Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib264G0610 Durio zibethinus HOM05D003790 ORTHO05D004481 9.6e-86 320.1 158 100.0
Duzib147G1191 Durio zibethinus HOM05D003790 ORTHO05D004481 3.0e-55 218.8 161 70.8
Thecc.01G102100 Theobroma cacao HOM05D003790 ORTHO05D004481 2.7e-51 205.7 158 69.6
COL.COLO4_09960 Corchorus olitorius HOM05D003790 ORTHO05D004481 9.5e-41 170.6 166 63.9
Duzib138G1652 Durio zibethinus HOM05D003790 ORTHO05D004481 7.3e-33 144.4 170 51.2
Thecc.01G310000 Theobroma cacao HOM05D003790 ORTHO05D004481 1.2e-32 143.7 167 52.1
Duzib133G0291 Durio zibethinus HOM05D003790 ORTHO05D004481 3.2e-28 129.0 168 50.6
Gohir.A07G127400 Gossypium hirsutum HOM05D003790 ORTHO05D004481 3.2e-28 129.0 172 47.1
Nn3g21628 Nelumbo nucifera HOM05D003790 ORTHO05D004481 7.0e-28 127.9 176 46.6
Gorai.001G143000 Gossypium raimondii HOM05D003790 ORTHO05D004481 9.2e-28 127.5 177 45.8
Gorai.007G124700 Gossypium raimondii HOM05D003790 ORTHO05D004481 2.7e-27 125.9 166 47.0
Gohir.D07G131700 Gossypium hirsutum HOM05D003790 ORTHO05D004481 7.8e-27 124.4 177 45.2
Gohir.D11G116500 Gossypium hirsutum HOM05D003790 ORTHO05D004481 1.7e-26 123.2 170 46.5
CiPaw.07G114900 Carya illinoinensis HOM05D003790 ORTHO05D004481 3.9e-26 122.1 169 46.2
Gohir.A11G111300 Gossypium hirsutum HOM05D003790 ORTHO05D004481 1.5e-25 120.2 166 45.8
QL12p028945 Quercus lobata HOM05D003790 ORTHO05D004481 3.1e-23 112.5 161 43.5
Cfa005842 Carpinus fangiana HOM05D003790 ORTHO05D004481 8.9e-23 110.9 173 45.7
Sabra14G0091700 Salix brachista HOM05D003790 ORTHO05D004481 2.0e-22 109.8 174 43.1
CiPaw.08G091700 Carya illinoinensis HOM05D003790 ORTHO05D004481 7.5e-22 107.8 170 45.9
Haze_05008 Corylus avellana HOM05D003790 ORTHO05D004481 1.7e-21 106.7 169 45.0
TAR362G0521 Trochodendron aralioides HOM05D003790 ORTHO05D004481 2.2e-21 106.3 158 43.0
Potri.014G123400 Populus trichocarpa HOM05D003790 ORTHO05D004481 6.4e-21 104.8 175 43.4
Actinidia25835 Actinidia chinensis HOM05D003270 ORTHO05D003662 8.3e-21 104.4 169 39.6
Sabra02G0159000 Salix brachista HOM05D003790 ORTHO05D004481 8.3e-21 104.4 187 40.1
Actinidia21012 Actinidia chinensis HOM05D003790 ORTHO05D004481 1.4e-20 103.6 166 42.8
Manes.01G225600 Manihot esculenta HOM05D003790 ORTHO05D004481 1.4e-20 103.6 164 41.5
Potri.002G198800 Populus trichocarpa HOM05D003790 ORTHO05D004481 1.4e-20 103.6 175 44.6
Eucgr.H01068 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.9e-20 103.2 164 40.2
Lalb_Chr02g0146651 Lupinus albus HOM05D003790 ORTHO05D004481 1.9e-20 103.2 166 42.2
Gohir.A12G126700 Gossypium hirsutum HOM05D003790 ORTHO05D004481 4.1e-20 102.1 171 42.7
Gorai.008G141400 Gossypium raimondii HOM05D003790 ORTHO05D004481 4.1e-20 102.1 169 42.6
Cpa.g.sc18.4 Carica papaya HOM05D003790 ORTHO05D004481 2.0e-19 99.8 177 40.7
PSO210G7449 Papaver somniferum HOM05D003790 ORTHO05D004481 2.0e-19 99.8 173 41.0
CANSAT25G2552 Cannabis sativa HOM05D003790 ORTHO05D004481 2.7e-19 99.4 178 37.1
VMungo0720G2360 Vigna mungo HOM05D003790 ORTHO05D004481 3.5e-19 99.0 171 39.8
Aqoxy2G02808 Aquilegia oxysepala HOM05D003790 ORTHO05D004481 4.6e-19 98.6 177 39.0
PSO761G0583 Papaver somniferum HOM05D003790 ORTHO05D004481 1.0e-18 97.4 175 39.4
Sed0026960 Sechium edule HOM05D003790 ORTHO05D004481 1.7e-18 96.7 166 39.8
Eucgr.L02691 Eucalyptus grandis HOM05D003790 ORTHO05D004481 3.9e-18 95.5 162 43.2
CARHR001970 Cardamine hirsuta HOM05D003790 ORTHO05D004481 5.0e-18 95.1 174 40.2
Lalb_Chr06g0166611 Lupinus albus HOM05D003790 ORTHO05D004481 6.6e-18 94.7 171 39.2
Sp6g02070 Schrenkiella parvula HOM05D003790 ORTHO05D004481 6.6e-18 94.7 169 41.4
DCAR_018309 Daucus carota HOM05D003790 ORTHO05D004481 1.1e-17 94.0 166 38.0
C05p01360 Brassica napus HOM05D003790 ORTHO05D004481 1.5e-17 93.6 177 38.4
PGR119G2399 Punica granatum HOM05D003790 ORTHO05D004481 1.5e-17 93.6 169 42.6
TPR.G7317 Trifolium pratense HOM05D003790 ORTHO05D004481 1.5e-17 93.6 169 40.2
Eucgr.L01709 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.9e-17 93.2 165 38.8
Glyma.02G014300 Glycine max HOM05D003790 ORTHO05D004481 1.9e-17 93.2 177 38.4
Glyma.10G015000 Glycine max HOM05D003790 ORTHO05D004481 1.9e-17 93.2 173 38.2
BraA03t12296Z Brassica rapa HOM05D003790 ORTHO05D004481 2.5e-17 92.8 174 42.0
ClCG09G005270 Citrullus lanatus HOM05D003790 ORTHO05D004481 2.5e-17 92.8 165 37.6
Lj2P1202T13 Lonicera japonica HOM05D003790 ORTHO05D004481 3.3e-17 92.4 177 39.0
Phvul.007G216200 Phaseolus vulgaris HOM05D003790 ORTHO05D004481 3.3e-17 92.4 174 39.1
TWI36G1341 Tripterygium wilfordii HOM05D003790 ORTHO05D004481 3.3e-17 92.4 171 40.9
Ah.11g049420 Amaranthus hybridus HOM05D003790 ORTHO05D004481 5.6e-17 91.7 160 39.4
BcaC07g42307 Brassica carinata HOM05D003790 ORTHO05D004481 5.6e-17 91.7 172 40.7
A10p01380 Brassica napus HOM05D003790 ORTHO05D004481 5.6e-17 91.7 174 40.8
BraA10t42414Z Brassica rapa HOM05D003790 ORTHO05D004481 5.6e-17 91.7 174 40.8
A03p31160 Brassica napus HOM05D003790 ORTHO05D004481 7.3e-17 91.3 170 40.0
TWI75G0985 Tripterygium wilfordii HOM05D003790 ORTHO05D004481 7.3e-17 91.3 155 41.9
AL6G50980 Arabidopsis lyrata HOM05D003790 ORTHO05D004481 9.5e-17 90.9 168 36.9
BolC5t28918H Brassica oleracea HOM05D003790 ORTHO05D004481 9.5e-17 90.9 177 37.9
AT4G02170 Arabidopsis thaliana HOM05D003790 ORTHO05D004481 1.2e-16 90.5 168 38.1
Ca_10301_v3 Cicer arietinum L. HOM05D003790 ORTHO05D004481 1.2e-16 90.5 162 38.9
Carub.0001s0174 Capsella rubella HOM05D003790 ORTHO05D004481 1.6e-16 90.1 174 37.4
Eucgr.E02370 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.1e-16 89.7 160 40.0
Thhalv10029373m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 2.1e-16 89.7 174 38.5
Lj1C20T16 Lonicera japonica HOM05D003790 ORTHO05D004481 2.1e-16 89.7 172 39.0
TAR633G1354 Trochodendron aralioides HOM05D003790 ORTHO05D004481 2.1e-16 89.7 170 40.0
AT5G38700 Arabidopsis thaliana HOM05D003790 ORTHO05D004481 2.8e-16 89.4 175 37.1
Thhalv10009571m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 2.8e-16 89.4 175 40.0
Nitab4.5_0010548g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 2.8e-16 89.4 172 39.0
BcaB01g02435 Brassica carinata HOM05D003790 ORTHO05D004481 3.6e-16 89.0 172 39.0
BcaB03g15798 Brassica carinata HOM05D003790 ORTHO05D004481 3.6e-16 89.0 173 39.3
Ciclev10022416m.g Citrus clementina HOM05D003790 ORTHO05D004481 3.6e-16 89.0 177 38.4
THA.LOC104801296 Tarenaya hassleriana HOM05D003790 ORTHO05D004481 3.6e-16 89.0 170 37.1
A09p68580 Brassica napus HOM05D003790 ORTHO05D004481 4.7e-16 88.6 172 39.5
BraA09t42201Z Brassica rapa HOM05D003790 ORTHO05D004481 4.7e-16 88.6 172 39.5
Lj1C20T6 Lonicera japonica HOM05D003790 ORTHO05D004481 4.7e-16 88.6 171 38.0
PGR119G1194 Punica granatum HOM05D003790 ORTHO05D004481 6.2e-16 88.2 173 37.6
BcaC07g42401 Brassica carinata HOM05D003790 ORTHO05D004481 8.1e-16 87.8 167 39.5
Nitab4.5_0017359g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 8.1e-16 87.8 181 37.0
Hma1.2p1_1302F.1_g274340 Hydrangea macrophylla HOM05D003790 ORTHO05D004481 1.1e-15 87.4 179 36.3
Medtr1g087710 Medicago truncatula HOM05D003790 ORTHO05D004481 1.1e-15 87.4 169 40.2
BcaC01g06770 Brassica carinata HOM05D003790 ORTHO05D004481 1.4e-15 87.0 170 37.6
BcaC01g06771 Brassica carinata HOM05D003790 ORTHO05D004481 1.4e-15 87.0 170 37.6
C03p38000 Brassica napus HOM05D003790 ORTHO05D004481 1.4e-15 87.0 170 37.6
CsaV3_7G029800 Cucumis sativus L. HOM05D003790 ORTHO05D004481 1.4e-15 87.0 170 34.7
SGA_v2.0_scaffold198G41126 Striga asiatica HOM05D003790 ORTHO05D004481 1.4e-15 87.0 173 38.7
TAR633G0094 Trochodendron aralioides HOM05D003790 ORTHO05D004481 1.4e-15 87.0 169 37.9
Aa31LG5G1840 Aethionema arabicum HOM05D003790 ORTHO05D004481 1.8e-15 86.7 171 40.4
Eucgr.H01062 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.8e-15 86.7 151 39.7
PGSC0003DMG400037362 Solanum tuberosum HOM05D003790 ORTHO05D004481 1.8e-15 86.7 166 37.3
BolC3t16086H Brassica oleracea HOM05D003790 ORTHO05D004481 2.3e-15 86.3 170 37.6
Rhsim01G0289200 Rhododendron simsii HOM05D003790 ORTHO05D004481 2.3e-15 86.3 170 38.8
Sed0014571 Sechium edule HOM05D003790 ORTHO05D004481 2.3e-15 86.3 163 38.0
vmacro02415 Vaccinium macrocarpon HOM05D003790 ORTHO05D004481 2.3e-15 86.3 173 35.8
Sp1g01670 Schrenkiella parvula HOM05D003790 ORTHO05D004481 3.1e-15 85.9 176 39.2
Eucgr.H01059 Eucalyptus grandis HOM05D003790 ORTHO05D004481 4.0e-15 85.5 165 37.6
Oeu005872.1 Olea europaea HOM05D003790 ORTHO05D004481 4.0e-15 85.5 171 36.3
Atru.chr5.1052 Acer truncatum HOM05D003790 ORTHO05D004481 5.2e-15 85.1 166 38.6
Nitab4.5_0000116g0070 Nicotiana tabacum HOM05D003790 ORTHO05D004481 5.2e-15 85.1 180 37.2
PGR119G2441 Punica granatum HOM05D003790 ORTHO05D004481 5.2e-15 85.1 173 37.6
Rhsim13G0006400 Rhododendron simsii HOM05D003790 ORTHO05D004481 5.2e-15 85.1 174 34.5
Carub.0006s3500 Capsella rubella HOM05D003790 ORTHO05D004481 8.9e-15 84.3 183 36.1
MELO3C015941.2 Cucumis melo HOM05D003790 ORTHO05D004481 8.9e-15 84.3 166 34.9
Oeu005873.1 Olea europaea HOM05D003790 ORTHO05D004481 8.9e-15 84.3 170 36.5
COL.COLO4_23265 Corchorus olitorius HOM05D003790 ORTHO05D004481 1.2e-14 84.0 132 43.2
CAN.G69.5 Capsicum annuum HOM05D003790 ORTHO05D004481 2.0e-14 83.2 177 39.5
FAN04G0217 Fragaria x ananassa HOM05D003790 ORTHO05D004481 2.0e-14 83.2 189 33.9
AL1G12020 Arabidopsis lyrata HOM05D003790 ORTHO05D004481 2.6e-14 82.8 168 36.3
Sc17g0000570 Simmondsia chinensis HOM05D003790 ORTHO05D004481 2.6e-14 82.8 167 35.3
PGSC0003DMG400009002 Solanum tuberosum HOM05D003790 ORTHO05D004481 2.6e-14 82.8 172 37.8
C08p53190 Brassica napus HOM05D003790 ORTHO05D004481 3.4e-14 82.4 174 39.1
BolC8t52834H Brassica oleracea HOM05D003790 ORTHO05D004481 3.4e-14 82.4 174 39.1
ECA248G3170 Erigeron canadensis HOM05D003790 ORTHO05D004481 4.4e-14 82.0 171 37.4
RcHm_v2.0_Chr7g0241911 Rosa chinensis HOM05D003790 ORTHO05D004481 4.4e-14 82.0 175 33.7
Cc08_g11830 Coffea canephora HOM05D003790 ORTHO05D004481 5.8e-14 81.6 204 35.8
HanXRQChr01g0000871 Helianthus annuus HOM05D003790 ORTHO05D004481 5.8e-14 81.6 170 39.4
Eucgr.H01065 Eucalyptus grandis HOM05D003790 ORTHO05D004481 9.8e-14 80.9 153 39.2
HanXRQChr05g0137341 Helianthus annuus HOM05D003790 ORTHO05D004481 9.8e-14 80.9 167 37.1
Peaxi162Scf00001g00262 Petunia axillaris HOM05D003790 ORTHO05D004481 9.8e-14 80.9 190 35.3
FvH4_5g39610 Fragaria vesca HOM05D003790 ORTHO05D004481 4.9e-13 78.6 181 34.3
FAN08G1995 Fragaria x ananassa HOM05D003790 ORTHO05D004481 4.9e-13 78.6 181 34.3
FAN18G0157 Fragaria x ananassa HOM05D003790 ORTHO05D004481 4.9e-13 78.6 181 34.3
Lsat_1_v5_gn_9_541 Lactuca sativa HOM05D003790 ORTHO05D004481 4.9e-13 78.6 165 37.6
FAN13G3073 Fragaria x ananassa HOM05D003790 ORTHO05D004481 6.4e-13 78.2 178 36.0
Peaxi162Scf00001g00254 Petunia axillaris HOM05D003790 ORTHO05D004481 6.4e-13 78.2 180 36.1
HanXRQChr05g0137351 Helianthus annuus HOM05D003790 ORTHO05D004481 8.3e-13 77.8 167 36.5
Nitab4.5_0025993g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 1.1e-12 77.4 181 35.9
Peaxi162Scf00001g00263 Petunia axillaris HOM05D003790 ORTHO05D004481 1.9e-12 76.6 183 36.6
Sopen01g031440 Solanum pennellii HOM05D003790 ORTHO05D004481 2.4e-12 76.3 176 34.7
Eucgr.K03524 Eucalyptus grandis HOM05D003790 ORTHO05D004481 5.4e-12 75.1 168 33.3
EL10As5g23497 Beta vulgaris HOM05D003790 ORTHO05D004481 7.1e-12 74.7 171 35.1
Sopen01g031450 Solanum pennellii HOM05D003790 ORTHO05D004481 7.1e-12 74.7 168 36.3
Nitab4.5_0000116g0080 Nicotiana tabacum HOM05D003790 ORTHO05D004481 9.2e-12 74.3 175 35.4
Gohir.D12G130100 Gossypium hirsutum HOM05D003790 ORTHO05D004481 1.6e-11 73.6 113 43.4
Solyc01g079670.2 Solanum lycopersicum HOM05D003790 ORTHO05D004481 2.1e-11 73.2 163 35.0
Solyc01g079660.2 Solanum lycopersicum HOM05D003790 ORTHO05D004481 2.7e-11 72.8 174 34.5
Eucgr.L01710 Eucalyptus grandis HOM05D003790 ORTHO05D004481 4.6e-11 72.0 155 37.4
Eucgr.L01711 Eucalyptus grandis HOM05D003790 ORTHO05D004481 4.6e-11 72.0 109 37.6
HPP92_025189 Vanilla planifolia HOM05D003790 ORTHO05D004481 5.1e-10 68.6 177 33.3
Dinv10067 Davidia involucrata HOM05D003790 ORTHO05D004481 8.6e-10 67.8 167 35.3
Oeu008329.1 Olea europaea HOM05D003790 ORTHO05D004481 1.5e-09 67.0 170 32.9
HPP92_011875 Vanilla planifolia HOM05D003790 ORTHO05D004481 1.9e-09 66.6 164 29.3
Eucgr.L02503 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.5e-09 66.2 151 36.4
Prupe.8G269600 Prunus persica HOM05D003790 ORTHO05D004481 4.3e-09 65.5 167 35.3
Actinidia21418 Actinidia chinensis HOM05D003790 ORTHO05D004481 5.6e-09 65.1 116 39.7
CARHR250350 Cardamine hirsuta HOM05D003790 ORTHO05D004481 5.6e-09 65.1 113 38.9
Migut.D00101 Erythranthe guttata HOM05D003790 ORTHO05D004481 1.2e-08 63.9 164 30.5
Dinv33098 Davidia involucrata HOM05D003790 ORTHO05D004481 4.7e-08 62.0 188 33.5
HPP92_006897 Vanilla planifolia HOM05D003790 ORTHO05D004481 1.1e-07 60.8 168 35.1
Os03g0302800 Oryza sativa ssp. japonica HOM05D003790 ORTHO05D004481 1.4e-07 60.5 186 29.0
SalBow2G3380 Salvia bowleyana HOM05D003790 ORTHO05D004481 1.4e-07 60.5 86 43.0
MD11G1317200 Malus domestica HOM05D003790 ORTHO05D004481 3.1e-07 59.3 205 29.3
AUR62024684 Chenopodium quinoa HOM05D003790 ORTHO05D004481 1.5e-06 57.0 167 31.7
Oeu008453.1 Olea europaea HOM05D003688 ORTHO05D004481 4.4e-06 55.5 157 33.1


User provided reference genes

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