Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib264G0706 Durio zibethinus HOM05D006509 ORTHO05D008144 6.3e-185 650.6 321 100.0
Thecc.01G136400 Theobroma cacao HOM05D006509 ORTHO05D008144 2.9e-153 545.4 323 83.6
Gorai.010G244900 Gossypium raimondii HOM05D006509 ORTHO05D008144 2.1e-148 529.3 328 80.5
Gohir.D13G187200 Gossypium hirsutum HOM05D006509 ORTHO05D008144 6.2e-148 527.7 330 80.0
Gohir.A09G005300 Gossypium hirsutum HOM05D006509 ORTHO05D008144 1.4e-131 473.4 326 74.5
Gohir.D09G004600 Gossypium hirsutum HOM05D006509 ORTHO05D008144 6.9e-131 471.1 326 73.9
Gorai.006G006200 Gossypium raimondii HOM05D006509 ORTHO05D008144 9.9e-130 467.2 326 73.0
Gohir.A13G179100 Gossypium hirsutum HOM05D006509 ORTHO05D008144 8.4e-113 411.0 228 87.7
GSVIVG01010764001 Vitis vinifera HOM05D006509 ORTHO05D008144 3.0e-110 402.5 328 65.9
Manes.09G055500 Manihot esculenta HOM05D006509 ORTHO05D008144 4.3e-109 398.7 329 64.7
Ciclev10032158m.g Citrus clementina HOM05D006509 ORTHO05D008144 5.7e-109 398.3 264 73.9
Cfa008714 Carpinus fangiana HOM05D006509 ORTHO05D008144 1.3e-108 397.1 329 65.3
Atru.chr11.1320 Acer truncatum HOM05D006509 ORTHO05D008144 2.2e-105 386.3 323 62.5
Atru.chr11.1232 Acer truncatum HOM05D006509 ORTHO05D008144 2.9e-105 386.0 323 62.5
TAR629G0624 Trochodendron aralioides HOM05D006509 ORTHO05D008144 5.0e-105 385.2 333 61.6
A05p29310 Brassica napus HOM05D006509 ORTHO05D008144 7.2e-104 381.3 257 68.9
BraA05t21822Z Brassica rapa HOM05D006509 ORTHO05D008144 9.4e-104 380.9 292 63.4
C05p44930 Brassica napus HOM05D006509 ORTHO05D008144 1.2e-103 380.6 291 62.2
BolC5t33216H Brassica oleracea HOM05D006509 ORTHO05D008144 1.2e-103 380.6 291 62.2
RcHm_v2.0_Chr1g0363071 Rosa chinensis HOM05D006509 ORTHO05D008144 1.6e-103 380.2 328 60.7
Eucgr.G02566 Eucalyptus grandis HOM05D006509 ORTHO05D008144 2.7e-103 379.4 251 72.9
BcaC05g28409 Brassica carinata HOM05D006509 ORTHO05D008144 4.6e-103 378.6 331 58.3
Haze_11724 Corylus avellana HOM05D006509 ORTHO05D008144 4.6e-103 378.6 298 67.1
Thhalv10021111m.g Eutrema salsugineum HOM05D006509 ORTHO05D008144 7.9e-103 377.9 328 58.5
CANSAT56G2102 Cannabis sativa HOM05D006509 ORTHO05D008144 1.4e-102 377.1 327 62.7
QL03p043626 Quercus lobata HOM05D006509 ORTHO05D008144 1.8e-102 376.7 327 63.0
Sp3g17820 Schrenkiella parvula HOM05D006509 ORTHO05D008144 1.8e-102 376.7 335 58.5
Carub.0003s1969 Capsella rubella HOM05D006509 ORTHO05D008144 2.3e-102 376.3 295 59.7
Hma1.2p1_1005F.1_g246910 Hydrangea macrophylla HOM05D006509 ORTHO05D008144 2.3e-102 376.3 330 60.9
THA.LOC104800032 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 6.7e-102 374.8 260 69.2
CiPaw.05G167100 Carya illinoinensis HOM05D006509 ORTHO05D008144 1.1e-101 374.0 328 62.2
Nn1g04452 Nelumbo nucifera HOM05D006509 ORTHO05D008144 1.7e-100 370.2 331 58.9
Nitab4.5_0002192g0100 Nicotiana tabacum HOM05D006509 ORTHO05D008144 4.8e-100 368.6 330 61.5
CSS0015169 Camellia sinensis var. sinensis HOM05D006509 ORTHO05D008144 1.4e-99 367.1 326 57.4
BcaB06g26050 Brassica carinata HOM05D006509 ORTHO05D008144 1.8e-99 366.7 258 66.7
CARHR095320 Cardamine hirsuta HOM05D006509 ORTHO05D008144 3.1e-99 365.9 330 57.3
THA.LOC104814131 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 4.1e-99 365.5 260 67.3
AT3G19810 Arabidopsis thaliana HOM05D006509 ORTHO05D008144 5.3e-99 365.2 254 67.3
Aa31LG8G6580 Aethionema arabicum HOM05D006509 ORTHO05D008144 2.6e-98 362.8 289 60.9
FAN06G0528 Fragaria x ananassa HOM05D006509 ORTHO05D008144 2.6e-98 362.8 330 59.7
FvH4_7g19250 Fragaria vesca HOM05D006509 ORTHO05D008144 3.4e-98 362.5 330 59.4
MD01G1107600 Malus domestica HOM05D006509 ORTHO05D008144 7.7e-98 361.3 324 59.0
AL3G33260 Arabidopsis lyrata HOM05D006509 ORTHO05D008144 2.2e-97 359.8 327 57.8
CAN.G157.10 Capsicum annuum HOM05D006509 ORTHO05D008144 6.5e-97 358.2 305 61.3
Peaxi162Scf00818g00020 Petunia axillaris HOM05D006509 ORTHO05D008144 6.5e-97 358.2 255 68.2
FAN01G2825 Fragaria x ananassa HOM05D006509 ORTHO05D008144 1.4e-96 357.1 330 58.8
Lsat_1_v5_gn_3_32880 Lactuca sativa HOM05D006509 ORTHO05D008144 1.4e-96 357.1 327 55.7
TWI74G1084 Tripterygium wilfordii HOM05D006509 ORTHO05D008144 1.9e-96 356.7 331 56.2
Prupe.2G212300 Prunus persica HOM05D006509 ORTHO05D008144 4.2e-96 355.5 316 58.9
arahy.Tifrunner.gnm1.ann1.LJ2JSE Arachis hypogaea HOM05D006509 ORTHO05D008144 1.2e-95 354.0 328 58.2
Sed0013319 Sechium edule HOM05D006509 ORTHO05D008144 1.2e-95 354.0 276 62.3
Sc06g0007860 Simmondsia chinensis HOM05D006509 ORTHO05D008144 1.2e-95 354.0 348 55.7
FAN03G0898 Fragaria x ananassa HOM05D006509 ORTHO05D008144 3.6e-95 352.4 280 64.6
Ca_17903_v3 Cicer arietinum L. HOM05D006509 ORTHO05D008144 1.8e-94 350.1 272 64.7
Hund08535 Selenicereus undatus HOM05D006509 ORTHO05D008144 1.8e-94 350.1 276 63.0
arahy.Tifrunner.gnm1.ann1.6728UU Arachis hypogaea HOM05D006509 ORTHO05D008144 5.1e-94 348.6 329 58.1
ClCG09G005710 Citrullus lanatus HOM05D006509 ORTHO05D008144 2.6e-93 346.3 249 67.5
PSO017G6086 Papaver somniferum HOM05D006509 ORTHO05D008144 2.6e-93 346.3 279 63.8
EL10Ac9g22921 Beta vulgaris HOM05D006509 ORTHO05D008144 3.3e-93 345.9 252 66.7
HanXRQChr06g0171951 Helianthus annuus HOM05D006509 ORTHO05D008144 3.3e-93 345.9 325 53.5
PGSC0003DMG400019835 Solanum tuberosum HOM05D006509 ORTHO05D008144 9.7e-93 344.4 247 68.8
arahy.Tifrunner.gnm1.ann1.IV5K9E Arachis hypogaea HOM05D006509 ORTHO05D008144 1.3e-92 344.0 331 57.4
Lj4g0012507 Lotus japonicus HOM05D006509 ORTHO05D008144 1.7e-92 343.6 323 57.9
vmacro14294 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 1.7e-92 343.6 275 62.5
vmacro23064 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 1.7e-92 343.6 275 62.5
arahy.Tifrunner.gnm1.ann1.4V51TJ Arachis hypogaea HOM05D006509 ORTHO05D008144 2.2e-92 343.2 329 56.8
CsaV3_7G029430 Cucumis sativus L. HOM05D006509 ORTHO05D008144 2.2e-92 343.2 249 65.9
DCAR_030403 Daucus carota HOM05D006509 ORTHO05D008144 3.7e-92 342.4 341 54.5
PSO478G1783 Papaver somniferum HOM05D006509 ORTHO05D008144 4.8e-92 342.0 279 62.7
Glyma.05G160301 Glycine max HOM05D006509 ORTHO05D008144 1.1e-91 340.9 253 64.8
Sabra10G0129900 Salix brachista HOM05D006509 ORTHO05D008144 1.1e-91 340.9 334 56.9
Potri.010G170100 Populus trichocarpa HOM05D006509 ORTHO05D008144 1.8e-91 340.1 321 57.6
PGR004G1007 Punica granatum HOM05D006509 ORTHO05D008144 3.1e-91 339.3 302 58.9
Actinidia04136 Actinidia chinensis HOM05D006509 ORTHO05D008144 7.0e-91 338.2 249 65.5
Medtr8g086630 Medicago truncatula HOM05D006509 ORTHO05D008144 1.2e-90 337.4 271 62.4
Lalb_Chr13g0295231 Lupinus albus HOM05D006509 ORTHO05D008144 2.0e-90 336.7 247 65.2
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 1.7e-89 333.6 309 58.3
CDE04G0697 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 2.9e-89 332.8 278 60.8
Solyc02g021050.3 Solanum lycopersicum HOM05D006509 ORTHO05D008144 3.8e-89 332.4 300 59.3
TPR.G6737 Trifolium pratense HOM05D006509 ORTHO05D008144 5.0e-89 332.0 273 61.2
VMungo0251G2215 Vigna mungo HOM05D006509 ORTHO05D008144 4.2e-88 328.9 320 55.3
Phvul.002G240600 Phaseolus vulgaris HOM05D006509 ORTHO05D008144 5.5e-88 328.6 320 55.3
Sopen02g005330 Solanum pennellii HOM05D006509 ORTHO05D008144 5.5e-88 328.6 300 59.0
CDE07G1911 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 8.0e-87 324.7 236 66.5
Aqoxy4G00161 Aquilegia oxysepala HOM05D006509 ORTHO05D008144 1.0e-86 324.3 295 54.6
AUR62014967 Chenopodium quinoa HOM05D003778 ORTHO05D004418 9.7e-85 317.8 216 69.9
SalBow2G3295 Salvia bowleyana HOM05D006509 ORTHO05D008144 1.1e-83 314.3 303 54.5
AUR62017665 Chenopodium quinoa HOM05D006509 ORTHO05D008144 1.8e-83 313.5 244 63.1
MSTRG.22733 Avicennia marina HOM05D006509 ORTHO05D008144 2.4e-83 313.2 245 63.3
Migut.I00780 Erythranthe guttata HOM05D006509 ORTHO05D008144 2.0e-82 310.1 269 57.2
MBI06_g12322_MAGBIO Magnolia biondii HOM05D006509 ORTHO05D008144 5.5e-80 302.0 239 61.5
SGA_v2.0_scaffold5G02679 Striga asiatica HOM05D006509 ORTHO05D008144 3.6e-79 299.3 253 57.7
Psat7g069200 Pisum sativum HOM05D006509 ORTHO05D008144 1.8e-78 297.0 256 58.2
ATR0618G169 Amborella trichopoda HOM05D006509 ORTHO05D008144 2.3e-78 296.6 267 56.6
MELO3C015985.2 Cucumis melo HOM05D006509 ORTHO05D008144 6.8e-78 295.0 289 56.1
Rhsim01G0196900 Rhododendron simsii HOM05D006509 ORTHO05D008144 5.7e-77 292.0 334 48.8
Lj6C721T21 Lonicera japonica HOM05D006509 ORTHO05D008144 2.2e-76 290.0 327 50.5
Migut.I00779 Erythranthe guttata HOM05D006509 ORTHO05D008144 1.3e-73 280.8 244 58.2
Os02g0831200 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 4.5e-66 255.8 232 53.4
COL.COLO4_35800 Corchorus olitorius HOM05D006509 ORTHO05D008144 4.7e-63 245.7 143 83.9
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 1.8e-59 233.8 163 69.3
Zm00001eb259480 Zea mays HOM05D006509 ORTHO05D008144 4.1e-59 232.6 279 46.6
Medtr4g086490 Medicago truncatula HOM05D000001 ORTHO05D000003 7.0e-59 231.9 232 54.3
SEGI_30002 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 1.2e-53 214.5 238 49.2
SEGI_16170 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 1.5e-53 214.2 240 50.8
AUR62015202 Chenopodium quinoa HOM05D006509 ORTHO05D008144 1.3e-52 211.1 158 65.2
Cpa.g.sc63.3 Carica papaya HOM05D006509 ORTHO05D008144 1.7e-49 200.7 187 60.4
Dinv39609 Davidia involucrata HOM05D006509 ORTHO05D008144 5.0e-49 199.1 181 58.0
AUR62014968 Chenopodium quinoa HOM05D006509 ORTHO05D008144 5.6e-48 195.7 136 69.1
Pp3c4_29820 Physcomitrium patens HOM05D006509 ORTHO05D008144 5.6e-48 195.7 253 42.3
FAN10G0955 Fragaria x ananassa HOM05D006509 ORTHO05D008144 9.5e-48 194.9 196 55.1
Mapoly0002s0264 Marchantia polymorpha HOM05D006509 ORTHO05D008144 9.5e-48 194.9 242 43.0
CBR_g57847 Chara braunii HOM05D006509 ORTHO05D008144 3.6e-47 193.0 279 38.0
unitig_747.g21717 Utricularia gibba HOM05D006509 ORTHO05D008144 1.8e-46 190.7 157 59.9
ECA246G0117 Erigeron canadensis HOM05D006509 ORTHO05D008144 1.9e-43 180.6 121 67.8
Cc03_g14920 Coffea canephora HOM05D006509 ORTHO05D008144 1.6e-42 177.6 139 63.3
Glyma.08G117902 Glycine max HOM05D006509 ORTHO05D008144 1.2e-37 161.4 131 59.5
AUR62018171 Chenopodium quinoa HOM05D006509 ORTHO05D008144 3.4e-37 159.8 108 68.5
Os04g0108300 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 1.3e-33 147.9 138 49.3
Cc00_g35200 Coffea canephora HOM05D006509 ORTHO05D008144 4.3e-32 142.9 199 43.2
Oeu049185.1 Olea europaea HOM05D006509 ORTHO05D008144 3.6e-31 139.8 109 67.0
AagrBONN_evm.TU.Sc2ySwM_362.2130 Anthoceros agrestis HOM05D006509 ORTHO05D008144 1.4e-22 111.3 238 32.8
FAN01G0805 Fragaria x ananassa HOM05D006509 ORTHO05D008144 6.4e-20 102.4 64 78.1
Oeu033605.1 Olea europaea HOM05D006509 ORTHO05D008144 1.1e-14 85.1 74 55.4
Ca_19971_v3 Cicer arietinum L. HOM05D000020 ORTHO05D000156 3.4e-13 80.1 75 57.3


User provided reference genes

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