT2G43110 Arabidopsis thaliana HOM05D006222 ORTHO05D007677 2.2e-22 109.8 98 54.1
PGR083G0744 Punica granatum HOM05D006222 ORTHO05D007677 2.2e-22 109.8 98 58.2
Hund13303 Selenicereus undatus HOM05D006222 ORTHO05D007677 3.8e-22 109.0 103 52.4
CANSAT78G1479 Cannabis sativa HOM05D006222 ORTHO05D007677 4.9e-22 108.6 98 54.1
Carub.0004s2559 Capsella rubella HOM05D006222 ORTHO05D007677 4.9e-22 108.6 98 51.0
Aqoxy5G00038 Aquilegia oxysepala HOM05D006222 ORTHO05D007677 6.5e-22 108.2 94 54.3
EL10Ac5g11641 Beta vulgaris HOM05D006222 ORTHO05D007677 1.1e-21 107.5 96 53.1
Lj3P863T15 Lonicera japonica HOM05D006222 ORTHO05D007677 1.1e-21 107.5 97 59.8
RhsimUnG0147000 Rhododendron simsii HOM05D006222 ORTHO05D007677 2.5e-21 106.3 99 54.5
AUR62029129 Chenopodium quinoa HOM05D006222 ORTHO05D007677 4.2e-21 105.5 96 53.1
Eucgr.A00219 Eucalyptus grandis HOM05D006222 ORTHO05D007677 4.2e-21 105.5 98 54.1
BcaNung03540 Brassica carinata HOM05D006222 ORTHO05D007677 5.5e-21 105.1 98 52.0
Cc03_g10460 Coffea canephora HOM05D006222 ORTHO05D007677 5.5e-21 105.1 94 56.4
MD13G1276400 Malus domestica HOM05D006222 ORTHO05D007677 5.5e-21 105.1 98 56.1
CDE05G2371 Ceratophyllum demersum HOM05D006222 ORTHO05D007677 1.2e-20 104.0 101 48.5
Lsat_1_v5_gn_2_38021 Lactuca sativa HOM05D006222 ORTHO05D007677 2.1e-20 103.2 105 53.3
Nn3g20171 Nelumbo nucifera HOM05D006222 ORTHO05D007677 2.1e-20 103.2 101 52.5
Rhsim04G0094000 Rhododendron simsii HOM05D006222 ORTHO05D007677 2.1e-20 103.2 180 38.9
SalBow3G0382 Salvia bowleyana HOM05D006222 ORTHO05D007677 2.7e-20 102.8 104 51.0
CSS0005997 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 4.6e-20 102.1 172 53.5
CSS0002349 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 6.0e-20 101.7 172 53.5
CDE05G0624 Ceratophyllum demersum HOM05D006222 ORTHO05D007677 6.0e-20 101.7 101 45.5
Eucgr.L00544 Eucalyptus grandis HOM05D006222 ORTHO05D007677 6.0e-20 101.7 98 53.1
FAN12G2611 Fragaria x ananassa HOM05D006222 ORTHO05D007677 6.0e-20 101.7 109 51.4
Glyma.20G248400 Glycine max HOM05D006222 ORTHO05D007677 2.3e-19 99.8 85 61.2
HanXRQChr14g0432081 Helianthus annuus HOM05D006222 ORTHO05D007677 1.1e-18 97.4 94 50.0
Ca_11418_v3 Cicer arietinum L. HOM05D006222 ORTHO05D007677 1.5e-18 97.1 97 53.6
ECA232G0640 Erigeron canadensis HOM05D006222 ORTHO05D007677 3.3e-18 95.9 93 52.7
Nitab4.5_0000161g0130 Nicotiana tabacum HOM05D006222 ORTHO05D007677 3.3e-18 95.9 94 52.1
ATR1089G038 Amborella trichopoda HOM05D006222 ORTHO05D007677 4.3e-18 95.5 100 46.0
Zm00001eb086320 Zea mays HOM05D006222 ORTHO05D007677 5.7e-18 95.1 95 47.4
Os04g0348100 Oryza sativa ssp. japonica HOM05D006222 ORTHO05D007677 1.3e-17 94.0 95 47.4
Phvul.007G002100 Phaseolus vulgaris HOM05D006222 ORTHO05D007677 1.6e-17 93.6 87 54.0
arahy.Tifrunner.gnm1.ann1.VRQF1E Arachis hypogaea HOM05D006222 ORTHO05D007677 2.1e-17 93.2 98 51.0
Ah.12g062130 Amaranthus hybridus HOM05D006222 ORTHO05D007677 2.8e-17 92.8 96 52.1
arahy.Tifrunner.gnm1.ann1.S0FJR3 Arachis hypogaea HOM05D006222 ORTHO05D007677 2.8e-17 92.8 100 50.0
Solyc05g053880.4 Solanum lycopersicum HOM05D006222 ORTHO05D007677 3.7e-17 92.4 101 48.5
PGSC0003DMG400013073 Solanum tuberosum HOM05D006222 ORTHO05D007677 4.8e-17 92.0 94 51.1
Medtr1g116820 Medicago truncatula HOM05D006222 ORTHO05D007677 6.2e-17 91.7 105 49.5
Sopen05g032350 Solanum pennellii HOM05D006222 ORTHO05D007677 1.1e-16 90.9 94 51.1
Migut.N00436 Erythranthe guttata HOM05D006222 ORTHO05D007677 2.4e-16 89.7 100 46.0
VMungo0720G0284 Vigna mungo HOM05D006222 ORTHO05D007677 3.1e-16 89.4 87 50.6
Psat0s4086g0080 Pisum sativum HOM05D006222 ORTHO05D007677 2.0e-15 86.7 97 46.4
Lj5g0022978 Lotus japonicus HOM05D006222 ORTHO05D007677 5.8e-15 85.1 98 51.0
MSTRG.24605 Avicennia marina HOM05D006222 ORTHO05D007677 2.2e-14 83.2 98 45.9
Hma1.2p1_1477F.1_g285900 Hydrangea macrophylla HOM05D006222 ORTHO05D007677 1.9e-13 80.1 65 53.8
TPR.G8895 Trifolium pratense HOM05D006222 ORTHO05D007677 2.7e-12 76.3 107 44.9
AUR62014992 Chenopodium quinoa HOM05D006222 ORTHO05D007677 3.9e-11 72.4 58 53.4
Actinidia32943 Actinidia chinensis HOM05D006222 ORTHO05D007677 5.1e-11 72.0 64 54.7
Nitab4.5_0007578g0020 Nicotiana tabacum HOM05D006222 ORTHO05D007677 6.7e-11 71.6 94 41.5
Pp3c6_17250 Physcomitrium patens HOM05D006222 ORTHO05D007677 4.3e-10 68.9 96 39.6
unitig_578.g15951 Utricularia gibba HOM05D006222 ORTHO05D007677 9.7e-10 67.8 97 42.3
FAN05G2938 Fragaria x ananassa HOM05D006222 ORTHO05D007677 1.1e-08 64.3 47 57.4
SMO331G0016 Selaginella moellendorffii HOM05D006222 ORTHO05D007677 4.1e-08 62.4 96 35.4
Peaxi162Scf00423g00727 Petunia axillaris HOM05D006222 ORTHO05D007677 4.5e-07 58.9 65 47.7
PGSC0003DMG400023306 Solanum tuberosum HOM05D006222 ORTHO05D007677 4.5e-07 58.9 63 49.2
CAN.G1310.8 Capsicum annuum HOM05D006222 ORTHO05D007677 1.3e-06 57.4 63 44.4
CBR_g19109 Chara braunii HOM05D006222 ORTHO05D007677 2.9e-06 56.2 123 33.3
BcaC01g05263 Brassica carinata HOM05D006222 ORTHO05D007677 3.8e-06 55.8 44 59.1
Ah.12g060860 Amaranthus hybridus HOM05D006222 ORTHO05D007677 6.5e-06 55.1 96 36.5


User provided reference genes

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