Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib264G0505 Durio zibethinus HOM05D005603 ORTHO05D006944 1.1e-217 759.6 362 100.0
COL.COLO4_21962 Corchorus olitorius HOM05D005603 ORTHO05D006944 9.0e-204 713.4 400 87.5
Gohir.A02G169100 Gossypium hirsutum HOM05D005603 ORTHO05D006944 8.4e-202 706.8 400 86.2
Gohir.D03G010900 Gossypium hirsutum HOM05D005603 ORTHO05D006944 1.4e-201 706.1 400 86.0
Gorai.003G011300 Gossypium raimondii HOM05D005603 ORTHO05D006944 1.4e-201 706.1 400 86.0
Thecc.01G023100 Theobroma cacao HOM05D005603 ORTHO05D006944 6.2e-197 690.6 400 85.0
MD15G1249000 Malus domestica HOM05D005603 ORTHO05D006944 3.4e-195 684.9 401 83.5
Prupe.7G165200 Prunus persica HOM05D005603 ORTHO05D006944 5.8e-195 684.1 403 82.9
Duzib147G0771 Durio zibethinus HOM05D005603 ORTHO05D006944 4.9e-194 681.0 387 85.8
Lj4C215G4 Lonicera japonica HOM05D005603 ORTHO05D006944 3.2e-193 678.3 365 88.5
FvH4_1g12160 Fragaria vesca HOM05D005603 ORTHO05D006944 1.0e-191 673.3 403 81.1
CiPaw.07G056000 Carya illinoinensis HOM05D005603 ORTHO05D006944 3.9e-191 671.4 404 82.2
Ca_24898_v3 Cicer arietinum L. HOM05D005603 ORTHO05D006944 3.9e-191 671.4 405 81.0
Glyma.01G168600 Glycine max HOM05D005603 ORTHO05D006944 1.5e-190 669.5 405 80.7
MD02G1111100 Malus domestica HOM05D005603 ORTHO05D006944 1.9e-190 669.1 401 81.8
QL06p033966 Quercus lobata HOM05D005603 ORTHO05D006944 2.5e-190 668.7 402 81.6
CANSAT01G2298 Cannabis sativa HOM05D005603 ORTHO05D006944 9.6e-190 666.8 397 81.9
Eucgr.I02369 Eucalyptus grandis HOM05D005603 ORTHO05D006944 9.6e-190 666.8 403 80.6
TPR.G2333 Trifolium pratense HOM05D005603 ORTHO05D006944 9.6e-190 666.8 405 80.2
Medtr5g021520 Medicago truncatula HOM05D005603 ORTHO05D006944 2.8e-189 665.2 406 80.5
Psat2g155920 Pisum sativum HOM05D005603 ORTHO05D006944 2.8e-189 665.2 405 80.5
Glyma.11G074800 Glycine max HOM05D005603 ORTHO05D006944 8.1e-189 663.7 405 80.0
Phvul.002G111500 Phaseolus vulgaris HOM05D005603 ORTHO05D006944 1.1e-188 663.3 405 80.0
Manes.02G101300 Manihot esculenta HOM05D005603 ORTHO05D006944 2.4e-188 662.1 398 82.4
VMungo1215G2039 Vigna mungo HOM05D005603 ORTHO05D006944 5.3e-188 661.0 404 80.0
RcHm_v2.0_Chr2g0099911 Rosa chinensis HOM05D005603 ORTHO05D006944 1.2e-187 659.8 403 80.6
TWI09G0997 Tripterygium wilfordii HOM05D005603 ORTHO05D006944 1.0e-186 656.8 399 80.2
arahy.Tifrunner.gnm1.ann1.V913IW Arachis hypogaea HOM05D005603 ORTHO05D006944 1.7e-186 656.0 405 80.0
CSS0040106 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 1.7e-186 656.0 404 80.9
Sopen02g029190 Solanum pennellii HOM05D005603 ORTHO05D006944 2.2e-186 655.6 403 79.9
HanXRQChr16g0531111 Helianthus annuus HOM05D005603 ORTHO05D006944 2.9e-186 655.2 402 79.9
Nitab4.5_0008176g0030 Nicotiana tabacum HOM05D005603 ORTHO05D006944 8.4e-186 653.7 418 77.5
Lj2g0023828 Lotus japonicus HOM05D005603 ORTHO05D006944 1.1e-185 653.3 410 79.3
MELO3C007885.2 Cucumis melo HOM05D005603 ORTHO05D006944 1.4e-185 652.9 400 79.2
CsaV3_6G046890 Cucumis sativus L. HOM05D005603 ORTHO05D006944 1.4e-185 652.9 400 79.5
Potri.005G117200 Populus trichocarpa HOM05D005603 ORTHO05D006944 1.9e-185 652.5 398 80.9
Sc03g0003440 Simmondsia chinensis HOM05D005603 ORTHO05D006944 1.9e-185 652.5 401 79.3
THA.LOC104819186 Tarenaya hassleriana HOM05D005603 ORTHO05D006944 1.9e-185 652.5 399 78.7
TAR628G0819 Trochodendron aralioides HOM05D005603 ORTHO05D006944 2.5e-185 652.1 402 79.4
Nn5g29214 Nelumbo nucifera HOM05D005603 ORTHO05D006944 3.2e-185 651.7 402 80.3
Aqoxy5G01490 Aquilegia oxysepala HOM05D005603 ORTHO05D006944 5.5e-185 651.0 401 79.6
ClCG01G020120 Citrullus lanatus HOM05D005603 ORTHO05D006944 3.5e-184 648.3 399 79.4
Hma1.2p1_0743F.1_g211450 Hydrangea macrophylla HOM05D005603 ORTHO05D006944 3.5e-184 648.3 415 79.0
Ciclev10025760m.g Citrus clementina HOM05D005603 ORTHO05D006944 1.8e-183 646.0 401 78.6
Sed0002868 Sechium edule HOM05D005603 ORTHO05D006944 2.3e-183 645.6 399 78.9
GSVIVG01018824001 Vitis vinifera HOM05D005603 ORTHO05D006944 1.5e-182 642.9 390 80.8
arahy.Tifrunner.gnm1.ann1.8YZ064 Arachis hypogaea HOM05D005603 ORTHO05D006944 1.9e-182 642.5 434 74.7
ATR0620G128 Amborella trichopoda HOM05D005603 ORTHO05D006944 4.3e-182 641.3 403 77.9
Aa31LG4G19220 Aethionema arabicum HOM05D005603 ORTHO05D006944 1.3e-181 639.8 400 76.5
MSTRG.15764 Avicennia marina HOM05D005603 ORTHO05D006944 1.3e-181 639.8 402 78.6
TAR376G0194 Trochodendron aralioides HOM05D005603 ORTHO05D006944 1.3e-181 639.8 403 78.7
SGA_v2.0_scaffold47G17673 Striga asiatica HOM05D005603 ORTHO05D006944 2.8e-181 638.6 409 78.0
AT3G51130 Arabidopsis thaliana HOM05D005603 ORTHO05D006944 3.7e-181 638.3 400 75.2
AL5G31550 Arabidopsis lyrata HOM05D005603 ORTHO05D006944 4.8e-181 637.9 400 75.5
Hund14030 Selenicereus undatus HOM05D005603 ORTHO05D006944 6.3e-181 637.5 401 77.3
Carub.0005s1753 Capsella rubella HOM05D005603 ORTHO05D006944 8.2e-181 637.1 400 75.0
DCAR_021493 Daucus carota HOM05D005603 ORTHO05D006944 8.2e-181 637.1 404 77.7
AUR62007651 Chenopodium quinoa HOM05D005603 ORTHO05D006944 1.8e-180 636.0 401 77.1
Lsat_1_v5_gn_3_73720 Lactuca sativa HOM05D005603 ORTHO05D006944 1.8e-180 636.0 397 78.8
PSO541G2355 Papaver somniferum HOM05D005603 ORTHO05D006944 3.1e-180 635.2 403 77.7
PSO675G2068 Papaver somniferum HOM05D005603 ORTHO05D006944 3.1e-180 635.2 403 77.7
Potri.007G015800 Populus trichocarpa HOM05D005603 ORTHO05D006944 3.1e-180 635.2 399 78.7
CDE05G2538 Ceratophyllum demersum HOM05D005603 ORTHO05D006944 1.2e-179 633.3 402 77.1
Thhalv10010418m.g Eutrema salsugineum HOM05D005603 ORTHO05D006944 2.0e-179 632.5 400 75.0
Nitab4.5_0000912g0020 Nicotiana tabacum HOM05D005603 ORTHO05D006944 2.2e-178 629.0 410 76.6
Oeu035330.1 Olea europaea HOM05D005603 ORTHO05D006944 2.9e-178 628.6 403 77.2
PGSC0003DMG400003547 Solanum tuberosum HOM05D005603 ORTHO05D006944 3.8e-178 628.2 389 78.9
ECA246G4842 Erigeron canadensis HOM05D005603 ORTHO05D006944 6.5e-178 627.5 390 79.0
Cc07_g10420 Coffea canephora HOM05D005603 ORTHO05D006944 8.5e-178 627.1 391 79.0
Sp5g11080 Schrenkiella parvula HOM05D005603 ORTHO05D006944 1.1e-177 626.7 400 74.5
FAN28G0526 Fragaria x ananassa HOM05D005603 ORTHO05D006944 7.2e-177 624.0 403 76.9
Peaxi162Scf00083g01233 Petunia axillaris HOM05D005603 ORTHO05D006944 1.2e-176 623.2 395 78.0
Migut.L00039 Erythranthe guttata HOM05D005603 ORTHO05D006944 1.6e-176 622.9 403 76.4
BcaC06g33053 Brassica carinata HOM05D005603 ORTHO05D006944 2.1e-176 622.5 399 74.9
EL10As8g23850 Beta vulgaris HOM05D005603 ORTHO05D006944 6.1e-176 620.9 396 76.3
Cpa.g.sc6.214 Carica papaya HOM05D005603 ORTHO05D006944 3.0e-175 618.6 404 77.5
Sed0017160 Sechium edule HOM05D005603 ORTHO05D006944 3.9e-175 618.2 402 75.9
Hund16476 Selenicereus undatus HOM05D005603 ORTHO05D006944 1.9e-174 615.9 432 72.0
SalBow8G5567 Salvia bowleyana HOM05D005603 ORTHO05D006944 5.7e-174 614.4 414 76.1
CARHR160730 Cardamine hirsuta HOM05D005603 ORTHO05D006944 1.3e-173 613.2 400 72.5
Haze_03808 Corylus avellana HOM05D005603 ORTHO05D006944 1.3e-173 613.2 401 76.6
FAN23G1635 Fragaria x ananassa HOM05D005603 ORTHO05D006944 6.3e-173 610.9 397 76.1
CSS0042462 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 3.1e-172 608.6 401 76.8
A03p48150 Brassica napus HOM05D005603 ORTHO05D006944 6.9e-172 607.4 383 74.9
BraA03t13922Z Brassica rapa HOM05D005603 ORTHO05D006944 6.9e-172 607.4 383 74.9
Os06g0714000 Oryza sativa ssp. japonica HOM05D005603 ORTHO05D006944 6.9e-172 607.4 398 74.9
CSS0001882 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 3.4e-171 605.1 401 76.3
CAN.G358.2 Capsicum annuum HOM05D005603 ORTHO05D006944 1.3e-170 603.2 391 75.4
BolC7t45134H Brassica oleracea HOM05D005603 ORTHO05D006944 8.5e-170 600.5 385 74.5
FAN19G0288 Fragaria x ananassa HOM05D005603 ORTHO05D006944 1.0e-167 593.6 387 75.7
Rhsim08G0035200 Rhododendron simsii HOM05D005603 ORTHO05D006944 1.0e-167 593.6 415 72.3
HPP92_025419 Vanilla planifolia HOM05D005603 ORTHO05D006944 6.7e-167 590.9 399 73.7
C07p46180 Brassica napus HOM05D005603 ORTHO05D006944 3.7e-165 585.1 406 70.4
Sabra05G0096200 Salix brachista HOM05D005603 ORTHO05D006944 2.4e-164 582.4 398 74.1
FAN26G2705 Fragaria x ananassa HOM05D005603 ORTHO05D006944 4.1e-164 581.6 380 75.8
TWI53G1238 Tripterygium wilfordii HOM05D005603 ORTHO05D006944 4.1e-164 581.6 366 77.9
BraA09t39879Z Brassica rapa HOM05D005603 ORTHO05D006944 2.6e-163 578.9 384 71.6
A09p44190 Brassica napus HOM05D005603 ORTHO05D006944 5.9e-163 577.8 384 71.4
BolC8t50258H Brassica oleracea HOM05D005603 ORTHO05D006944 2.9e-162 575.5 384 71.1
MSTRG.3829 Avicennia marina HOM05D005603 ORTHO05D006944 1.2e-160 570.1 403 70.5
BcaB01g00547 Brassica carinata HOM05D005603 ORTHO05D006944 1.1e-158 563.5 372 71.8
unitig_32.g11821 Utricularia gibba HOM05D005603 ORTHO05D006944 3.7e-157 558.5 385 72.5
Zm00001eb227930 Zea mays HOM05D005603 ORTHO05D006944 1.0e-154 550.4 398 69.6
Sabra07G0013000 Salix brachista HOM05D005603 ORTHO05D006944 2.2e-154 549.3 401 69.8
vmacro22086 Vaccinium macrocarpon HOM05D005603 ORTHO05D006944 2.2e-154 549.3 357 74.8
C08p26410 Brassica napus HOM05D005603 ORTHO05D006944 1.3e-149 533.5 353 71.7
vmacro18394 Vaccinium macrocarpon HOM05D005603 ORTHO05D006944 1.7e-146 523.1 346 74.0
Ah.02g124640 Amaranthus hybridus HOM05D005603 ORTHO05D006944 1.2e-144 516.9 358 71.5
Lalb_Chr16g0377611 Lupinus albus HOM05D005603 ORTHO05D006944 1.6e-144 516.5 321 77.9
Pp3c10_8990 Physcomitrium patens HOM05D005603 ORTHO05D006944 2.5e-137 492.7 394 62.4
AagrBONN_evm.TU.Sc2ySwM_228.543 Anthoceros agrestis HOM05D005603 ORTHO05D006944 7.2e-137 491.1 398 61.6
SMO117G0153 Selaginella moellendorffii HOM05D005603 ORTHO05D006944 4.7e-136 488.4 391 61.4
Pp3c2_6370 Physcomitrium patens HOM05D005603 ORTHO05D006944 1.4e-135 486.9 393 61.8
Dinv40059 Davidia involucrata HOM05D005603 ORTHO05D006944 1.2e-131 473.8 305 77.7
Dinv33602 Davidia involucrata HOM05D005603 ORTHO05D006944 1.9e-129 466.5 306 76.8
SEGI_22640 Sequoiadendron giganteum HOM05D005603 ORTHO05D006944 1.0e-127 460.7 345 66.7
Actinidia31012 Actinidia chinensis HOM05D005603 ORTHO05D006944 1.8e-124 449.9 306 75.5
Mapoly0152s0028 Marchantia polymorpha HOM05D005603 ORTHO05D006944 6.2e-120 434.9 400 55.8
Mapoly0094s0075 Marchantia polymorpha HOM05D005603 ORTHO05D006944 7.5e-118 427.9 391 55.8
SMO037G0002 Selaginella moellendorffii HOM05D005603 ORTHO05D006944 9.6e-97 357.8 259 65.3
Lalb_Chr09g0321921 Lupinus albus HOM05D005603 ORTHO05D006944 6.2e-96 355.1 242 74.4
Migut.H02480 Erythranthe guttata HOM05D005603 ORTHO05D006944 2.1e-91 340.1 330 58.2
Nn015s41468 Nelumbo nucifera HOM05D005603 ORTHO05D006944 1.5e-86 323.9 170 89.4
Actinidia26078 Actinidia chinensis HOM05D005603 ORTHO05D006944 8.4e-85 318.2 218 75.2
Lalb_Chr09g0321931 Lupinus albus HOM05D005603 ORTHO05D006944 3.9e-82 309.3 160 90.0
CBR_g36682 Chara braunii HOM05D005603 ORTHO05D000002 2.1e-80 303.5 225 65.8
Solyc02g075630.3 Solanum lycopersicum HOM05D005603 ORTHO05D006944 4.3e-73 279.3 208 68.8
Nn015s41469 Nelumbo nucifera HOM05D005603 ORTHO05D006944 8.2e-72 275.0 146 88.4
PRCOL_00000516 Prasinoderma coloniale HOM05D005603 ORTHO05D006944 2.2e-64 250.4 433 36.3
Atru.chr3.766 Acer truncatum HOM05D005603 ORTHO05D006944 2.8e-64 250.0 184 67.9
Atru.chr2.40 Acer truncatum HOM05D005603 ORTHO05D006944 1.7e-45 187.6 189 55.0
BcaC06g33054 Brassica carinata HOM05D005603 ORTHO05D006944 6.3e-40 169.1 103 77.7
CBR_g36680 Chara braunii HOM05D005603 ORTHO05D006944 6.7e-34 149.1 172 47.7
Actinidia31013 Actinidia chinensis HOM05D005603 ORTHO05D006944 1.1e-31 141.7 72 90.3
RcHm_v2.0_Chr7g0231521 Rosa chinensis HOM05D005603 ORTHO05D006944 9.1e-23 112.1 185 40.5
Cfa027245 Carpinus fangiana HOM05D005603 ORTHO05D006944 4.9e-16 89.7 285 27.7
COL.COLO4_32114 Corchorus olitorius HOM05D000931 ORTHO05D002226 2.9e-08 63.9 51 62.7


User provided reference genes

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