Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib268G0228 Durio zibethinus HOM05D004577 ORTHO05D005062 1.8e-45 185.7 99 100.0
Duzib187G1448 Durio zibethinus HOM05D004577 ORTHO05D005062 4.9e-35 151.0 97 83.5
Thecc.07G153300 Theobroma cacao HOM05D004577 ORTHO05D005062 5.0e-32 141.0 98 80.6
Duzib213G0774 Durio zibethinus HOM05D004577 ORTHO05D005062 4.3e-31 137.9 95 83.2
Gohir.D07G172500 Gossypium hirsutum HOM05D004577 ORTHO05D005062 6.4e-27 124.0 95 70.5
Gohir.D09G118900 Gossypium hirsutum HOM05D004577 ORTHO05D005062 6.4e-27 124.0 95 70.5
Gohir.A01G038700 Gossypium hirsutum HOM05D004577 ORTHO05D005062 2.4e-26 122.1 95 70.5
Gorai.001G244300 Gossypium raimondii HOM05D004577 ORTHO05D005062 9.2e-26 120.2 96 69.8
Gorai.002G035900 Gossypium raimondii HOM05D004577 ORTHO05D005062 2.7e-25 118.6 97 68.0
Gohir.A01G038800 Gossypium hirsutum HOM05D004577 ORTHO05D005062 1.7e-24 115.9 95 67.4
Gohir.D11G274650 Gossypium hirsutum HOM05D004577 ORTHO05D005062 6.6e-24 114.0 76 76.3
Gohir.D12G083501 Gossypium hirsutum HOM05D004577 ORTHO05D005062 1.9e-23 112.5 96 66.7
Gorai.001G066700 Gossypium raimondii HOM05D004577 ORTHO05D005062 3.4e-20 101.7 91 64.8
Gorai.N025400 Gossypium raimondii HOM05D004577 ORTHO05D005062 8.9e-13 77.0 69 62.3
Manes.01G021500 Manihot esculenta HOM05D004577 ORTHO05D005062 7.5e-12 73.9 107 47.7
Manes.05G118000 Manihot esculenta HOM05D004577 ORTHO05D005062 8.3e-11 70.5 109 45.0
PGR004G1013 Punica granatum HOM05D004577 ORTHO05D005062 2.4e-10 68.9 106 43.4
Potri.011G163900 Populus trichocarpa HOM05D004577 ORTHO05D005062 9.2e-10 67.0 85 49.4
Prupe.6G028300 Prunus persica HOM05D004577 ORTHO05D005062 9.2e-10 67.0 105 48.6
Sabra11G0141000 Salix brachista HOM05D002312 ORTHO05D006455 4.6e-09 64.7 72 54.2
AL1G64510 Arabidopsis lyrata HOM05D004577 ORTHO05D005062 2.3e-08 62.4 95 46.3
FAN11G1489 Fragaria x ananassa HOM05D004577 ORTHO05D005062 3.9e-08 61.6 105 45.7
FAN21G3744 Fragaria x ananassa HOM05D004577 ORTHO05D005062 3.9e-08 61.6 105 44.8
Eucgr.E00269 Eucalyptus grandis HOM05D004577 ORTHO05D005062 1.5e-07 59.7 62 61.3
FvH4_3g42270 Fragaria vesca HOM05D004577 ORTHO05D005062 2.5e-07 58.9 105 43.8
Gohir.A04G049900 Gossypium hirsutum HOM05D004577 ORTHO05D005062 2.5e-07 58.9 31 93.5
RcHm_v2.0_Chr5g0075591 Rosa chinensis HOM05D004577 ORTHO05D005062 3.3e-07 58.5 109 43.1
FAN25G2651 Fragaria x ananassa HOM05D004577 ORTHO05D005062 4.3e-07 58.2 105 43.8
AT1G56200 Arabidopsis thaliana HOM05D004577 ORTHO05D005062 9.5e-07 57.0 95 41.1
MD03G1035300 Malus domestica HOM05D004577 ORTHO05D005062 2.1e-06 55.8 102 42.2
Sopen08g002020 Solanum pennellii HOM05D004577 ORTHO05D005062 2.1e-06 55.8 96 39.6
BolC4t23212H Brassica oleracea HOM05D004577 ORTHO05D005062 2.8e-06 55.5 99 46.5
BcaNung05263 Brassica carinata HOM05D004577 ORTHO05D005062 3.6e-06 55.1 61 52.5
FAN16G3679 Fragaria x ananassa HOM05D004577 ORTHO05D005062 3.6e-06 55.1 105 42.9
Aa31LG10G60 Aethionema arabicum HOM05D004577 ORTHO05D005062 4.7e-06 54.7 62 54.8
CSS0048553 Camellia sinensis var. sinensis HOM05D004577 ORTHO05D005062 4.7e-06 54.7 93 41.9
Carub.0001s4488 Capsella rubella HOM05D004577 ORTHO05D005062 4.7e-06 54.7 97 42.3
Ciclev10009709m.g Citrus clementina HOM05D004577 ORTHO05D005062 4.7e-06 54.7 71 52.1
Gohir.D11G326600 Gossypium hirsutum HOM05D004577 ORTHO05D005062 6.2e-06 54.3 28 92.9
PGSC0003DMG400014846 Solanum tuberosum HOM05D004577 ORTHO05D005062 6.2e-06 54.3 99 42.4
TWI38G1007 Tripterygium wilfordii HOM05D004577 ORTHO05D005062 6.2e-06 54.3 109 40.4


User provided reference genes

Program Settings