Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib268G0147 Durio zibethinus HOM05D006138 ORTHO05D007778 3.9e-70 268.1 143 100.0
Duzib268G0476 Durio zibethinus HOM05D006138 ORTHO05D007778 2.0e-66 255.8 140 97.1
Thecc.04G198400 Theobroma cacao HOM05D006138 ORTHO05D007778 1.6e-47 193.0 142 73.9
Gohir.A05G323100 Gossypium hirsutum HOM05D006138 ORTHO05D007778 2.3e-46 189.1 134 76.1
Gohir.D05G326000 Gossypium hirsutum HOM05D006138 ORTHO05D007778 2.6e-45 185.7 134 75.4
Gohir.D12G210200 Gossypium hirsutum HOM05D006138 ORTHO05D007778 2.6e-45 185.7 134 75.4
Gorai.009G350500 Gossypium raimondii HOM05D006138 ORTHO05D007778 2.6e-45 185.7 134 75.4
Gohir.A12G078622 Gossypium hirsutum HOM05D006138 ORTHO05D007778 1.7e-44 183.0 134 74.6
COL.COLO4_20197 Corchorus olitorius HOM05D006138 ORTHO05D007778 1.1e-40 170.2 135 71.9
Cpa.g.sc83.29 Carica papaya HOM05D006138 ORTHO05D007778 1.3e-25 120.2 140 50.7
Cfa014952 Carpinus fangiana HOM05D006138 ORTHO05D007778 8.6e-25 117.5 134 52.2
CiPaw.02G065100 Carya illinoinensis HOM05D006138 ORTHO05D007778 1.1e-24 117.1 125 51.2
Atru.chr4.1604 Acer truncatum HOM05D006138 ORTHO05D007778 3.3e-24 115.5 134 53.0
Rhsim02G0060900 Rhododendron simsii HOM05D006138 ORTHO05D007778 4.3e-24 115.2 121 50.4
Actinidia38756 Actinidia chinensis HOM05D006138 ORTHO05D007778 1.2e-23 113.6 118 52.5
RhsimUnG0035600 Rhododendron simsii HOM05D006138 ORTHO05D007778 1.6e-23 113.2 118 50.8
Dinv27208 Davidia involucrata HOM05D006138 ORTHO05D007778 8.0e-23 110.9 118 50.0
Potri.001G317900 Populus trichocarpa HOM05D006138 ORTHO05D007778 1.8e-22 109.8 133 52.6
THA.LOC104804805 Tarenaya hassleriana HOM05D006138 ORTHO05D007778 3.1e-22 109.0 136 47.1
TAR362G0162 Trochodendron aralioides HOM05D006138 ORTHO05D007778 3.1e-22 109.0 121 47.9
Carub.0003s2421 Capsella rubella HOM05D006138 ORTHO05D007778 3.7e-20 102.1 124 44.4
Sabra16G0201200 Salix brachista HOM05D006138 ORTHO05D007778 4.9e-20 101.7 139 49.6
Nn1g00061 Nelumbo nucifera HOM05D006138 ORTHO05D007778 6.4e-20 101.3 118 47.5
Nn1g07955 Nelumbo nucifera HOM05D006138 ORTHO05D007778 6.4e-20 101.3 118 47.5
Hma1.2p1_0017F.1_g011170 Hydrangea macrophylla HOM05D006138 ORTHO05D007778 8.3e-20 100.9 117 48.7
vmacro15557 Vaccinium macrocarpon HOM05D006138 ORTHO05D007778 1.9e-19 99.8 121 47.9
TWI09G0334 Tripterygium wilfordii HOM05D006138 ORTHO05D007778 2.4e-19 99.4 137 44.5
AL3G38900 Arabidopsis lyrata HOM05D006138 ORTHO05D007778 3.2e-19 99.0 118 45.8
Lj6A392G25 Lonicera japonica HOM05D006138 ORTHO05D007778 4.1e-19 98.6 117 45.3
Sp3g21610 Schrenkiella parvula HOM05D006138 ORTHO05D007778 5.4e-19 98.2 124 42.7
GSVIVG01020999001 Vitis vinifera HOM05D006138 ORTHO05D007778 1.6e-18 96.7 121 43.0
CsaV3_3G010820 Cucumis sativus L. HOM05D006138 ORTHO05D007778 7.8e-18 94.4 128 44.5
TWI53G0419 Tripterygium wilfordii HOM05D006138 ORTHO05D007778 7.8e-18 94.4 137 43.1
MELO3C006299.2 Cucumis melo HOM05D006138 ORTHO05D007778 3.0e-17 92.4 128 43.8
CANSAT78G1344 Cannabis sativa HOM05D006138 ORTHO05D007778 1.5e-16 90.1 107 45.8
CANSAT78G2425 Cannabis sativa HOM05D006138 ORTHO05D007778 1.5e-16 90.1 107 45.8
Lj6g0009885 Lotus japonicus HOM05D006138 ORTHO05D007778 1.9e-16 89.7 133 41.4
QL10p052654 Quercus lobata HOM05D006138 ORTHO05D007778 5.6e-16 88.2 138 43.5
RcHm_v2.0_Chr4g0414021 Rosa chinensis HOM05D006138 ORTHO05D007778 9.5e-16 87.4 117 40.2
Lsat_1_v5_gn_6_60661 Lactuca sativa HOM05D006138 ORTHO05D007778 3.6e-15 85.5 125 41.6
Aa31LG8G10490 Aethionema arabicum HOM05D006138 ORTHO05D007778 4.7e-15 85.1 132 40.9
AT3G23910 Arabidopsis thaliana HOM05D006138 ORTHO05D007778 6.2e-15 84.7 118 42.4
AUR62018570 Chenopodium quinoa HOM05D006138 ORTHO05D007778 8.1e-15 84.3 131 42.7
Manes.15G055900 Manihot esculenta HOM05D006138 ORTHO05D007778 8.1e-15 84.3 81 53.1
Eucgr.H00039 Eucalyptus grandis HOM05D006138 ORTHO05D007778 1.1e-14 84.0 117 41.9
MD04G1014100 Malus domestica HOM05D006138 ORTHO05D007778 1.8e-14 83.2 127 39.4
FvH4_4g13460 Fragaria vesca HOM05D006138 ORTHO05D007778 3.1e-14 82.4 128 37.5
FAN12G1205 Fragaria x ananassa HOM05D006138 ORTHO05D007778 3.1e-14 82.4 128 37.5
Prupe.1G161100 Prunus persica HOM05D006138 ORTHO05D007778 3.1e-14 82.4 129 41.1
FAN07G2199 Fragaria x ananassa HOM05D006138 ORTHO05D007778 4.0e-14 82.0 95 45.3
Lj6A407G21 Lonicera japonica HOM05D006138 ORTHO05D007778 5.2e-14 81.6 131 39.7
AUR62020846 Chenopodium quinoa HOM05D006138 ORTHO05D007778 8.9e-14 80.9 130 40.8
Sed0019269 Sechium edule HOM05D006138 ORTHO05D007778 1.5e-13 80.1 128 41.4
FAN17G0457 Fragaria x ananassa HOM05D006138 ORTHO05D007778 2.6e-13 79.3 138 34.1
Psat5g102360 Pisum sativum HOM05D006138 ORTHO05D007778 2.6e-13 79.3 103 41.7
Hund24401 Selenicereus undatus HOM05D006138 ORTHO05D007778 3.4e-13 79.0 130 43.1
Solyc09g092180.3 Solanum lycopersicum HOM05D006138 ORTHO05D007778 3.4e-13 79.0 114 38.6
Sopen09g035050 Solanum pennellii HOM05D006138 ORTHO05D007778 4.4e-13 78.6 114 38.6
arahy.Tifrunner.gnm1.ann1.HYZ2KB Arachis hypogaea HOM05D006138 ORTHO05D007778 5.8e-13 78.2 134 35.8
HanXRQChr07g0185891 Helianthus annuus HOM05D006138 ORTHO05D007778 5.8e-13 78.2 119 38.7
Peaxi162Scf00047g00230 Petunia axillaris HOM05D006138 ORTHO05D007778 7.5e-13 77.8 131 37.4
arahy.Tifrunner.gnm1.ann1.3M33GA Arachis hypogaea HOM05D006138 ORTHO05D007778 2.9e-12 75.9 134 35.8
FAN22G1553 Fragaria x ananassa HOM05D006138 ORTHO05D007778 2.9e-12 75.9 128 34.4
Ca_16395_v3 Cicer arietinum L. HOM05D006138 ORTHO05D007778 3.7e-12 75.5 125 38.4
Sc13g0000300 Simmondsia chinensis HOM05D006138 ORTHO05D007778 6.4e-12 74.7 131 38.2
Oeu025031.1 Olea europaea HOM05D006138 ORTHO05D007778 8.3e-12 74.3 135 37.0
ClCG05G003180 Citrullus lanatus HOM05D006138 ORTHO05D007778 1.1e-11 73.9 84 50.0
BcaC06g35587 Brassica carinata HOM05D006138 ORTHO05D007778 3.2e-11 72.4 115 35.7
Nitab4.5_0000401g0220 Nicotiana tabacum HOM05D006138 ORTHO05D007778 3.2e-11 72.4 131 35.9
AT3G24255 Arabidopsis thaliana HOM05D006138 ORTHO05D007778 4.1e-11 72.0 114 39.5
BcaB06g26554 Brassica carinata HOM05D006138 ORTHO05D007778 5.4e-11 71.6 115 36.5
Eucgr.L02926 Eucalyptus grandis HOM05D006138 ORTHO05D007778 5.4e-11 71.6 118 39.0
C07p13230 Brassica napus HOM05D006138 ORTHO05D007778 1.2e-10 70.5 130 32.3
A07p08490 Brassica napus HOM05D006138 ORTHO05D007778 2.7e-10 69.3 118 35.6
PSO017G1394 Papaver somniferum HOM05D006138 ORTHO05D007778 1.3e-09 67.0 129 38.0
EL10Ac3g07466 Beta vulgaris HOM05D006138 ORTHO05D007778 3.0e-09 65.9 112 37.5
PSO063G4547 Papaver somniferum HOM05D006138 ORTHO05D007778 3.0e-09 65.9 129 37.2
DCAR_026640 Daucus carota HOM05D006138 ORTHO05D007778 5.1e-09 65.1 103 38.8
PGR004G2157 Punica granatum HOM05D006138 ORTHO05D007778 5.1e-09 65.1 120 37.5
Haze_11642 Corylus avellana HOM05D006138 ORTHO05D007778 6.6e-09 64.7 134 37.3
BolC7t41815H Brassica oleracea HOM05D006138 ORTHO05D007778 1.5e-08 63.5 137 30.7
BraA07t28634Z Brassica rapa HOM05D006138 ORTHO05D007778 2.5e-08 62.8 122 36.1
Cc03_g08330 Coffea canephora HOM05D006138 ORTHO05D007778 4.3e-08 62.0 127 33.9
ECA233G3278 Erigeron canadensis HOM05D006138 ORTHO05D007778 9.5e-08 60.8 125 32.0
Nitab4.5_0001652g0120 Nicotiana tabacum HOM05D006138 ORTHO05D007778 1.6e-07 60.1 94 35.1
CAN.G1565.12 Capsicum annuum HOM05D006138 ORTHO05D007778 2.1e-07 59.7 81 38.3
Ciclev10006864m.g Citrus clementina HOM05D006138 ORTHO05D007778 3.6e-07 58.9 62 53.2
Migut.G00745 Erythranthe guttata HOM05D006138 ORTHO05D007778 3.6e-07 58.9 133 30.1
PGSC0003DMG400026422 Solanum tuberosum HOM05D006138 ORTHO05D007778 3.6e-07 58.9 81 38.3
SalBow8G0822 Salvia bowleyana HOM05D006138 ORTHO05D007778 1.4e-06 57.0 118 34.7
SalBow8G2056 Salvia bowleyana HOM05D006138 ORTHO05D007778 1.4e-06 57.0 118 34.7
Nitab4.5_0003101g0010 Nicotiana tabacum HOM05D006138 ORTHO05D007778 3.1e-06 55.8 131 34.4
MSTRG.9735 Avicennia marina HOM05D006138 ORTHO05D007778 4.0e-06 55.5 142 31.0
Thhalv10002763m.g Eutrema salsugineum HOM05D006138 ORTHO05D007778 6.8e-06 54.7 63 41.3


User provided reference genes

Program Settings