Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib264G0142 Durio zibethinus HOM05D010821 ORTHO05D012260 0.0e+00 2257.3 1368 100.0
Thecc.04G017000 Theobroma cacao HOM05D010821 ORTHO05D012260 0.0e+00 1184.5 1908 47.3
Duzib147G0652 Durio zibethinus HOM05D010821 ORTHO05D029264 1.4e-270 937.2 1668 46.2
Duzib187G0380 Durio zibethinus HOM05D010821 ORTHO05D012260 1.2e-248 864.4 1247 50.4
Gohir.A07G223100 Gossypium hirsutum HOM05D010821 ORTHO05D029264 7.0e-233 812.0 1490 45.1
Gohir.D07G229800 Gossypium hirsutum HOM05D010821 ORTHO05D029264 4.5e-232 809.3 1489 45.0
Gorai.001G264900 Gossypium raimondii HOM05D010821 ORTHO05D029264 3.4e-227 793.1 1489 44.6
COL.COLO4_29109 Corchorus olitorius HOM05D010821 ORTHO05D012260 1.4e-196 691.4 1503 43.2
Duzib147G1461 Durio zibethinus HOM05D010821 ORTHO05D012260 1.4e-164 585.1 1056 44.5
Gohir.A05G355900 Gossypium hirsutum HOM05D010821 ORTHO05D012260 9.5e-97 359.8 1402 33.3
Gorai.012G064000 Gossypium raimondii HOM05D010821 ORTHO05D012260 2.1e-96 358.6 1489 32.9
Gohir.D04G057300 Gossypium hirsutum HOM05D010821 ORTHO05D012260 2.3e-90 338.6 1487 31.4
Duzib187G0676 Durio zibethinus HOM05D010821 ORTHO05D012260 1.2e-54 219.9 300 51.0
Dinv35105 Davidia involucrata HOM05D008944 ORTHO05D012715 4.1e-39 168.3 1118 26.9
Gohir.D07G120566 Gossypium hirsutum HOM05D010821 ORTHO05D012260 1.7e-37 162.9 432 36.8
TAR622G0869 Trochodendron aralioides HOM05D008944 ORTHO05D012260 4.8e-32 144.8 304 43.1
Gorai.011G147500 Gossypium raimondii HOM05D010821 ORTHO05D012260 2.2e-29 136.0 317 41.6
CSS0002578 Camellia sinensis var. sinensis HOM05D008944 ORTHO05D012715 3.0e-26 125.6 1151 25.5
Hma1.2p1_0999F.1_g246230 Hydrangea macrophylla HOM05D008944 ORTHO05D012260 3.9e-26 125.2 252 42.1
Gorai.009G306800 Gossypium raimondii HOM05D010821 ORTHO05D012260 2.2e-24 119.4 223 46.6
Lju41A41T31 Lonicera japonica HOM05D008944 ORTHO05D012260 9.1e-23 114.0 244 40.6
GSVIVG01032411001 Vitis vinifera HOM05D000662 ORTHO05D012715 2.9e-21 109.0 1092 27.7
Haze_14737 Corylus avellana HOM05D018456 ORTHO05D024862 2.5e-20 105.9 1411 24.4
Cfa007371 Carpinus fangiana HOM05D018456 ORTHO05D024862 2.3e-18 99.4 1411 25.7
Atru.chr6.2390 Acer truncatum HOM05D008944 ORTHO05D012260 3.0e-18 99.0 1576 23.0
Dinv33443 Davidia involucrata HOM05D008944 ORTHO05D012715 4.4e-17 95.1 1095 24.6
Gorai.008G044500 Gossypium raimondii HOM05D010821 ORTHO05D012260 2.7e-14 85.9 297 34.0
Cpa.g.sc108.66 Carica papaya HOM05D008944 ORTHO05D012260 4.5e-14 85.1 262 32.8
Nitab4.5_0007124g0010 Nicotiana tabacum HOM05D012441 ORTHO05D013726 5.9e-14 84.7 304 30.6
CiPaw.03G043400 Carya illinoinensis HOM05D018456 ORTHO05D024862 2.5e-12 79.3 1479 22.7
Nitab4.5_0002468g0060 Nicotiana tabacum HOM05D012441 ORTHO05D013726 4.2e-12 78.6 273 32.2
Cc07_g01740 Coffea canephora HOM05D008944 ORTHO05D012260 7.2e-12 77.8 254 34.6
Sabra16G0224300 Salix brachista HOM05D013434 ORTHO05D014659 1.6e-11 76.6 1140 25.1
RcHm_v2.0_Chr2g0172861 Rosa chinensis HOM05D011862 ORTHO05D014222 2.7e-11 75.9 1172 24.4
Sopen02g031170 Solanum pennellii HOM05D012441 ORTHO05D013726 2.7e-11 75.9 236 33.1
PGSC0003DMG400012631 Solanum tuberosum HOM05D012441 ORTHO05D013726 2.7e-11 75.9 237 35.0
QL02p074766 Quercus lobata HOM05D018456 ORTHO05D024862 1.0e-10 73.9 1414 24.6
Potri.001G345300 Populus trichocarpa HOM05D013434 ORTHO05D014659 5.7e-09 68.2 1503 24.2
FAN09G0781 Fragaria x ananassa HOM05D011862 ORTHO05D014222 8.3e-08 64.3 1510 22.4
CAN.G473.9 Capsicum annuum HOM05D012441 ORTHO05D013726 1.1e-07 63.9 237 32.9
Actinidia36113 Actinidia chinensis HOM05D008944 ORTHO05D017205 4.1e-07 62.0 1474 23.1
TAR374G0422 Trochodendron aralioides HOM05D003163 ORTHO05D003504 1.2e-06 60.5 1502 27.0


User provided reference genes

Program Settings