Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib266G0003 Durio zibethinus HOM05D004244 ORTHO05D004964 1.7e-91 339.3 177 100.0
Duzib052G0780 Durio zibethinus HOM05D004244 ORTHO05D004964 8.6e-83 310.5 176 94.3
Duzib151G0660 Durio zibethinus HOM05D004244 ORTHO05D004964 5.6e-50 201.4 159 75.5
COL.COLO4_16006 Corchorus olitorius HOM05D004244 ORTHO05D004964 8.1e-49 197.6 158 69.6
Thecc.04G269100 Theobroma cacao HOM05D004244 ORTHO05D004964 3.8e-46 188.7 176 63.6
Gohir.A09G231200 Gossypium hirsutum HOM05D004244 ORTHO05D004964 7.3e-42 174.5 161 65.8
Gohir.D09G232300 Gossypium hirsutum HOM05D004244 ORTHO05D004964 2.1e-41 172.9 162 64.8
Gorai.006G255200 Gossypium raimondii HOM05D004244 ORTHO05D004964 1.1e-40 170.6 161 64.6
Duzib052G0270 Durio zibethinus HOM05D004244 ORTHO05D004964 2.5e-26 122.9 76 86.8
Nn1g03029 Nelumbo nucifera HOM05D004244 ORTHO05D004964 2.5e-21 106.3 128 46.9
FAN12G2846 Fragaria x ananassa HOM05D004244 ORTHO05D004964 4.2e-21 105.5 184 39.7
GSVIVG01001856001 Vitis vinifera HOM05D004244 ORTHO05D004964 1.2e-20 104.0 173 42.2
Medtr1g045520 Medicago truncatula HOM05D004244 ORTHO05D004964 1.6e-20 103.6 66 71.2
Glyma.10G132400 Glycine max HOM05D004244 ORTHO05D004964 2.1e-20 103.2 158 42.4
Prupe.1G052600 Prunus persica HOM05D004244 ORTHO05D004964 2.1e-20 103.2 130 45.4
FAN17G1122 Fragaria x ananassa HOM05D004244 ORTHO05D004964 3.5e-20 102.4 185 38.4
FvH4_4g05190 Fragaria vesca HOM05D004244 ORTHO05D004964 4.6e-20 102.1 184 38.6
Nn3g19830 Nelumbo nucifera HOM05D004244 ORTHO05D004964 4.6e-20 102.1 134 44.8
TWI09G1213 Tripterygium wilfordii HOM05D004244 ORTHO05D004964 4.6e-20 102.1 120 46.7
Dinv27132 Davidia involucrata HOM05D004244 ORTHO05D004964 1.0e-19 100.9 113 50.4
MSTRG.24646 Avicennia marina HOM05D004244 ORTHO05D004964 1.8e-19 100.1 96 54.2
Phvul.007G227000 Phaseolus vulgaris HOM05D004244 ORTHO05D004964 2.3e-19 99.8 115 45.2
TAR362G0565 Trochodendron aralioides HOM05D004244 ORTHO05D004964 2.3e-19 99.8 144 43.1
CANSAT78G2336 Cannabis sativa HOM05D004244 ORTHO05D004964 5.1e-19 98.6 150 43.3
arahy.Tifrunner.gnm1.ann1.QYR710 Arachis hypogaea HOM05D004244 ORTHO05D004964 2.5e-18 96.3 144 41.0
Lalb_Chr03g0036891 Lupinus albus HOM05D004244 ORTHO05D004964 2.5e-18 96.3 114 47.4
MD13G1225800 Malus domestica HOM05D004244 ORTHO05D004964 2.5e-18 96.3 159 39.6
arahy.Tifrunner.gnm1.ann1.9VYP7U Arachis hypogaea HOM05D004244 ORTHO05D004964 4.3e-18 95.5 145 40.7
Cc03_g06840 Coffea canephora HOM05D004244 ORTHO05D004964 5.7e-18 95.1 116 48.3
ECA238G3737 Erigeron canadensis HOM05D004244 ORTHO05D004964 5.7e-18 95.1 97 48.5
Aqoxy5G00098 Aquilegia oxysepala HOM05D004244 ORTHO05D004964 7.4e-18 94.7 119 42.9
CsaV3_2G012190 Cucumis sativus L. HOM05D004244 ORTHO05D004964 7.4e-18 94.7 131 47.3
Nitab4.5_0000451g0020 Nicotiana tabacum HOM05D004244 ORTHO05D004964 7.4e-18 94.7 99 52.5
Eucgr.H02883 Eucalyptus grandis HOM05D004244 ORTHO05D004964 9.6e-18 94.4 64 65.6
CiPaw.01G175300 Carya illinoinensis HOM05D004244 ORTHO05D004964 1.3e-17 94.0 188 35.1
MELO3C023072.2 Cucumis melo HOM05D004244 ORTHO05D004964 1.3e-17 94.0 114 49.1
MBI07_g19046_MAGBIO Magnolia biondii HOM05D004244 ORTHO05D004964 1.3e-17 94.0 109 48.6
MD16G1230800 Malus domestica HOM05D004244 ORTHO05D004964 1.6e-17 93.6 154 37.7
PGR004G0368 Punica granatum HOM05D004244 ORTHO05D004964 2.1e-17 93.2 165 39.4
Cfa014824 Carpinus fangiana HOM05D004244 ORTHO05D004964 2.8e-17 92.8 75 60.0
Lsat_1_v5_gn_2_42020 Lactuca sativa HOM05D004244 ORTHO05D004964 2.8e-17 92.8 111 45.9
TPR.G23981 Trifolium pratense HOM05D004244 ORTHO05D004964 6.2e-17 91.7 173 36.4
Lj6g0017438 Lotus japonicus HOM05D004244 ORTHO05D004964 1.4e-16 90.5 111 45.9
Nitab4.5_0000867g0080 Nicotiana tabacum HOM05D004244 ORTHO05D004964 1.8e-16 90.1 98 50.0
Psat1g024120 Pisum sativum HOM05D004244 ORTHO05D004964 1.8e-16 90.1 66 60.6
Ca_11893_v3 Cicer arietinum L. HOM05D004244 ORTHO05D004964 4.1e-16 89.0 66 59.1
Migut.N00322 Erythranthe guttata HOM05D004244 ORTHO05D004964 4.1e-16 89.0 97 47.4
TAR633G1781 Trochodendron aralioides HOM05D004244 ORTHO05D004964 4.1e-16 89.0 137 40.1
Peaxi162Scf00125g01118 Petunia axillaris HOM05D004244 ORTHO05D004964 5.3e-16 88.6 96 52.1
QL06p021978 Quercus lobata HOM05D004244 ORTHO05D004964 5.3e-16 88.6 75 58.7
Hma1.2p1_0112F.1_g054970 Hydrangea macrophylla HOM05D004244 ORTHO05D004964 1.2e-15 87.4 117 42.7
Actinidia11381 Actinidia chinensis HOM05D004244 ORTHO05D004964 2.6e-15 86.3 62 64.5
SalBow3G0496 Salvia bowleyana HOM05D004244 ORTHO05D004964 2.6e-15 86.3 96 51.0
SalBow3G1459 Salvia bowleyana HOM05D004244 ORTHO05D004964 2.6e-15 86.3 96 51.0
Sed0027895 Sechium edule HOM05D004244 ORTHO05D004964 2.6e-15 86.3 110 45.5
Cpa.g.sc59.37 Carica papaya HOM05D004244 ORTHO05D004964 3.4e-15 85.9 78 56.4
Manes.03G156200 Manihot esculenta HOM05D004244 ORTHO05D004964 4.5e-15 85.5 184 37.0
PSO674G0105 Papaver somniferum HOM05D004244 ORTHO05D004964 5.8e-15 85.1 172 33.7
Atru.chr4.1873 Acer truncatum HOM05D004244 ORTHO05D004964 7.6e-15 84.7 148 37.2
EL10Ac3g06716 Beta vulgaris HOM05D004244 ORTHO05D004964 7.6e-15 84.7 170 35.9
Actinidia39939 Actinidia chinensis HOM05D004244 ORTHO05D004964 1.0e-14 84.3 91 49.5
PSO170G0851 Papaver somniferum HOM05D004244 ORTHO05D004964 6.5e-14 81.6 165 33.9
Actinidia38930 Actinidia chinensis HOM05D004244 ORTHO05D004964 1.9e-13 80.1 126 39.7
HPP92_025817 Vanilla planifolia HOM05D004244 ORTHO05D004964 2.5e-13 79.7 127 40.2
CDE11G0045 Ceratophyllum demersum HOM05D004244 ORTHO05D004964 5.5e-13 78.6 112 39.3
Potri.010G063300 Populus trichocarpa HOM05D004244 ORTHO05D004964 1.2e-12 77.4 138 37.7
Actinidia34761 Actinidia chinensis HOM05D004244 ORTHO05D004964 2.1e-12 76.6 149 31.5
PGSC0003DMG402001493 Solanum tuberosum HOM05D004244 ORTHO05D004964 2.7e-12 76.3 150 39.3
ClCG06G007490 Citrullus lanatus HOM05D004244 ORTHO05D004964 7.9e-12 74.7 119 41.2
Hund24865 Selenicereus undatus HOM05D004244 ORTHO05D004964 2.3e-11 73.2 59 57.6
VMungo0720G2410 Vigna mungo HOM05D004244 ORTHO05D004964 2.3e-11 73.2 48 66.7
Sopen09g033990 Solanum pennellii HOM05D004244 ORTHO05D004964 3.9e-11 72.4 153 37.9
Hma1.2p1_0130F.1_g060490 Hydrangea macrophylla HOM05D004244 ORTHO05D004964 5.1e-11 72.0 135 38.5
Medtr4g088590 Medicago truncatula HOM05D004244 ORTHO05D004964 5.1e-11 72.0 48 66.7
Solyc09g091010.3 Solanum lycopersicum HOM05D004244 ORTHO05D004964 5.1e-11 72.0 153 37.3
SGA_v2.0_scaffold398G50771 Striga asiatica HOM05D004244 ORTHO05D004964 5.1e-11 72.0 85 50.6
Rhsim09G0132600 Rhododendron simsii HOM05D004244 ORTHO05D004964 6.7e-11 71.6 134 37.3
Haze_11497 Corylus avellana HOM05D004244 ORTHO05D004964 8.7e-11 71.2 56 62.5
unitig_26.g9547 Utricularia gibba HOM05D004244 ORTHO05D004964 1.1e-10 70.9 63 57.1
BcaB06g28663 Brassica carinata HOM05D006155 ORTHO05D007529 3.3e-10 69.3 87 41.4
Migut.F02055 Erythranthe guttata HOM05D004244 ORTHO05D004964 3.3e-10 69.3 75 44.0
Sc19g0005660 Simmondsia chinensis HOM05D004244 ORTHO05D004964 4.3e-10 68.9 78 47.4
A04p25560 Brassica napus HOM05D004244 ORTHO05D004964 5.7e-10 68.6 67 47.8
SalBow1G0411 Salvia bowleyana HOM05D004244 ORTHO05D004964 5.7e-10 68.6 60 50.0
Sp4g15550 Schrenkiella parvula HOM05D004244 ORTHO05D004964 5.7e-10 68.6 67 47.8
BcaC02g07850 Brassica carinata HOM05D004244 ORTHO05D004964 7.4e-10 68.2 86 41.9
BraA04t18060Z Brassica rapa HOM05D006155 ORTHO05D007529 7.4e-10 68.2 79 44.3
Sc09g0001820 Simmondsia chinensis HOM05D004244 ORTHO05D004964 9.7e-10 67.8 139 31.7
AT2G33250 Arabidopsis thaliana HOM05D004244 ORTHO05D004964 1.3e-09 67.4 57 52.6
Oeu010184.1 Olea europaea HOM05D004244 ORTHO05D004964 1.3e-09 67.4 60 50.0
Zm00001eb360230 Zea mays HOM05D004244 ORTHO05D004964 1.6e-09 67.0 87 44.8
Aa31LG5G4140 Aethionema arabicum HOM05D004244 ORTHO05D004964 2.2e-09 66.6 57 52.6
Nitab4.5_0000841g0060 Nicotiana tabacum HOM05D004244 ORTHO05D004964 2.2e-09 66.6 73 39.7
ATR0723G041 Amborella trichopoda HOM05D004244 ORTHO05D004964 2.8e-09 66.2 46 63.0
Gohir.D11G254600 Gossypium hirsutum HOM05D004244 ORTHO05D004964 2.8e-09 66.2 64 46.9
Gorai.007G273200 Gossypium raimondii HOM05D004244 ORTHO05D004964 2.8e-09 66.2 64 46.9
GSVIVG01026322001 Vitis vinifera HOM05D004244 ORTHO05D004964 3.7e-09 65.9 58 50.0
Zm00001eb156930 Zea mays HOM05D004244 ORTHO05D004964 3.7e-09 65.9 66 50.0
BcaC02g07847 Brassica carinata HOM05D004244 ORTHO05D004964 4.8e-09 65.5 157 31.2
CARHR127250 Cardamine hirsuta HOM05D004244 ORTHO05D004964 4.8e-09 65.5 57 52.6
Manes.08G141600 Manihot esculenta HOM05D004244 ORTHO05D004964 4.8e-09 65.5 85 42.4
Nitab4.5_0008594g0020 Nicotiana tabacum HOM05D004244 ORTHO05D004964 4.8e-09 65.5 73 41.1
C04p62700 Brassica napus HOM05D006155 ORTHO05D007529 8.2e-09 64.7 155 31.6
BolC4t27754H Brassica oleracea HOM05D006155 ORTHO05D007529 8.2e-09 64.7 155 31.6
Eucgr.B01738 Eucalyptus grandis HOM05D004244 ORTHO05D004964 8.2e-09 64.7 75 42.7
Atru.chr2.1111 Acer truncatum HOM05D004244 ORTHO05D004964 1.1e-08 64.3 121 38.8
MSTRG.9217 Avicennia marina HOM05D004244 ORTHO05D004964 1.4e-08 63.9 60 43.3
Ciclev10005346m.g Citrus clementina HOM05D004244 ORTHO05D004964 1.4e-08 63.9 59 52.5
COL.COLO4_15535 Corchorus olitorius HOM05D004244 ORTHO05D004964 1.4e-08 63.9 96 37.5
Thhalv10017015m.g Eutrema salsugineum HOM05D004244 ORTHO05D004964 1.8e-08 63.5 67 44.8
Carub.0004s1471 Capsella rubella HOM05D004244 ORTHO05D004964 2.4e-08 63.2 74 45.9
AL4G28880 Arabidopsis lyrata HOM05D004244 ORTHO05D004964 3.1e-08 62.8 119 35.3
PGR031G0411 Punica granatum HOM05D004244 ORTHO05D004964 6.9e-08 61.6 136 32.4
THA.LOC104826102 Tarenaya hassleriana HOM05D004244 ORTHO05D004964 6.9e-08 61.6 54 53.7
EL10Ac4g09763 Beta vulgaris HOM05D004244 ORTHO05D004964 9.0e-08 61.2 62 43.5
Os01g0680600 Oryza sativa ssp. japonica HOM05D004244 ORTHO05D004964 9.0e-08 61.2 78 44.9
Cpa.g.sc756.3 Carica papaya HOM05D004244 ORTHO05D004964 1.5e-07 60.5 59 44.1
Rhsim02G0048800 Rhododendron simsii HOM05D004244 ORTHO05D004964 1.5e-07 60.5 162 34.0
Cc09_g03010 Coffea canephora HOM05D004244 ORTHO05D004964 2.6e-07 59.7 100 41.0
Duzib106G0844 Durio zibethinus HOM05D004244 ORTHO05D004964 2.6e-07 59.7 93 35.5
Sopen04g021060 Solanum pennellii HOM05D004244 ORTHO05D004964 2.6e-07 59.7 88 37.5
SalBow1G6706 Salvia bowleyana HOM05D004244 ORTHO05D004964 3.4e-07 59.3 75 41.3
Ciclev10021373m.g Citrus clementina HOM05D004244 ORTHO05D004964 4.5e-07 58.9 50 52.0
Sabra19G0033400 Salix brachista HOM05D004244 ORTHO05D004964 4.5e-07 58.9 86 36.0
Potri.019G023400 Populus trichocarpa HOM05D004244 ORTHO05D004964 5.9e-07 58.5 61 44.3
Gohir.A11G244500 Gossypium hirsutum HOM05D004244 ORTHO05D004964 5.0e-06 55.5 55 49.1
Hund07175 Selenicereus undatus HOM05D004244 ORTHO05D004964 5.0e-06 55.5 117 26.5
Ah.06g187950 Amaranthus hybridus HOM05D004244 ORTHO05D004964 6.5e-06 55.1 56 39.3


User provided reference genes

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