Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib264G1010 Durio zibethinus HOM05D005644 ORTHO05D007092 7.6e-109 397.1 193 100.0
Gohir.A02G166400 Gossypium hirsutum HOM05D005644 ORTHO05D007092 2.5e-104 382.1 193 95.3
Gohir.D03G013600 Gossypium hirsutum HOM05D005644 ORTHO05D007092 4.3e-104 381.3 193 95.3
Gorai.003G013900 Gossypium raimondii HOM05D005644 ORTHO05D007092 4.3e-104 381.3 193 95.3
Thecc.01G033400 Theobroma cacao HOM05D005644 ORTHO05D007092 2.1e-103 379.0 193 95.3
TWI73G0320 Tripterygium wilfordii HOM05D005644 ORTHO05D007092 3.1e-102 375.2 193 92.7
Manes.02G095200 Manihot esculenta HOM05D005644 ORTHO05D007092 3.4e-101 371.7 193 92.7
Potri.005G121700 Populus trichocarpa HOM05D005644 ORTHO05D007092 3.4e-101 371.7 193 91.7
Ciclev10022394m.g Citrus clementina HOM05D005644 ORTHO05D007092 1.9e-99 365.9 193 89.6
Nn1g04949 Nelumbo nucifera HOM05D005644 ORTHO05D007092 1.9e-99 365.9 193 91.2
Manes.01G136400 Manihot esculenta HOM05D005644 ORTHO05D007092 2.4e-99 365.5 193 91.2
CiPaw.02G018800 Carya illinoinensis HOM05D005644 ORTHO05D007092 3.2e-99 365.2 193 90.7
Dinv39995 Davidia involucrata HOM05D005644 ORTHO05D007092 3.2e-99 365.2 190 92.6
QL06p046522 Quercus lobata HOM05D005644 ORTHO05D007092 3.2e-99 365.2 192 91.1
Potri.007G023500 Populus trichocarpa HOM05D005644 ORTHO05D007092 5.4e-99 364.4 193 90.7
Prupe.7G156300 Prunus persica HOM05D005644 ORTHO05D007092 5.4e-99 364.4 193 90.7
Atru.chr7.2312 Acer truncatum HOM05D005644 ORTHO05D007092 7.1e-99 364.0 191 90.6
MELO3C026580.2 Cucumis melo HOM05D005644 ORTHO05D007092 9.3e-99 363.6 193 89.6
Lalb_Chr09g0333481 Lupinus albus HOM05D005644 ORTHO05D007092 1.2e-98 363.2 193 90.2
GSVIVG01018941001 Vitis vinifera HOM05D005644 ORTHO05D007092 2.1e-98 362.5 193 89.6
CsaV3_3G042790 Cucumis sativus L. HOM05D005644 ORTHO05D007092 4.6e-98 361.3 193 89.1
Lj2A454T58 Lonicera japonica HOM05D005644 ORTHO05D007092 4.6e-98 361.3 193 90.7
Medtr8g077200 Medicago truncatula HOM05D005644 ORTHO05D007092 4.6e-98 361.3 193 90.7
Phvul.003G254800 Phaseolus vulgaris HOM05D005644 ORTHO05D007092 4.6e-98 361.3 193 90.2
MD02G1145400 Malus domestica HOM05D005644 ORTHO05D007092 6.0e-98 360.9 193 89.1
Psat4g094240 Pisum sativum HOM05D005644 ORTHO05D007092 6.0e-98 360.9 193 90.7
Glyma.16G138200 Glycine max HOM05D005644 ORTHO05D007092 7.9e-98 360.5 193 89.6
TAR101G0001 Trochodendron aralioides HOM05D005644 ORTHO05D007092 7.9e-98 360.5 193 89.6
vmacro17823 Vaccinium macrocarpon HOM05D005644 ORTHO05D007092 7.9e-98 360.5 194 90.2
arahy.Tifrunner.gnm1.ann1.59MT2Q Arachis hypogaea HOM05D005644 ORTHO05D007092 1.3e-97 359.8 193 88.6
AL3G51550 Arabidopsis lyrata HOM05D005644 ORTHO05D007092 3.0e-97 358.6 193 88.1
AT2G18290 Arabidopsis thaliana HOM05D005644 ORTHO05D007092 3.0e-97 358.6 193 88.1
Ca_22319_v3 Cicer arietinum L. HOM05D005644 ORTHO05D007092 3.9e-97 358.2 193 89.6
Sed0008907 Sechium edule HOM05D005644 ORTHO05D007092 5.1e-97 357.8 193 88.1
Cc07_g09670 Coffea canephora HOM05D005644 ORTHO05D007092 6.7e-97 357.5 190 89.5
PSO675G1163 Papaver somniferum HOM05D005644 ORTHO05D007092 1.9e-96 355.9 193 86.0
Eucgr.I02428 Eucalyptus grandis HOM05D005644 ORTHO05D007092 3.3e-96 355.1 193 88.6
Aa31LG8G15730 Aethionema arabicum HOM05D005644 ORTHO05D007092 5.6e-96 354.4 193 87.6
PSO541G0643 Papaver somniferum HOM05D005644 ORTHO05D007092 5.6e-96 354.4 193 86.0
arahy.Tifrunner.gnm1.ann1.SR5TCU Arachis hypogaea HOM05D005644 ORTHO05D007092 7.4e-96 354.0 190 88.4
Sp3g31700 Schrenkiella parvula HOM05D005644 ORTHO05D007092 7.4e-96 354.0 193 87.0
MSTRG.3592 Avicennia marina HOM05D005644 ORTHO05D007092 9.6e-96 353.6 190 88.9
Oeu050374.1 Olea europaea HOM05D005644 ORTHO05D007092 9.6e-96 353.6 190 88.9
SalBow5G1882 Salvia bowleyana HOM05D005644 ORTHO05D007092 9.6e-96 353.6 190 88.4
CANSAT01G2444 Cannabis sativa HOM05D005644 ORTHO05D007092 2.8e-95 352.1 193 86.5
Carub.0003s3246 Capsella rubella HOM05D005644 ORTHO05D007092 3.7e-95 351.7 193 86.5
THA.LOC104819776 Tarenaya hassleriana HOM05D005644 ORTHO05D007092 3.7e-95 351.7 193 87.6
Thhalv10022866m.g Eutrema salsugineum HOM05D005644 ORTHO05D007092 1.1e-94 350.1 193 86.5
A06p33310 Brassica napus HOM05D005644 ORTHO05D007092 1.8e-94 349.4 193 85.5
C03p59070 Brassica napus HOM05D005644 ORTHO05D007092 1.8e-94 349.4 193 85.5
BolC3t18168H Brassica oleracea HOM05D005644 ORTHO05D007092 1.8e-94 349.4 193 85.5
Lj4g0022669 Lotus japonicus HOM05D005644 ORTHO05D007092 1.8e-94 349.4 194 87.6
Hund21503 Selenicereus undatus HOM05D005644 ORTHO05D007092 4.0e-94 348.2 193 85.0
ClCG10G013900 Citrullus lanatus HOM05D005644 ORTHO05D007092 6.9e-94 347.4 219 78.1
Migut.L00368 Erythranthe guttata HOM05D005644 ORTHO05D007092 9.0e-94 347.1 190 86.3
Migut.L00376 Erythranthe guttata HOM05D005644 ORTHO05D007092 9.0e-94 347.1 190 86.3
EL10Ac4g07935 Beta vulgaris HOM05D005644 ORTHO05D007092 1.2e-93 346.7 193 85.0
BcaB08g34803 Brassica carinata HOM05D005644 ORTHO05D007092 1.2e-93 346.7 193 84.5
Solyc02g062680.3 Solanum lycopersicum HOM05D005644 ORTHO05D007092 2.0e-93 345.9 190 87.4
Sopen02g013700 Solanum pennellii HOM05D005644 ORTHO05D007092 2.0e-93 345.9 190 87.4
RcHm_v2.0_Chr2g0101251 Rosa chinensis HOM05D005644 ORTHO05D007092 3.4e-93 345.1 193 85.5
PGSC0003DMG400015483 Solanum tuberosum HOM05D005644 ORTHO05D007092 3.4e-93 345.1 190 87.4
PGR031G1764 Punica granatum HOM05D005644 ORTHO05D007092 1.3e-92 343.2 197 84.8
Glyma.02G055400 Glycine max HOM05D005644 ORTHO05D007092 1.7e-92 342.8 193 86.5
Aqoxy6G01133 Aquilegia oxysepala HOM05D005644 ORTHO05D007092 2.2e-92 342.4 193 84.5
TPR.G24098 Trifolium pratense HOM05D005644 ORTHO05D007092 2.2e-92 342.4 232 75.4
Oeu002799.2 Olea europaea HOM05D005644 ORTHO05D007092 2.9e-92 342.0 190 86.3
THA.LOC104804235 Tarenaya hassleriana HOM05D005644 ORTHO05D007092 2.9e-92 342.0 193 86.0
SGA_v2.0_scaffold44G16541 Striga asiatica HOM05D005644 ORTHO05D007092 4.9e-92 341.3 190 85.8
HanXRQChr09g0261331 Helianthus annuus HOM05D005644 ORTHO05D007092 8.4e-92 340.5 193 84.5
CAN.G53.17 Capsicum annuum HOM05D005644 ORTHO05D007092 1.1e-91 340.1 185 87.0
Sc16g0002690 Simmondsia chinensis HOM05D005644 ORTHO05D007092 1.1e-91 340.1 193 83.4
ECA232G0363 Erigeron canadensis HOM05D005644 ORTHO05D007092 1.9e-91 339.3 193 82.9
FvH4_1g13080 Fragaria vesca HOM05D005644 ORTHO05D007092 4.2e-91 338.2 190 85.8
unitig_37.g12363 Utricularia gibba HOM05D005644 ORTHO05D007092 5.5e-91 337.8 190 84.7
MBI02_g12270_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 1.6e-90 336.3 210 77.6
Lsat_1_v5_gn_4_151201 Lactuca sativa HOM05D005644 ORTHO05D007092 1.0e-89 333.6 182 87.4
AUR62020530 Chenopodium quinoa HOM05D005644 ORTHO05D007092 2.3e-89 332.4 193 82.4
AUR62043224 Chenopodium quinoa HOM05D005644 ORTHO05D007092 2.3e-89 332.4 193 82.4
Rhsim11G0151400 Rhododendron simsii HOM05D005644 ORTHO05D007092 5.1e-89 331.3 247 70.0
PGR083G1765 Punica granatum HOM05D005644 ORTHO05D007092 1.5e-88 329.7 193 81.9
FvH4_5g29620 Fragaria vesca HOM05D005644 ORTHO05D007092 2.5e-88 328.9 190 83.7
ATR0594G186 Amborella trichopoda HOM05D005644 ORTHO05D007092 2.1e-87 325.9 193 80.8
Zm00001eb342630 Zea mays HOM05D005644 ORTHO05D007092 4.8e-87 324.7 177 84.7
BraA06t26260Z Brassica rapa HOM05D005644 ORTHO05D007092 2.4e-86 322.4 199 79.4
Os05g0579800 Oryza sativa ssp. japonica HOM05D005644 ORTHO05D007092 1.2e-85 320.1 177 83.1
CSS0024834 Camellia sinensis var. sinensis HOM05D005644 ORTHO05D007092 2.2e-84 315.8 164 92.1
AUR62034193 Chenopodium quinoa HOM05D005644 ORTHO05D007092 8.4e-84 313.9 193 78.2
VMungo0251G3244 Vigna mungo HOM05D005644 ORTHO05D007092 1.1e-83 313.5 170 88.8
Zm00001eb294590 Zea mays HOM05D005644 ORTHO05D007092 1.2e-82 310.1 177 80.8
CDE04G3399 Ceratophyllum demersum HOM05D005644 ORTHO05D007092 2.1e-82 309.3 164 86.0
Nitab4.5_0000136g0330 Nicotiana tabacum HOM05D005644 ORTHO05D007092 1.8e-81 306.2 172 85.5
Peaxi162Scf00008g03525 Petunia axillaris HOM05D005644 ORTHO05D007092 1.8e-81 306.2 190 80.5
Nitab4.5_0005482g0020 Nicotiana tabacum HOM05D005644 ORTHO05D007092 1.5e-80 303.1 174 85.1
Atru.chr3.600 Acer truncatum HOM05D005644 ORTHO05D007092 1.6e-79 299.7 194 75.3
Sabra05G0100200 Salix brachista HOM05D005644 ORTHO05D007092 1.6e-79 299.7 159 89.9
FAN19G1519 Fragaria x ananassa HOM05D005644 ORTHO05D007092 2.6e-77 292.4 167 85.0
BolC7t40857H Brassica oleracea HOM05D005644 ORTHO05D007092 6.1e-74 281.2 195 71.8
FAN28G2376 Fragaria x ananassa HOM05D005644 ORTHO05D003509 1.1e-70 270.4 159 83.6
FAN23G1669 Fragaria x ananassa HOM05D005644 ORTHO05D007092 1.5e-69 266.5 158 84.2
Hma1.2p1_0789F.1_g218290 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 2.0e-69 266.2 134 94.8
Cpa.g.sc6.131 Carica papaya HOM05D005644 ORTHO05D007092 1.4e-67 260.0 139 89.9
FAN08G2945 Fragaria x ananassa HOM05D005644 ORTHO05D007092 1.9e-67 259.6 156 82.1
MBI08_g40822_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 1.0e-65 253.8 227 60.8
HPP92_023420 Vanilla planifolia HOM05D005644 ORTHO05D007092 1.8e-65 253.1 194 66.5
Mapoly0106s0034 Marchantia polymorpha HOM05D005644 ORTHO05D007092 3.1e-62 242.3 170 66.5
BcaC06g36396 Brassica carinata HOM05D005644 ORTHO05D007092 5.3e-62 241.5 164 71.3
Pp3c7_6320 Physcomitrium patens HOM05D005644 ORTHO05D007092 2.1e-58 229.6 190 58.4
FAN26G0781 Fragaria x ananassa HOM05D000577 ORTHO05D003509 6.7e-57 224.6 133 83.5
SMO137G0236 Selaginella moellendorffii HOM05D005644 ORTHO05D007092 8.8e-57 224.2 170 61.8
AagrBONN_evm.TU.Sc2ySwM_362.2207 Anthoceros agrestis HOM05D005644 ORTHO05D007092 4.4e-56 221.9 173 60.1
SGA_v2.0_scaffold2G01321 Striga asiatica HOM05D005644 ORTHO05D007092 2.8e-55 219.2 190 61.6
CARHR108880 Cardamine hirsuta HOM05D005644 ORTHO05D007092 7.0e-54 214.5 112 88.4
FAN18G2110 Fragaria x ananassa HOM05D005644 ORTHO05D007092 2.9e-52 209.1 166 65.7
MCO15G254 Micromonas commoda HOM05D005644 ORTHO05D007092 2.9e-52 209.1 178 56.7
PRCOL_00001837 Prasinoderma coloniale HOM05D005644 ORTHO05D007092 5.7e-48 194.9 166 57.8
SEGI_22782 Sequoiadendron giganteum HOM05D005644 ORTHO05D007092 4.2e-43 178.7 110 75.5
Haze_27504 Corylus avellana HOM05D005644 ORTHO05D007092 1.6e-42 176.8 142 56.3
Cre13.g571850 Chlamydomonas reinhardtii HOM05D005644 ORTHO05D007092 9.1e-38 161.0 144 49.3
CBR_g49399 Chara braunii HOM05D005644 ORTHO05D007092 2.7e-37 159.5 112 63.4
DCAR_025950 Daucus carota HOM05D005644 ORTHO05D007092 2.8e-31 139.4 135 54.8
Hma1.2p1_2451F.1_g322360 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 2.0e-29 133.3 135 54.1
FAN13G0528 Fragaria x ananassa HOM05D005644 ORTHO05D007092 4.6e-29 132.1 167 47.3
MBI02_g42708_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 5.6e-27 125.2 134 56.0
MBI02_g23461_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 1.4e-25 120.6 219 39.7
C07p04570 Brassica napus HOM05D005644 ORTHO05D007092 4.4e-24 115.5 126 49.2
MBI18_g01974_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 3.2e-22 109.4 70 74.3
MBI18_g16980_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 4.1e-22 109.0 123 49.6
MBI02_g17151_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 1.3e-20 104.0 134 47.0
COL.COLO4_22055 Corchorus olitorius HOM05D005644 ORTHO05D007092 3.1e-17 92.8 50 90.0
Hund21501 Selenicereus undatus HOM05D005644 ORTHO05D007092 3.1e-17 92.8 53 84.9
Hma1.2p1_0450F.1_g155660 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 1.2e-16 90.9 57 73.7
Ah.13g077660 Amaranthus hybridus HOM05D005644 ORTHO05D007092 6.0e-13 78.6 55 63.6
Thecc.08G151500 Theobroma cacao HOM05D005644 ORTHO05D007092 1.1e-09 67.8 33 84.8
Dinv38404 Davidia involucrata HOM05D005644 ORTHO05D007092 8.9e-09 64.7 37 75.7
MBI16_g04464_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 9.9e-08 61.2 104 37.5
Thecc.01G208400 Theobroma cacao HOM05D005644 ORTHO05D408548 4.1e-06 55.8 34 79.4


User provided reference genes

Program Settings