Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib264G1189 Durio zibethinus HOM05D005929 ORTHO05D007869 0.0e+00 1123.2 584 100.0
Duzib147G0952 Durio zibethinus HOM05D005929 ORTHO05D007869 3.9e-265 917.9 692 73.4
Gorai.007G211400 Gossypium raimondii HOM05D005929 ORTHO05D007869 2.4e-259 898.7 696 72.0
Thecc.01G053700 Theobroma cacao HOM05D005929 ORTHO05D007869 1.4e-254 882.9 692 71.2
COL.COLO4_11392 Corchorus olitorius HOM05D005929 ORTHO05D007869 1.7e-249 865.9 696 69.8
Gorai.003G022900 Gossypium raimondii HOM05D005929 ORTHO05D007869 6.9e-246 854.0 689 69.4
Gohir.A02G159200 Gossypium hirsutum HOM05D005929 ORTHO05D007869 1.3e-244 849.7 689 69.2
Gohir.D03G021300 Gossypium hirsutum HOM05D005929 ORTHO05D007869 1.9e-243 845.9 689 68.8
Gohir.A11G190800 Gossypium hirsutum HOM05D005929 ORTHO05D007869 2.1e-239 832.4 696 68.0
Gohir.D11G197600 Gossypium hirsutum HOM05D005929 ORTHO05D007869 9.9e-237 823.5 696 67.5
Ciclev10025029m.g Citrus clementina HOM05D005929 ORTHO05D007869 1.3e-204 716.8 712 57.2
GSVIVG01022148001 Vitis vinifera HOM05D005929 ORTHO05D007869 2.3e-201 706.1 714 57.7
Manes.12G099700 Manihot esculenta HOM05D005929 ORTHO05D007869 1.1e-200 703.7 716 56.4
MD00G1045200 Malus domestica HOM05D005929 ORTHO05D007869 2.4e-198 696.0 725 56.0
Cfa004003 Carpinus fangiana HOM05D005929 ORTHO05D007869 7.0e-198 694.5 726 56.6
MD02G1169700 Malus domestica HOM05D005929 ORTHO05D007869 2.6e-197 692.6 721 55.5
Prupe.7G135500 Prunus persica HOM05D005929 ORTHO05D007869 3.5e-197 692.2 722 56.0
CsaV3_6G043190 Cucumis sativus L. HOM05D005929 ORTHO05D007869 2.9e-196 689.1 706 57.8
ClCG01G016760 Citrullus lanatus HOM05D005929 ORTHO05D007869 6.5e-196 688.0 714 57.3
CSS0000081 Camellia sinensis var. sinensis HOM05D005929 ORTHO05D007869 1.9e-195 686.4 719 56.2
Potri.005G137100 Populus trichocarpa HOM05D005929 ORTHO05D007869 7.2e-195 684.5 717 56.1
Actinidia16503 Actinidia chinensis HOM05D005929 ORTHO05D007869 2.7e-194 682.6 716 56.6
Glyma.17G175900 Glycine max HOM05D005929 ORTHO05D007869 6.1e-194 681.4 709 55.7
Dinv39868 Davidia involucrata HOM05D005929 ORTHO05D007869 5.2e-193 678.3 709 56.8
TPR.G19031 Trifolium pratense HOM05D005929 ORTHO05D007869 5.2e-193 678.3 709 56.3
MELO3C007555.2 Cucumis melo HOM05D005929 ORTHO05D007869 1.5e-192 676.8 712 57.0
Sabra05G0109600 Salix brachista HOM05D005929 ORTHO05D007869 1.5e-192 676.8 717 55.9
Psat4g087280 Pisum sativum HOM05D005929 ORTHO05D007869 2.2e-191 672.9 709 55.7
Phvul.003G244900 Phaseolus vulgaris HOM05D005929 ORTHO05D007869 2.8e-191 672.5 709 55.7
VMungo0251G2155 Vigna mungo HOM05D005929 ORTHO05D007869 3.7e-191 672.2 710 55.6
Lj4g0006502 Lotus japonicus HOM05D005929 ORTHO05D007869 4.8e-191 671.8 704 56.0
Glyma.05G084300 Glycine max HOM05D005929 ORTHO05D007869 1.1e-190 670.6 709 55.6
Lalb_Chr05g0226621 Lupinus albus HOM05D005929 ORTHO05D007869 1.1e-190 670.6 709 55.4
RcHm_v2.0_Chr2g0105071 Rosa chinensis HOM05D005929 ORTHO05D007869 2.4e-190 669.5 719 55.6
Ca_21176_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 1.9e-187 659.8 709 55.4
CANSAT56G1082 Cannabis sativa HOM05D005929 ORTHO05D007869 1.2e-186 657.1 726 53.9
FAN28G0152 Fragaria x ananassa HOM05D005929 ORTHO05D007869 1.2e-186 657.1 713 55.5
FAN23G0057 Fragaria x ananassa HOM05D005929 ORTHO05D007869 1.6e-186 656.8 713 55.5
Sed0025648 Sechium edule HOM05D005929 ORTHO05D007869 8.0e-186 654.4 715 55.4
TAR628G1297 Trochodendron aralioides HOM05D005929 ORTHO05D007869 1.0e-185 654.1 717 53.1
CiPaw.01G019600 Carya illinoinensis HOM05D005929 ORTHO05D007869 5.2e-185 651.7 714 54.6
FAN26G1042 Fragaria x ananassa HOM05D005929 ORTHO05D007869 1.2e-184 650.6 713 55.0
Nn1g05837 Nelumbo nucifera HOM05D005929 ORTHO05D007869 3.4e-184 649.0 718 53.6
FvH4_1g15790 Fragaria vesca HOM05D005929 ORTHO05D007869 5.7e-184 648.3 713 55.4
FAN19G1416 Fragaria x ananassa HOM05D005929 ORTHO05D007869 5.7e-184 648.3 713 55.4
TWI09G0459 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 3.7e-183 645.6 715 55.4
PGR102G2065 Punica granatum HOM05D005929 ORTHO05D007869 8.3e-183 644.4 717 54.0
CiPaw.02G008900 Carya illinoinensis HOM05D005929 ORTHO05D007869 1.8e-182 643.3 714 53.9
TWI53G1997 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 4.1e-182 642.1 712 54.1
MBI06_g04503_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D007869 1.9e-179 633.3 730 52.7
arahy.Tifrunner.gnm1.ann1.UKY0C7 Arachis hypogaea HOM05D005929 ORTHO05D007869 5.7e-176 621.7 792 49.1
Cc07_g05890 Coffea canephora HOM05D005929 ORTHO05D007869 6.3e-175 618.2 701 52.9
Sc03g0001480 Simmondsia chinensis HOM05D005929 ORTHO05D007869 3.3e-171 605.9 702 52.3
Lj4A143G78 Lonicera japonica HOM05D005929 ORTHO05D007869 1.6e-170 603.6 696 54.2
Cpa.g.sc55.172 Carica papaya HOM05D005929 ORTHO05D007869 1.0e-169 600.9 473 70.0
Atru.chr3.351 Acer truncatum HOM05D005929 ORTHO05D007869 3.7e-167 592.4 635 53.7
Migut.H00446 Erythranthe guttata HOM05D005929 ORTHO05D007869 7.0e-166 588.2 706 52.1
EL10Ac6g15157 Beta vulgaris HOM05D005929 ORTHO05D007869 4.5e-165 585.5 724 49.9
THA.LOC104821272 Tarenaya hassleriana HOM05D005929 ORTHO05D007869 1.3e-164 583.9 713 50.5
MSTRG.23760 Avicennia marina HOM05D005929 ORTHO05D007869 1.7e-164 583.6 701 52.5
Eucgr.H02007 Eucalyptus grandis HOM05D005929 ORTHO05D007869 3.9e-164 582.4 730 49.6
QL06p041881 Quercus lobata HOM05D005929 ORTHO05D007869 3.9e-164 582.4 481 66.5
PSO170G4100 Papaver somniferum HOM05D005929 ORTHO05D007869 6.6e-164 581.6 712 50.3
PSO210G3061 Papaver somniferum HOM05D005929 ORTHO05D007869 1.2e-162 577.4 712 50.0
Solyc02g090650.4 Solanum lycopersicum HOM05D005929 ORTHO05D007869 4.0e-161 572.4 715 51.6
DCAR_010904 Daucus carota HOM05D005929 ORTHO05D007869 8.9e-161 571.2 719 49.2
Hund13561 Selenicereus undatus HOM05D005929 ORTHO05D007869 8.9e-161 571.2 722 49.3
SGA_v2.0_scaffold15G07274 Striga asiatica HOM05D005929 ORTHO05D007869 1.5e-160 570.5 709 50.6
Sp2g29870 Schrenkiella parvula HOM05D005929 ORTHO05D007869 2.2e-159 566.6 709 49.1
Peaxi162Scf00964g00160 Petunia axillaris HOM05D005929 ORTHO05D007869 3.7e-159 565.8 719 49.8
PGSC0003DMG400015776 Solanum tuberosum HOM05D005929 ORTHO05D007869 4.9e-159 565.5 716 51.0
Nitab4.5_0010605g0010 Nicotiana tabacum HOM05D005929 ORTHO05D007869 7.0e-158 561.6 723 49.9
Rhsim08G0101600 Rhododendron simsii HOM05D005929 ORTHO05D007869 9.2e-158 561.2 938 41.4
Nitab4.5_0000310g0090 Nicotiana tabacum HOM05D005929 ORTHO05D007869 1.2e-157 560.8 708 50.7
Sopen02g035300 Solanum pennellii HOM05D005929 ORTHO05D007869 1.6e-157 560.5 715 50.9
Oeu039068.2 Olea europaea HOM05D005929 ORTHO05D007869 6.0e-157 558.5 726 49.6
Aa31LG1G15360 Aethionema arabicum HOM05D005929 ORTHO05D007869 7.3e-155 551.6 757 45.2
Thhalv10003742m.g Eutrema salsugineum HOM05D005929 ORTHO05D007869 1.2e-154 550.8 713 47.8
Ca_22183_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 5.2e-153 545.4 486 63.6
CAN.G836.71 Capsicum annuum HOM05D005929 ORTHO05D007869 4.4e-152 542.3 711 49.6
Lsat_1_v5_gn_4_168021 Lactuca sativa HOM05D005929 ORTHO05D007869 5.8e-152 542.0 687 50.1
AL8G44640 Arabidopsis lyrata HOM05D005929 ORTHO05D007869 2.4e-150 536.6 716 47.3
ECA232G2456 Erigeron canadensis HOM05D005929 ORTHO05D007869 2.4e-150 536.6 693 49.2
HanXRQChr15g0490721 Helianthus annuus HOM05D005929 ORTHO05D007869 1.2e-149 534.3 698 48.1
ATR0100G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 1.1e-147 527.7 708 46.3
BraA07t29438Z Brassica rapa HOM05D005929 ORTHO05D007869 1.6e-146 523.9 709 47.2
Aqoxy5G01270 Aquilegia oxysepala HOM05D005929 ORTHO05D007869 3.6e-146 522.7 707 48.1
vmacro17944 Vaccinium macrocarpon HOM05D005929 ORTHO05D007869 1.1e-145 521.2 921 39.4
A07p17110 Brassica napus HOM05D005929 ORTHO05D007869 1.4e-145 520.8 710 47.3
C07p24970 Brassica napus HOM05D005929 ORTHO05D007869 1.8e-145 520.4 709 47.0
BcaC06g34750 Brassica carinata HOM05D005929 ORTHO05D007869 2.6e-144 516.5 709 46.7
Carub.0008s2770 Capsella rubella HOM05D005929 ORTHO05D007869 4.4e-144 515.8 711 45.7
HPP92_009382 Vanilla planifolia HOM05D005929 ORTHO05D007869 2.9e-143 513.1 701 45.8
BcaB02g09988 Brassica carinata HOM05D005929 ORTHO05D007869 5.4e-142 508.8 705 46.0
BolC7t43027H Brassica oleracea HOM05D005929 ORTHO05D007869 9.2e-142 508.1 733 45.2
Lalb_Chr09g0333751 Lupinus albus HOM05D005929 ORTHO05D007869 6.6e-140 501.9 448 62.7
unitig_899.g14965 Utricularia gibba HOM05D005929 ORTHO05D007869 3.1e-137 493.0 726 44.6
Os10g0382300 Oryza sativa ssp. japonica HOM05D005929 ORTHO05D007869 1.1e-134 484.6 707 44.0
Zm00001eb223840 Zea mays HOM05D005929 ORTHO05D007869 2.7e-133 479.9 708 42.9
AUR62001947 Chenopodium quinoa HOM05D005929 ORTHO05D007869 9.9e-128 461.5 629 47.5
AUR62003860 Chenopodium quinoa HOM05D005929 ORTHO05D007869 8.7e-124 448.4 470 54.7
Hma1.2p1_0200F.1_g086000 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 2.8e-122 443.4 556 50.0
CARHR280890 Cardamine hirsuta HOM05D005929 ORTHO05D007869 1.6e-114 417.5 474 52.1
Haze_15421 Corylus avellana HOM05D005929 ORTHO05D007869 2.5e-107 393.7 457 53.6
Ah.03g144730 Amaranthus hybridus HOM05D005929 ORTHO05D007869 4.2e-102 376.3 593 42.5
CDE10G0504 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 9.4e-94 348.6 426 50.5
AT5G66810 Arabidopsis thaliana HOM05D005929 ORTHO05D007869 9.1e-89 332.0 513 42.7
Mapoly0148s0013 Marchantia polymorpha HOM05D005929 ORTHO05D007869 4.7e-77 293.1 788 31.3
Hma1.2p1_0200F.1_g086010 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 2.6e-72 277.3 292 58.2
SMO116G0373 Selaginella moellendorffii HOM05D005929 ORTHO05D007869 1.2e-67 261.9 690 31.0
Pp3c4_14260 Physcomitrium patens HOM05D005929 ORTHO05D007869 2.8e-66 257.3 542 37.3
SEGI_10908 Sequoiadendron giganteum HOM05D005929 ORTHO05D000002 3.1e-57 227.3 338 45.3
PSO782G4943 Papaver somniferum HOM05D005929 ORTHO05D007869 1.2e-56 225.3 182 66.5
DCAR_001419 Daucus carota HOM05D005929 ORTHO05D007869 2.5e-54 217.6 275 48.0
Dinv29975 Davidia involucrata HOM05D005929 ORTHO05D007869 4.4e-51 206.8 358 43.3
QL06p041873 Quercus lobata HOM05D005929 ORTHO05D007869 2.1e-37 161.4 125 66.4
MD15G1282100 Malus domestica HOM05D005929 ORTHO05D007869 2.3e-36 157.9 97 81.4
Cpa.g.sc55.170 Carica papaya HOM05D005929 ORTHO05D007869 3.1e-36 157.5 134 63.4
MD15G1282000 Malus domestica HOM05D005929 ORTHO05D007869 1.1e-33 149.1 103 75.7
SalBow1G6022 Salvia bowleyana HOM05D005929 ORTHO05D007869 5.4e-33 146.7 185 51.9
CDE10G0678 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 3.5e-32 144.1 268 37.7
ATR0833G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 1.3e-31 142.1 127 59.8
Lalb_Chr09g0333761 Lupinus albus HOM05D005929 ORTHO05D007869 3.0e-31 141.0 126 60.3
QL06p041946 Quercus lobata HOM05D005929 ORTHO05D007869 1.1e-28 132.5 144 54.9
Lsat_1_v5_gn_2_14601 Lactuca sativa HOM05D005929 ORTHO05D029973 3.2e-25 120.9 146 55.5
RcHm_v2.0_Chr7g0235891 Rosa chinensis HOM05D005929 ORTHO05D007869 3.0e-23 114.4 68 79.4
Cre01.g029050 Chlamydomonas reinhardtii HOM05D003178 ORTHO05D003636 8.7e-07 59.7 168 28.0
unitig_736.g22376 Utricularia gibba HOM05D005929 ORTHO05D425945 1.9e-06 58.5 76 50.0
Lsat_1_v5_gn_2_40080 Lactuca sativa HOM05D005929 ORTHO05D029973 4.3e-06 57.4 104 42.3


User provided reference genes

Program Settings