Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib264G0091 Durio zibethinus HOM05D004095 ORTHO05D003197 8.1e-172 607.1 324 100.0
Duzib147G0922 Durio zibethinus HOM05D004095 ORTHO05D003197 1.1e-125 453.8 328 80.8
Duzib187G0006 Durio zibethinus HOM05D004095 ORTHO05D003197 2.2e-121 439.5 328 78.4
Gorai.003G007900 Gossypium raimondii HOM05D004095 ORTHO05D003197 5.9e-114 414.8 328 74.1
COL.COLO4_22466 Corchorus olitorius HOM05D004095 ORTHO05D003197 2.2e-108 396.4 326 67.2
Gohir.D03G007700 Gossypium hirsutum HOM05D004095 ORTHO05D003197 3.2e-104 382.5 328 71.3
Gohir.A02G172400 Gossypium hirsutum HOM05D004095 ORTHO05D003197 1.2e-103 380.6 328 70.7
Gorai.008G131100 Gossypium raimondii HOM05D004095 ORTHO05D003197 7.5e-85 318.2 271 64.2
Atru.chr3.863_Atru.chr3.864 Acer truncatum HOM05D004095 ORTHO05D003197 2.1e-79 300.1 368 54.6
Cfa007004 Carpinus fangiana HOM05D004095 ORTHO05D003197 2.2e-76 290.0 328 58.5
Haze_03728 Corylus avellana HOM05D004095 ORTHO05D003197 5.8e-61 238.8 427 43.8
Eucgr.I02328 Eucalyptus grandis HOM05D004095 ORTHO05D003197 2.3e-57 226.9 327 47.4
Gorai.008G208400 Gossypium raimondii HOM05D004095 ORTHO05D003197 2.3e-57 226.9 171 67.8
Gohir.D12G193466 Gossypium hirsutum HOM05D004095 ORTHO05D003197 2.5e-56 223.4 212 57.1
TAR376G0784 Trochodendron aralioides HOM05D004095 ORTHO05D003197 1.8e-54 217.2 335 47.8
Ciclev10025767m.g Citrus clementina HOM05D004095 ORTHO05D003197 4.0e-54 216.1 336 42.6
Prupe.7G171900 Prunus persica HOM05D004095 ORTHO05D003197 1.3e-52 211.1 406 40.1
THA.LOC104807504 Tarenaya hassleriana HOM05D004095 ORTHO05D003197 3.0e-49 199.9 351 44.4
THA.LOC104804274 Tarenaya hassleriana HOM05D004095 ORTHO05D003197 5.3e-46 189.1 356 43.8
TAR381G0731 Trochodendron aralioides HOM05D004095 ORTHO05D003197 3.8e-44 183.0 349 40.1
CARHR244340 Cardamine hirsuta HOM05D004095 ORTHO05D003197 1.1e-43 181.4 348 43.7
Nn6g31993 Nelumbo nucifera HOM05D004095 ORTHO05D003197 1.0e-41 174.9 341 42.8
Dinv31870 Davidia involucrata HOM05D004095 ORTHO05D003197 7.4e-40 168.7 338 46.2
GSVIVG01018727001 Vitis vinifera HOM05D004095 ORTHO05D003197 2.1e-39 167.2 182 65.4
TAR628G1526 Trochodendron aralioides HOM05D004095 ORTHO05D003197 1.0e-36 158.3 382 38.7
A03p63990 Brassica napus HOM05D004095 ORTHO05D003197 7.1e-35 152.1 378 38.6
PSO675G0587 Papaver somniferum HOM05D004095 ORTHO05D003197 4.6e-34 149.4 350 38.9
BraA03t15466Z Brassica rapa HOM05D004095 ORTHO05D003197 1.8e-33 147.5 381 37.3
CiPaw.07G146700 Carya illinoinensis HOM05D004095 ORTHO05D003197 6.7e-33 145.6 330 38.5
BcaNung05051 Brassica carinata HOM05D004095 ORTHO05D003197 1.5e-32 144.4 366 37.2
Carub.0007s0428 Capsella rubella HOM05D004095 ORTHO05D003197 3.3e-32 143.3 357 40.3
CSS0006390 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 4.3e-32 142.9 335 39.1
CSS0032179 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 5.7e-32 142.5 335 38.5
C01p03060 Brassica napus HOM05D004095 ORTHO05D003197 1.6e-31 141.0 345 39.7
TWI12G1115 Tripterygium wilfordii HOM05D004095 ORTHO05D003197 8.2e-31 138.7 335 38.2
FAN19G1292 Fragaria x ananassa HOM05D024588 ORTHO05D003197 1.8e-30 137.5 170 59.4
AL7G15100 Arabidopsis lyrata HOM05D004095 ORTHO05D003197 1.3e-28 131.3 366 37.7
Aqoxy5G01820 Aquilegia oxysepala HOM05D004095 ORTHO05D003197 2.2e-28 130.6 345 38.6
PSO541G2818 Papaver somniferum HOM05D004095 ORTHO05D003197 2.2e-28 130.6 351 36.2
PSO700G0117 Papaver somniferum HOM05D004095 ORTHO05D003197 2.2e-28 130.6 354 37.0
Nn5g30782 Nelumbo nucifera HOM05D004095 ORTHO05D003197 2.9e-28 130.2 335 40.0
AT4G35940 Arabidopsis thaliana HOM05D004095 ORTHO05D003197 6.5e-28 129.0 389 37.8
PGR119G1825 Punica granatum HOM05D004095 ORTHO05D003197 6.5e-28 129.0 215 48.4
Haze_22667 Corylus avellana HOM05D004095 ORTHO05D003197 1.4e-27 127.9 332 40.4
Sp7g33720 Schrenkiella parvula HOM05D004095 ORTHO05D003197 2.5e-27 127.1 373 38.1
MSTRG.25264 Avicennia marina HOM05D004095 ORTHO05D003197 3.2e-27 126.7 362 38.1
CAN.G311.49 Capsicum annuum HOM05D004095 ORTHO05D003197 3.2e-27 126.7 335 37.0
BcaNung00778 Brassica carinata HOM05D004095 ORTHO05D003197 4.2e-27 126.3 346 41.0
Cc10_g01420 Coffea canephora HOM05D004095 ORTHO05D003197 7.1e-27 125.6 353 37.4
Oeu061977.1 Olea europaea HOM05D004095 ORTHO05D003197 9.3e-27 125.2 358 36.9
PSO170G2543 Papaver somniferum HOM05D004095 ORTHO05D003197 3.5e-26 123.2 354 35.9
Aa31LG6G12890 Aethionema arabicum HOM05D004095 ORTHO05D003197 6.1e-26 122.5 366 39.9
C07p61450 Brassica napus HOM05D004095 ORTHO05D003197 1.3e-25 121.3 366 34.7
BolC1t00292H Brassica oleracea HOM05D004095 ORTHO05D003197 3.0e-25 120.2 340 36.5
BolC7t46570H Brassica oleracea HOM05D004095 ORTHO05D003197 3.0e-25 120.2 381 36.0
Potri.002G019200 Populus trichocarpa HOM05D004095 ORTHO05D003197 5.1e-25 119.4 332 33.7
MD02G1126500 Malus domestica HOM05D004095 ORTHO05D003197 8.7e-25 118.6 388 28.9
PGSC0003DMG400009946 Solanum tuberosum HOM05D004095 ORTHO05D003197 8.7e-25 118.6 346 35.8
Solyc04g081730.3 Solanum lycopersicum HOM05D004095 ORTHO05D003197 1.1e-24 118.2 342 35.7
Lj4A21T58 Lonicera japonica HOM05D004095 ORTHO05D003197 1.9e-24 117.5 366 37.7
BraA01t00262Z Brassica rapa HOM05D004095 ORTHO05D003197 4.3e-24 116.3 361 36.8
TWI36G1615 Tripterygium wilfordii HOM05D004095 ORTHO05D003197 4.3e-24 116.3 265 34.0
A01p02760 Brassica napus HOM05D004095 ORTHO05D003197 7.4e-24 115.5 342 38.3
AT2G17787 Arabidopsis thaliana HOM05D004095 ORTHO05D003197 9.7e-24 115.2 357 32.2
MSTRG.1174 Avicennia marina HOM05D004095 ORTHO05D003197 9.7e-24 115.2 349 37.2
Manes.18G010907 Manihot esculenta HOM05D004095 ORTHO05D003197 9.7e-24 115.2 343 32.1
CiPaw.08G067700 Carya illinoinensis HOM05D004095 ORTHO05D003197 1.3e-23 114.8 327 37.0
Sopen04g035350 Solanum pennellii HOM05D004095 ORTHO05D003197 2.2e-23 114.0 341 35.5
BcaB07g31703 Brassica carinata HOM05D004095 ORTHO05D003197 2.8e-23 113.6 334 32.3
CSS0036757 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 1.1e-22 111.7 301 34.9
Oeu026642.1 Olea europaea HOM05D004095 ORTHO05D003197 1.1e-22 111.7 402 30.6
QL11p050200 Quercus lobata HOM05D004095 ORTHO05D003197 1.1e-22 111.7 333 35.4
BraA09t36805Z Brassica rapa HOM05D004095 ORTHO05D003197 1.4e-22 111.3 333 35.1
BraA07t28113Z Brassica rapa HOM05D004095 ORTHO05D003197 5.3e-22 109.4 342 32.7
Duzib041G0318 Durio zibethinus HOM05D004095 ORTHO05D003197 6.9e-22 109.0 326 32.2
SalBow7G2790 Salvia bowleyana HOM05D004095 ORTHO05D003197 2.0e-21 107.5 400 35.5
vmacro07570 Vaccinium macrocarpon HOM05D004095 ORTHO05D003197 2.0e-21 107.5 385 35.8
Peaxi162Scf00860g00422 Petunia axillaris HOM05D004095 ORTHO05D003197 2.6e-21 107.1 333 35.7
Migut.C00862 Erythranthe guttata HOM05D004095 ORTHO05D003197 4.5e-21 106.3 374 35.6
FvH4_1g11400 Fragaria vesca HOM05D024588 ORTHO05D003197 5.9e-21 105.9 170 52.4
RcHm_v2.0_Chr2g0098961 Rosa chinensis HOM05D024588 ORTHO05D003197 1.0e-20 105.1 171 53.2
CARHR108180 Cardamine hirsuta HOM05D004095 ORTHO05D003197 2.2e-20 104.0 325 33.5
C09p13630 Brassica napus HOM05D004095 ORTHO05D003197 2.9e-20 103.6 331 35.0
Duzib093G1456 Durio zibethinus HOM05D004095 ORTHO05D003197 3.8e-20 103.2 332 31.3
Potri.005G242400 Populus trichocarpa HOM05D004095 ORTHO05D003197 3.8e-20 103.2 342 31.3
Carub.0003s3193 Capsella rubella HOM05D004095 ORTHO05D003197 5.0e-20 102.8 364 31.3
AL3G50810 Arabidopsis lyrata HOM05D004095 ORTHO05D003197 6.5e-20 102.4 356 34.8
A07p03170 Brassica napus HOM05D004095 ORTHO05D003197 6.5e-20 102.4 347 32.0
SGA_v2.0_scaffold11G05941 Striga asiatica HOM05D004095 ORTHO05D003197 1.1e-19 101.7 335 32.8
A09p11580 Brassica napus HOM05D004095 ORTHO05D003197 1.4e-19 101.3 332 28.9
MELO3C011353.2 Cucumis melo HOM05D004095 ORTHO05D003197 1.4e-19 101.3 345 31.9
Thhalv10027062m.g Eutrema salsugineum HOM05D004095 ORTHO05D003197 1.4e-19 101.3 302 33.4
BcaC06g36322 Brassica carinata HOM05D004095 ORTHO05D003197 1.9e-19 100.9 336 33.0
Sabra05G0187500 Salix brachista HOM05D004095 ORTHO05D003197 2.5e-19 100.5 336 28.9
Cfa013982 Carpinus fangiana HOM05D004095 ORTHO05D003197 4.2e-19 99.8 326 34.7
AUR62040566 Chenopodium quinoa HOM05D004095 ORTHO05D003197 7.2e-19 99.0 360 31.1
Sc15g0004790 Simmondsia chinensis HOM05D004095 ORTHO05D003197 7.2e-19 99.0 368 37.0
ClCG08G014140 Citrullus lanatus HOM05D004095 ORTHO05D003197 9.4e-19 98.6 339 35.4
Oeu007365.1 Olea europaea HOM05D004095 ORTHO05D003197 9.4e-19 98.6 252 37.3
Thhalv10022767m.g Eutrema salsugineum HOM05D004095 ORTHO05D003197 1.6e-18 97.8 372 33.3
Hma1.2p1_0023F.1_g015650 Hydrangea macrophylla HOM05D004095 ORTHO05D003197 2.1e-18 97.4 239 33.5
Lj4A799T84 Lonicera japonica HOM05D004095 ORTHO05D003197 2.7e-18 97.1 327 33.3
Actinidia15439 Actinidia chinensis HOM05D004095 ORTHO05D003197 3.6e-18 96.7 181 52.5
Actinidia17001 Actinidia chinensis HOM05D004095 ORTHO05D003197 4.6e-18 96.3 276 37.7
CsaV3_2G024280 Cucumis sativus L. HOM05D004095 ORTHO05D003197 4.6e-18 96.3 351 36.2
BcaC04g22942 Brassica carinata HOM05D004095 ORTHO05D003197 6.1e-18 95.9 330 29.4
MSTRG.22345 Avicennia marina HOM05D004095 ORTHO05D003197 1.4e-17 94.7 336 36.0
CAN.G1517.6 Capsicum annuum HOM05D004095 ORTHO05D003197 2.3e-17 94.0 340 34.7
Nitab4.5_0006505g0050 Nicotiana tabacum HOM05D004095 ORTHO05D003197 3.0e-17 93.6 377 34.7
Sabra02G0015500 Salix brachista HOM05D004095 ORTHO05D003197 3.0e-17 93.6 241 33.2
SGA_v2.0_scaffold19G08554 Striga asiatica HOM05D004095 ORTHO05D003197 3.0e-17 93.6 344 32.0
Ciclev10002009m.g Citrus clementina HOM05D004095 ORTHO05D003197 1.5e-16 91.3 330 33.9
AUR62041467 Chenopodium quinoa HOM05D004095 ORTHO05D003197 2.0e-16 90.9 397 34.0
DCAR_009498 Daucus carota HOM05D004095 ORTHO05D003197 2.5e-16 90.5 384 32.8
Thecc.02G059700 Theobroma cacao HOM05D015147 ORTHO05D003197 2.5e-16 90.5 433 26.8
GSVIVG01024025001 Vitis vinifera HOM05D004095 ORTHO05D003197 5.7e-16 89.4 346 33.2
Lalb_Chr08g0246191 Lupinus albus HOM05D004095 ORTHO05D003197 7.4e-16 89.0 336 35.4
BolC7t40940H Brassica oleracea HOM05D004095 ORTHO05D003197 9.7e-16 88.6 353 29.2
Sed0007913 Sechium edule HOM05D004095 ORTHO05D003197 1.3e-15 88.2 349 29.5
Hund01666 Selenicereus undatus HOM05D004095 ORTHO05D003197 1.3e-15 88.2 369 32.0
SHI08550 Sapria himalayana HOM05D003189 ORTHO05D003449 1.7e-15 87.8 284 32.4
arahy.Tifrunner.gnm1.ann1.I59WU7 Arachis hypogaea HOM05D004095 ORTHO05D003197 2.2e-15 87.4 342 33.9
C07p05400 Brassica napus HOM05D004095 ORTHO05D003197 2.2e-15 87.4 352 28.7
Aqoxy6G02168 Aquilegia oxysepala HOM05D004095 ORTHO05D003197 3.7e-15 86.7 335 34.9
Thecc.08G047900 Theobroma cacao HOM05D004095 ORTHO05D003197 3.7e-15 86.7 329 30.7
Potri.009G134800 Populus trichocarpa HOM05D015147 ORTHO05D003197 4.8e-15 86.3 334 31.4
QL02p012206 Quercus lobata HOM05D004095 ORTHO05D003197 6.3e-15 85.9 370 26.2
unitig_749.g13901 Utricularia gibba HOM05D004095 ORTHO05D003197 8.2e-15 85.5 344 31.4
Sed0017695 Sechium edule HOM05D004095 ORTHO05D003197 1.1e-14 85.1 329 30.1
COL.COLO4_26117 Corchorus olitorius HOM05D004095 ORTHO05D003197 2.4e-14 84.0 233 30.0
Lj5g0025072 Lotus japonicus HOM05D004095 ORTHO05D003197 3.1e-14 83.6 334 32.0
MBI05_g23379_MAGBIO Magnolia biondii HOM05D004095 ORTHO05D003197 3.1e-14 83.6 179 45.8
Peaxi162Scf00064g00737 Petunia axillaris HOM05D004095 ORTHO05D003197 6.9e-14 82.4 319 32.9
Gohir.A01G110100 Gossypium hirsutum HOM05D004095 ORTHO05D003197 9.1e-14 82.0 328 31.1
PGR031G2559 Punica granatum HOM05D004095 ORTHO05D003197 9.1e-14 82.0 332 33.1
arahy.Tifrunner.gnm1.ann1.VNIF6J Arachis hypogaea HOM05D004095 ORTHO05D003197 1.2e-13 81.6 345 31.3
Gohir.D01G096700 Gossypium hirsutum HOM05D004095 ORTHO05D003197 1.5e-13 81.3 328 31.1
PGSC0003DMG400029333 Solanum tuberosum HOM05D004095 ORTHO05D003197 2.0e-13 80.9 343 32.1
Gorai.009G193100 Gossypium raimondii HOM05D004095 ORTHO05D003197 2.6e-13 80.5 331 31.4
Cfa005239 Carpinus fangiana HOM05D004095 ORTHO05D003197 4.5e-13 79.7 329 28.0
Dinv39538 Davidia involucrata HOM05D004095 ORTHO05D003197 7.7e-13 79.0 139 56.8
Gorai.002G122400 Gossypium raimondii HOM05D004095 ORTHO05D003197 7.7e-13 79.0 226 32.3
Lsat_1_v5_gn_8_29800 Lactuca sativa HOM05D004095 ORTHO05D003197 1.3e-12 78.2 176 41.5
FAN23G2095 Fragaria x ananassa HOM05D024588 ORTHO05D003197 1.7e-12 77.8 95 52.6
Gohir.A05G185000 Gossypium hirsutum HOM05D004095 ORTHO05D003197 2.9e-12 77.0 331 25.4
MD15G1242200 Malus domestica HOM05D024588 ORTHO05D003197 2.9e-12 77.0 66 63.6
EL10Ac3g06641 Beta vulgaris HOM05D004095 ORTHO05D003197 3.8e-12 76.6 400 27.8
Gohir.D05G187800 Gossypium hirsutum HOM05D004095 ORTHO05D003197 3.8e-12 76.6 331 30.8
Haze_02143 Corylus avellana HOM05D015147 ORTHO05D003197 5.0e-12 76.3 346 30.1
TAR625G0988 Trochodendron aralioides HOM05D004095 ORTHO05D003197 4.2e-11 73.2 217 30.9
Aa31LG7G4540 Aethionema arabicum HOM05D008819 ORTHO05D003197 5.5e-11 72.8 340 25.6
Eucgr.H00956 Eucalyptus grandis HOM05D066110 ORTHO05D003197 9.4e-11 72.0 358 33.0
Prupe.1G362500 Prunus persica HOM05D004095 ORTHO05D003197 1.2e-10 71.6 333 25.2
Aa31LG4G6060 Aethionema arabicum HOM05D008819 ORTHO05D003197 4.7e-10 69.7 253 32.0
HanXRQChr12g0366821 Helianthus annuus HOM05D004095 ORTHO05D003197 6.1e-10 69.3 390 30.0
Actinidia03180 Actinidia chinensis HOM05D004095 ORTHO05D003197 1.0e-09 68.6 210 33.8
Cpa.g.sc26.299 Carica papaya HOM05D004095 ORTHO05D003197 1.8e-09 67.8 320 25.3
Migut.O00908 Erythranthe guttata HOM05D004095 ORTHO05D003197 1.8e-09 67.8 326 26.4
FvH4_2g38160 Fragaria vesca HOM05D004095 ORTHO05D003197 1.8e-09 67.8 336 30.7
Prupe.1G362800 Prunus persica HOM05D004095 ORTHO05D003197 2.3e-09 67.4 270 27.0
Thhalv10008464m.g Eutrema salsugineum HOM05D008819 ORTHO05D003197 3.0e-09 67.0 330 28.2
CARHR069410 Cardamine hirsuta HOM05D008819 ORTHO05D003197 1.1e-08 65.1 280 28.6
Migut.N03174 Erythranthe guttata HOM05D004095 ORTHO05D003197 1.1e-08 65.1 326 25.8
FAN15G2156 Fragaria x ananassa HOM05D004095 ORTHO05D003197 1.5e-08 64.7 331 26.3
A07p41430 Brassica napus HOM05D008819 ORTHO05D003197 3.3e-08 63.5 244 27.9
Medtr1g034990 Medicago truncatula HOM05D013708 ORTHO05D003197 3.3e-08 63.5 335 33.1
FAN20G0678 Fragaria x ananassa HOM05D004095 ORTHO05D003197 4.4e-08 63.2 338 29.9
THA.LOC104813782 Tarenaya hassleriana HOM05D008819 ORTHO05D003197 5.7e-08 62.8 333 25.8
AL2G35870 Arabidopsis lyrata HOM05D008819 ORTHO05D003197 9.7e-08 62.0 250 28.4
HPP92_007327 Vanilla planifolia HOM05D004095 ORTHO05D003197 1.3e-07 61.6 336 24.7
BcaNung03339 Brassica carinata HOM05D008819 ORTHO05D003197 2.8e-07 60.5 246 30.1
HanXRQChr13g0387151 Helianthus annuus HOM05D004095 ORTHO05D003197 2.8e-07 60.5 169 38.5
Lj1g0024400 Lotus japonicus HOM05D004095 ORTHO05D003197 2.8e-07 60.5 324 27.8
BolC7t42868H Brassica oleracea HOM05D008819 ORTHO05D003197 8.2e-07 58.9 246 30.5
Cpa.g.sc26.300 Carica papaya HOM05D004095 ORTHO05D003197 1.1e-06 58.5 94 42.6
FAN27G1813 Fragaria x ananassa HOM05D004095 ORTHO05D003197 1.1e-06 58.5 337 29.4
Duzib052G0919 Durio zibethinus HOM05D015147 ORTHO05D003197 1.8e-06 57.8 113 31.0
unitig_747.g21527 Utricularia gibba HOM05D002344 ORTHO05D002954 2.4e-06 57.4 205 33.7
VMungo0647G0628 Vigna mungo HOM05D013708 ORTHO05D003197 2.4e-06 57.4 259 35.5
Carub.0001s1963 Capsella rubella HOM05D008819 ORTHO05D003197 3.1e-06 57.0 250 28.4
Thhalv10019693m.g Eutrema salsugineum HOM05D008819 ORTHO05D003197 3.1e-06 57.0 278 27.3
MD15G1242000 Malus domestica HOM05D004095 ORTHO05D003197 3.1e-06 57.0 27 88.9
BcaC08g47079 Brassica carinata HOM05D008819 ORTHO05D003197 4.1e-06 56.6 244 29.5
Potri.005G242300 Populus trichocarpa HOM05D004095 ORTHO05D003197 9.1e-06 55.5 329 24.0


User provided reference genes

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