Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib264G0817 Durio zibethinus HOM05D003192 ORTHO05D014480 1.2e-37 159.5 86 100.0
Duzib147G1583 Durio zibethinus HOM05D003192 ORTHO05D003596 4.2e-27 124.4 81 81.5
Thecc.01G090500 Theobroma cacao HOM05D003192 ORTHO05D003596 2.3e-25 118.6 81 79.0
Gohir.D03G036033 Gossypium hirsutum HOM05D003192 ORTHO05D003596 1.1e-22 109.8 80 72.5
Gohir.A02G144501 Gossypium hirsutum HOM05D003192 ORTHO05D003596 1.4e-22 109.4 80 73.8
Gorai.003G037800 Gossypium raimondii HOM05D003192 ORTHO05D003596 1.2e-21 106.3 80 70.0
Gohir.A11G050500 Gossypium hirsutum HOM05D003192 ORTHO05D003596 3.5e-21 104.8 81 71.6
Gorai.007G058900 Gossypium raimondii HOM05D003192 ORTHO05D003596 3.5e-21 104.8 81 71.6
Gohir.D11G053800 Gossypium hirsutum HOM05D003192 ORTHO05D003596 7.7e-21 103.6 81 71.6
Gohir.A11G207000 Gossypium hirsutum HOM05D003192 ORTHO05D003596 1.1e-19 99.8 80 68.8
Gohir.D11G216300 Gossypium hirsutum HOM05D003192 ORTHO05D003596 3.2e-19 98.2 78 69.2
Gorai.007G232500 Gossypium raimondii HOM05D003192 ORTHO05D003596 4.2e-19 97.8 78 69.2
Atru.chr3.1246 Acer truncatum HOM05D003192 ORTHO05D003596 2.0e-16 89.0 78 61.5
Duzib187G1957 Durio zibethinus HOM05D003192 ORTHO05D003596 1.1e-14 83.2 79 60.8
Ciclev10024755m.g Citrus clementina HOM05D003192 ORTHO05D003596 4.1e-14 81.3 78 60.3
Haze_03871 Corylus avellana HOM05D003192 ORTHO05D003596 3.5e-13 78.2 79 57.0
FAN26G1555 Fragaria x ananassa HOM05D003192 ORTHO05D003596 3.5e-13 78.2 78 57.7
Cfa006881 Carpinus fangiana HOM05D003192 ORTHO05D003596 5.9e-13 77.4 79 57.0
FvH4_1g19631 Fragaria vesca HOM05D003192 ORTHO05D003596 1.0e-12 76.6 78 56.4
FAN19G3065 Fragaria x ananassa HOM05D003192 ORTHO05D003596 1.0e-12 76.6 78 56.4
Sp7g35710 Schrenkiella parvula HOM05D003192 ORTHO05D003596 1.0e-12 76.6 78 56.4
CiPaw.08G140100 Carya illinoinensis HOM05D003192 ORTHO05D003596 1.7e-12 75.9 79 55.7
BcaB03g12309 Brassica carinata HOM05D003192 ORTHO05D003596 5.0e-12 74.3 78 53.8
A08p23070 Brassica napus HOM05D003192 ORTHO05D003596 5.0e-12 74.3 78 53.8
BraA08t34266Z Brassica rapa HOM05D003192 ORTHO05D003596 5.0e-12 74.3 78 53.8
Thhalv10027141m.g Eutrema salsugineum HOM05D003192 ORTHO05D003596 5.0e-12 74.3 78 53.8
FAN23G2642 Fragaria x ananassa HOM05D003192 ORTHO05D003596 5.0e-12 74.3 78 55.1
RcHm_v2.0_Chr2g0111201 Rosa chinensis HOM05D003192 ORTHO05D003596 4.2e-11 71.2 78 52.6
Dinv13601 Davidia involucrata HOM05D003192 ORTHO05D003596 5.5e-11 70.9 78 55.1
CSS0015283 Camellia sinensis var. sinensis HOM05D003192 ORTHO05D003596 7.2e-11 70.5 79 50.6
THA.LOC104807671 Tarenaya hassleriana HOM05D003192 ORTHO05D003596 9.5e-11 70.1 53 69.8
CANSAT01G3047 Cannabis sativa HOM05D003192 ORTHO05D003596 1.2e-10 69.7 81 50.6
Actinidia06514 Actinidia chinensis HOM05D003192 ORTHO05D003596 2.8e-10 68.6 68 57.4
FAN28G2653 Fragaria x ananassa HOM05D003192 ORTHO05D003596 3.6e-10 68.2 75 54.7
Aa31LG6G15020 Aethionema arabicum HOM05D003192 ORTHO05D003596 4.7e-10 67.8 78 50.0
Manes.13G100000 Manihot esculenta HOM05D003192 ORTHO05D003596 6.1e-10 67.4 79 50.6
Prupe.6G201700 Prunus persica HOM05D003192 ORTHO05D003596 6.1e-10 67.4 78 51.3
Potri.001G415800 Populus trichocarpa HOM05D003192 ORTHO05D003596 8.0e-10 67.0 79 49.4
A05p10970 Brassica napus HOM05D000295 ORTHO05D014480 1.4e-09 66.2 53 66.0
C03p33030 Brassica napus HOM05D003192 ORTHO05D014480 1.4e-09 66.2 53 66.0
BraA05t20043Z Brassica rapa HOM05D000295 ORTHO05D014480 1.4e-09 66.2 53 66.0
Rhsim10G0172900 Rhododendron simsii HOM05D003192 ORTHO05D003596 2.3e-09 65.5 60 60.0
QL11p025213 Quercus lobata HOM05D003192 ORTHO05D003596 3.0e-09 65.1 79 46.8
Cfa005735 Carpinus fangiana HOM05D003192 ORTHO05D003596 4.0e-09 64.7 79 49.4
Sed0023170 Sechium edule HOM05D003192 ORTHO05D003596 4.0e-09 64.7 78 48.7
TWI77G0115 Tripterygium wilfordii HOM05D003192 ORTHO05D003596 4.0e-09 64.7 79 50.6
Dinv24148 Davidia involucrata HOM05D003192 ORTHO05D003596 5.2e-09 64.3 79 46.8
Sabra16G0282500 Salix brachista HOM05D003192 ORTHO05D003596 5.2e-09 64.3 79 49.4
Solyc11g010620.3 Solanum lycopersicum HOM05D003192 ORTHO05D003596 6.8e-09 63.9 78 44.9
Actinidia25308 Actinidia chinensis HOM05D003192 ORTHO05D003596 8.9e-09 63.5 78 48.7
A04p24330 Brassica napus HOM05D002855 ORTHO05D032761 8.9e-09 63.5 65 55.4
AT4G38062 Arabidopsis thaliana HOM05D003192 ORTHO05D003596 1.5e-08 62.8 78 47.4
BcaB03g12313 Brassica carinata HOM05D003192 ORTHO05D014480 1.5e-08 62.8 78 51.3
BcaC01g00350 Brassica carinata HOM05D003192 ORTHO05D003596 1.5e-08 62.8 78 51.3
BolC3t20120H Brassica oleracea HOM05D003192 ORTHO05D003596 1.5e-08 62.8 78 51.3
Carub.0007s0215 Capsella rubella HOM05D003192 ORTHO05D003596 1.5e-08 62.8 78 46.2
Sopen11g005420 Solanum pennellii HOM05D003192 ORTHO05D003596 1.5e-08 62.8 78 43.6
AL7G12570 Arabidopsis lyrata HOM05D003192 ORTHO05D003596 3.4e-08 61.6 75 46.7
Peaxi162Scf00191g00034 Petunia axillaris HOM05D003192 ORTHO05D003596 3.4e-08 61.6 78 42.3
QL11p025224 Quercus lobata HOM05D003192 ORTHO05D003596 3.4e-08 61.6 74 47.3
C03p78760 Brassica napus HOM05D003192 ORTHO05D003596 5.7e-08 60.8 78 51.3
QL06p035789 Quercus lobata HOM05D003192 ORTHO05D003596 7.5e-08 60.5 51 60.8
Sed0023722 Sechium edule HOM05D003192 ORTHO05D003596 2.2e-07 58.9 78 44.9
Aqoxy5G01385 Aquilegia oxysepala HOM05D003192 ORTHO05D003596 3.7e-07 58.2 78 44.9
CsaV3_6G044990 Cucumis sativus L. HOM05D003192 ORTHO05D003596 3.7e-07 58.2 78 43.6
Potri.011G131500 Populus trichocarpa HOM05D003192 ORTHO05D003596 3.7e-07 58.2 74 48.6
Nitab4.5_0004153g0070 Nicotiana tabacum HOM05D003192 ORTHO05D003596 4.9e-07 57.8 69 44.9
PGR031G3296 Punica granatum HOM05D003192 ORTHO05D003596 4.9e-07 57.8 78 38.5
TAR625G0274 Trochodendron aralioides HOM05D003192 ORTHO05D003596 6.3e-07 57.4 79 41.8
Sabra11G0118600 Salix brachista HOM05D003192 ORTHO05D003596 8.3e-07 57.0 74 48.6
TWI53G1641 Tripterygium wilfordii HOM05D003192 ORTHO05D003596 8.3e-07 57.0 62 58.1
vmacro13008 Vaccinium macrocarpon HOM05D003192 ORTHO05D003596 8.3e-07 57.0 45 64.4
BcaC02g11494 Brassica carinata HOM05D002855 ORTHO05D032761 1.1e-06 56.6 65 52.3
C04p14740 Brassica napus HOM05D002855 ORTHO05D032761 1.1e-06 56.6 65 52.3
Cc07_g14090 Coffea canephora HOM05D003192 ORTHO05D003596 1.1e-06 56.6 78 42.3
Eucgr.I00559 Eucalyptus grandis HOM05D003192 ORTHO05D003596 1.1e-06 56.6 79 45.6
MD10G1054400 Malus domestica HOM05D003192 ORTHO05D003596 1.1e-06 56.6 78 43.6
QL01p016133 Quercus lobata HOM05D003192 ORTHO05D003596 1.1e-06 56.6 74 43.2
HanXRQChr11g0346961 Helianthus annuus HOM05D003192 ORTHO05D003596 1.4e-06 56.2 77 39.0
Dinv20194 Davidia involucrata HOM05D003192 ORTHO05D003596 2.4e-06 55.5 64 48.4
Dinv29065 Davidia involucrata HOM05D003192 ORTHO05D003596 2.4e-06 55.5 64 48.4
ECA238G4297 Erigeron canadensis HOM05D003192 ORTHO05D003596 2.4e-06 55.5 78 39.7
Solyc10g047540.3 Solanum lycopersicum HOM05D003192 ORTHO05D003596 2.4e-06 55.5 79 40.5
Sopen10g017840 Solanum pennellii HOM05D003192 ORTHO05D003596 2.4e-06 55.5 79 40.5
CANSAT54G2948 Cannabis sativa HOM05D003192 ORTHO05D003596 3.1e-06 55.1 64 48.4
ECA233G2454 Erigeron canadensis HOM05D000169 ORTHO05D003596 3.1e-06 55.1 75 41.3
Migut.B00551 Erythranthe guttata HOM05D003192 ORTHO05D003596 3.1e-06 55.1 79 41.8
CSS0047518 Camellia sinensis var. sinensis HOM05D003192 ORTHO05D003596 4.1e-06 54.7 79 41.8
ClCG01G018360 Citrullus lanatus HOM05D003192 ORTHO05D003596 4.1e-06 54.7 78 43.6
DCAR_014184 Daucus carota HOM05D003192 ORTHO05D003596 4.1e-06 54.7 79 38.0
Nitab4.5_0002017g0020 Nicotiana tabacum HOM05D003192 ORTHO05D003596 4.1e-06 54.7 79 41.8
MELO3C007714.2 Cucumis melo HOM05D003192 ORTHO05D003596 5.4e-06 54.3 83 43.4
MSTRG.15688 Avicennia marina HOM05D003192 ORTHO05D003596 7.0e-06 53.9 75 41.3
VMungo0251G1378 Vigna mungo HOM05D003192 ORTHO05D003596 9.2e-06 53.5 79 39.2


User provided reference genes

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