Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib264G0014 Durio zibethinus HOM05D004438 ORTHO05D005256 5.0e-54 214.2 105 100.0
Gohir.A11G197600 Gossypium hirsutum HOM05D004438 ORTHO05D005256 2.3e-51 205.3 101 98.0
Duzib187G1770 Durio zibethinus HOM05D004438 ORTHO05D005256 3.0e-51 204.9 101 98.0
Gohir.D11G231900 Gossypium hirsutum HOM05D004438 ORTHO05D005256 3.0e-51 204.9 101 98.0
Gorai.007G245000 Gossypium raimondii HOM05D004438 ORTHO05D005256 3.0e-51 204.9 101 98.0
Cpa.g.sc21.8 Carica papaya HOM05D004438 ORTHO05D005256 1.5e-50 202.6 101 97.0
QL06p031963 Quercus lobata HOM05D004438 ORTHO05D005256 9.7e-50 199.9 101 94.1
COL.COLO4_11000 Corchorus olitorius HOM05D004438 ORTHO05D005256 1.6e-49 199.1 101 94.1
Rhsim10G0149000 Rhododendron simsii HOM05D004438 ORTHO05D005256 2.2e-49 198.7 101 94.1
Thecc.01G114400 Theobroma cacao HOM05D004438 ORTHO05D005256 2.8e-49 198.4 101 96.0
TWI53G0984 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 2.8e-49 198.4 101 94.1
Gohir.A11G053800 Gossypium hirsutum HOM05D004438 ORTHO05D005256 3.7e-49 198.0 101 93.1
Solyc04g051710.2 Solanum lycopersicum HOM05D004438 ORTHO05D005256 3.7e-49 198.0 101 91.1
Sopen04g023090 Solanum pennellii HOM05D004438 ORTHO05D005256 3.7e-49 198.0 101 91.1
CiPaw.03G133700 Carya illinoinensis HOM05D004438 ORTHO05D005256 4.8e-49 197.6 101 92.1
Haze_25054 Corylus avellana HOM05D004438 ORTHO05D005256 4.8e-49 197.6 101 92.1
Nitab4.5_0000184g0290 Nicotiana tabacum HOM05D004438 ORTHO05D005256 6.3e-49 197.2 101 91.1
Nitab4.5_0004977g0040 Nicotiana tabacum HOM05D004438 ORTHO05D005256 6.3e-49 197.2 101 91.1
Cfa002762 Carpinus fangiana HOM05D004438 ORTHO05D005256 8.2e-49 196.8 101 92.1
PGSC0003DMG400031197 Solanum tuberosum HOM05D004438 ORTHO05D005256 8.2e-49 196.8 101 90.1
Gohir.A10G084200 Gossypium hirsutum HOM05D004438 ORTHO05D005256 1.1e-48 196.4 101 92.1
Gorai.011G114100 Gossypium raimondii HOM05D004438 ORTHO05D005256 1.4e-48 196.1 101 91.1
PSO541G1989 Papaver somniferum HOM05D004438 ORTHO05D005256 1.4e-48 196.1 101 91.1
TWI74G1039 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 1.4e-48 196.1 101 93.1
Actinidia06107 Actinidia chinensis HOM05D004438 ORTHO05D005256 1.8e-48 195.7 101 91.1
Gohir.D11G057300 Gossypium hirsutum HOM05D004438 ORTHO05D005256 1.8e-48 195.7 101 91.1
QL01p009111 Quercus lobata HOM05D004438 ORTHO05D005256 2.4e-48 195.3 101 93.1
AL8G42290 Arabidopsis lyrata HOM05D004438 ORTHO05D005256 3.1e-48 194.9 101 90.1
AT5G64816 Arabidopsis thaliana HOM05D004438 ORTHO05D005256 3.1e-48 194.9 101 90.1
Oeu027202.1 Olea europaea HOM05D004438 ORTHO05D005256 3.1e-48 194.9 101 92.1
Gohir.D10G104600 Gossypium hirsutum HOM05D004438 ORTHO05D005256 4.1e-48 194.5 101 90.1
Phvul.L002244 Phaseolus vulgaris HOM05D004438 ORTHO05D005256 5.3e-48 194.1 101 88.1
SGA_v2.0_scaffold79G25619 Striga asiatica HOM05D004438 ORTHO05D005256 5.3e-48 194.1 101 90.1
VMungo0720G0202 Vigna mungo HOM05D004438 ORTHO05D005256 5.3e-48 194.1 101 88.1
Peaxi162Scf00106g00162 Petunia axillaris HOM05D004438 ORTHO05D005256 6.9e-48 193.7 101 88.1
Dinv42684 Davidia involucrata HOM05D004438 ORTHO05D005256 9.0e-48 193.4 101 90.1
PSO675G7198 Papaver somniferum HOM05D004438 ORTHO05D005256 1.2e-47 193.0 101 90.1
ClCG01G016040 Citrullus lanatus HOM05D004438 ORTHO05D005256 1.5e-47 192.6 101 87.1
CsaV3_6G042320 Cucumis sativus L. HOM05D004438 ORTHO05D005256 1.5e-47 192.6 101 87.1
MD03G1238400 Malus domestica HOM05D004438 ORTHO05D005256 1.5e-47 192.6 101 92.1
EL10Ac6g13106 Beta vulgaris HOM05D004438 ORTHO05D005256 2.6e-47 191.8 100 90.0
Dinv19477 Davidia involucrata HOM05D004438 ORTHO05D005256 2.6e-47 191.8 100 91.0
TAR625G0091 Trochodendron aralioides HOM05D004438 ORTHO05D005256 2.6e-47 191.8 101 89.1
CSS0020413 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 3.4e-47 191.4 101 88.1
Carub.0008s2564 Capsella rubella HOM05D004438 ORTHO05D005256 3.4e-47 191.4 101 88.1
CARHR278820 Cardamine hirsuta HOM05D004438 ORTHO05D005256 3.4e-47 191.4 101 89.1
AUR62027160 Chenopodium quinoa HOM05D004438 ORTHO05D005256 3.4e-47 191.4 100 91.0
AUR62044399 Chenopodium quinoa HOM05D004438 ORTHO05D005256 3.4e-47 191.4 100 91.0
MBI11_g03707_MAGBIO Magnolia biondii HOM05D004438 ORTHO05D005256 3.4e-47 191.4 101 87.1
CANSAT01G2942 Cannabis sativa HOM05D004438 ORTHO05D005256 4.5e-47 191.0 101 91.1
Sed0014495 Sechium edule HOM05D004438 ORTHO05D005256 4.5e-47 191.0 101 87.1
THA.LOC104799304 Tarenaya hassleriana HOM05D004438 ORTHO05D005256 4.5e-47 191.0 101 89.1
TAR381G0625 Trochodendron aralioides HOM05D004438 ORTHO05D005256 4.5e-47 191.0 101 90.1
Lalb_Chr02g0150651 Lupinus albus HOM05D004438 ORTHO05D005256 5.9e-47 190.7 101 87.1
MSTRG.9937 Avicennia marina HOM05D004438 ORTHO05D005256 7.7e-47 190.3 101 87.1
Manes.02G145100 Manihot esculenta HOM05D004438 ORTHO05D005256 1.0e-46 189.9 101 91.1
Sc03g0004400 Simmondsia chinensis HOM05D004438 ORTHO05D005256 1.3e-46 189.5 100 87.0
Sed0003177 Sechium edule HOM05D004438 ORTHO05D005256 1.7e-46 189.1 101 86.1
Ah.02g126620 Amaranthus hybridus HOM05D004438 ORTHO05D005256 2.2e-46 188.7 100 89.0
Cc10_g15830 Coffea canephora HOM05D004438 ORTHO05D005256 2.2e-46 188.7 101 88.1
Medtr1g073620 Medicago truncatula HOM05D004438 ORTHO05D005256 2.9e-46 188.3 101 85.1
RcHm_v2.0_Chr2g0117091 Rosa chinensis HOM05D004438 ORTHO05D005256 2.9e-46 188.3 101 90.1
Ah.03g137490 Amaranthus hybridus HOM05D004438 ORTHO05D005256 3.8e-46 188.0 100 88.0
Lalb_Chr21g0312471 Lupinus albus HOM05D004438 ORTHO05D005256 3.8e-46 188.0 101 87.1
MD15G1340400 Malus domestica HOM05D004438 ORTHO05D005256 3.8e-46 188.0 101 90.1
MELO3C007474.2 Cucumis melo HOM05D004438 ORTHO05D005256 5.0e-46 187.6 101 86.1
Thhalv10005124m.g Eutrema salsugineum HOM05D004438 ORTHO05D005256 5.0e-46 187.6 101 87.1
SalBow3G3218 Salvia bowleyana HOM05D004438 ORTHO05D005256 6.5e-46 187.2 101 85.1
FvH4_1g22770 Fragaria vesca HOM05D004438 ORTHO05D005256 8.5e-46 186.8 101 89.1
FAN19G1036 Fragaria x ananassa HOM05D004438 ORTHO05D005256 8.5e-46 186.8 101 89.1
FAN23G1009 Fragaria x ananassa HOM05D004438 ORTHO05D005256 8.5e-46 186.8 101 89.1
FAN26G1829 Fragaria x ananassa HOM05D004438 ORTHO05D005256 8.5e-46 186.8 101 89.1
FAN28G0942 Fragaria x ananassa HOM05D004438 ORTHO05D005256 8.5e-46 186.8 101 89.1
Prupe.4G171500 Prunus persica HOM05D004438 ORTHO05D005256 8.5e-46 186.8 101 90.1
BcaB02g09832 Brassica carinata HOM05D004438 ORTHO05D005256 1.1e-45 186.4 101 87.1
BcaC01g02715 Brassica carinata HOM05D004438 ORTHO05D005256 1.1e-45 186.4 101 87.1
A06p31610 Brassica napus HOM05D004438 ORTHO05D005256 1.1e-45 186.4 101 87.1
C03p61350 Brassica napus HOM05D004438 ORTHO05D005256 1.1e-45 186.4 101 87.1
BolC3t18395H Brassica oleracea HOM05D004438 ORTHO05D005256 1.1e-45 186.4 101 87.1
BraA06t26098Z Brassica rapa HOM05D004438 ORTHO05D005256 1.1e-45 186.4 101 87.1
CAN.G344.10 Capsicum annuum HOM05D004438 ORTHO05D005256 1.1e-45 186.4 101 85.1
Glyma.01G200000 Glycine max HOM05D004438 ORTHO05D005256 1.1e-45 186.4 101 84.2
Sp2g27890 Schrenkiella parvula HOM05D004438 ORTHO05D005256 1.1e-45 186.4 101 87.1
Nitab4.5_0003709g0100 Nicotiana tabacum HOM05D004438 ORTHO05D005256 1.4e-45 186.0 101 86.1
Prupe.6G170300 Prunus persica HOM05D004438 ORTHO05D005256 1.4e-45 186.0 101 88.1
Lj5g0016992 Lotus japonicus HOM05D004438 ORTHO05D005256 1.9e-45 185.7 101 85.1
Os03g0185600 Oryza sativa ssp. japonica HOM05D004438 ORTHO05D005256 1.9e-45 185.7 101 85.1
Potri.002G105400 Populus trichocarpa HOM05D004438 ORTHO05D005256 1.9e-45 185.7 101 88.1
Potri.005G156400 Populus trichocarpa HOM05D004438 ORTHO05D005256 1.9e-45 185.7 101 88.1
vmacro18638 Vaccinium macrocarpon HOM05D004438 ORTHO05D005256 1.9e-45 185.7 101 87.1
Glyma.10G190000 Glycine max HOM05D004438 ORTHO05D005256 2.5e-45 185.3 101 84.2
SGA_v2.0_scaffold308G48110 Striga asiatica HOM05D004438 ORTHO05D005256 2.5e-45 185.3 101 85.1
DCAR_009568 Daucus carota HOM05D004438 ORTHO05D005256 3.2e-45 184.9 101 85.1
Aqoxy2G01099 Aquilegia oxysepala HOM05D004438 ORTHO05D005256 4.2e-45 184.5 101 86.1
MD15G1331400 Malus domestica HOM05D004438 ORTHO05D005256 4.2e-45 184.5 101 89.1
Nitab4.5_0000131g0360 Nicotiana tabacum HOM05D004438 ORTHO05D005256 4.2e-45 184.5 101 84.2
Peaxi162Scf00979g00008 Petunia axillaris HOM05D004438 ORTHO05D005256 4.2e-45 184.5 101 85.1
Oeu028520.2 Olea europaea HOM05D004438 ORTHO05D005256 5.5e-45 184.1 102 89.2
Sabra02G0082700 Salix brachista HOM05D004438 ORTHO05D005256 5.5e-45 184.1 101 87.1
THA.LOC104819312 Tarenaya hassleriana HOM05D004438 ORTHO05D005256 7.2e-45 183.7 101 86.1
Lsat_1_v5_gn_8_150501 Lactuca sativa HOM05D004438 ORTHO05D005256 9.4e-45 183.3 101 87.1
TPR.G28848 Trifolium pratense HOM05D004438 ORTHO05D005256 9.4e-45 183.3 101 83.2
Sabra05G0119900 Salix brachista HOM05D004438 ORTHO05D005256 1.2e-44 183.0 101 87.1
Atru.chr13.1020 Acer truncatum HOM05D004438 ORTHO05D005256 1.6e-44 182.6 101 86.1
Psat6g129880 Pisum sativum HOM05D004438 ORTHO05D005256 1.6e-44 182.6 101 83.2
Ciclev10002841m.g Citrus clementina HOM05D004438 ORTHO05D005256 2.1e-44 182.2 101 86.1
DCAR_009565 Daucus carota HOM05D004438 ORTHO05D005256 2.1e-44 182.2 101 84.2
Migut.N00230 Erythranthe guttata HOM05D004438 ORTHO05D005256 2.7e-44 181.8 101 84.2
Zm00001eb006400 Zea mays HOM05D004438 ORTHO05D005256 2.7e-44 181.8 101 83.2
CDE02G2078 Ceratophyllum demersum HOM05D004438 ORTHO05D005256 3.6e-44 181.4 101 85.1
Eucgr.F02140 Eucalyptus grandis HOM05D004438 ORTHO05D005256 6.1e-44 180.6 101 81.2
Glyma.20G200800 Glycine max HOM05D004438 ORTHO05D005256 6.1e-44 180.6 101 79.2
TAR625G0287 Trochodendron aralioides HOM05D004438 ORTHO05D005256 6.1e-44 180.6 101 82.2
ECA233G2293 Erigeron canadensis HOM05D004438 ORTHO05D005256 7.9e-44 180.3 101 86.1
Zm00001eb401580 Zea mays HOM05D004438 ORTHO05D005256 1.0e-43 179.9 101 82.2
CAN.G475.35 Capsicum annuum HOM05D004438 ORTHO05D005256 1.8e-43 179.1 101 84.2
HanXRQChr12g0372061 Helianthus annuus HOM05D004438 ORTHO05D005256 1.8e-43 179.1 101 84.2
RcHm_v2.0_Chr5g0031621 Rosa chinensis HOM05D000965 ORTHO05D000842 1.8e-43 179.1 101 84.2
Sopen00g011470 Solanum pennellii HOM05D004438 ORTHO05D005256 2.3e-43 178.7 101 82.2
Solyc04g076260.2 Solanum lycopersicum HOM05D004438 ORTHO05D005256 3.0e-43 178.3 101 83.2
Nn5g29898 Nelumbo nucifera HOM05D004438 ORTHO05D005256 6.7e-43 177.2 101 83.2
GSVIVG01009169001 Vitis vinifera HOM05D004438 ORTHO05D005256 8.8e-43 176.8 101 82.2
unitig_699.g19132 Utricularia gibba HOM05D004438 ORTHO05D005256 1.5e-42 176.0 100 81.0
CSS0036861 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 2.5e-42 175.3 98 84.7
Aa31LG1G17110 Aethionema arabicum HOM05D004438 ORTHO05D005256 3.3e-42 174.9 101 81.2
FvH4_3g18771 Fragaria vesca HOM05D004438 ORTHO05D005256 3.3e-42 174.9 101 84.2
Manes.10G131700 Manihot esculenta HOM05D004438 ORTHO05D005256 4.3e-42 174.5 101 83.2
Psat7g208520 Pisum sativum HOM05D004438 ORTHO05D005256 4.3e-42 174.5 101 80.2
HPP92_015825 Vanilla planifolia HOM05D004438 ORTHO05D005256 4.3e-42 174.5 100 81.0
PGSC0003DMG400009364 Solanum tuberosum HOM05D004438 ORTHO05D005256 5.7e-42 174.1 101 81.2
SalBow2G1806 Salvia bowleyana HOM05D004438 ORTHO05D005256 2.2e-41 172.2 102 79.4
Rhsim08G0005900 Rhododendron simsii HOM05D004438 ORTHO05D005256 2.8e-41 171.8 104 78.8
Nn1g08461 Nelumbo nucifera HOM05D004438 ORTHO05D005256 1.4e-40 169.5 90 90.0
Gorai.007G062500 Gossypium raimondii HOM05D004438 ORTHO05D005256 3.1e-40 168.3 101 82.2
Sc23g0000680 Simmondsia chinensis HOM05D004438 ORTHO05D005256 1.0e-38 163.3 101 76.2
ATR1132G028 Amborella trichopoda HOM05D004438 ORTHO05D005256 9.4e-37 156.8 106 74.5
FAN11G0727 Fragaria x ananassa HOM05D000965 ORTHO05D000842 1.0e-35 153.3 85 84.7
FAN21G3234 Fragaria x ananassa HOM05D000965 ORTHO05D000842 1.8e-35 152.5 85 83.5
TWI56G0149 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 1.8e-35 152.5 102 75.5
FAN16G1755 Fragaria x ananassa HOM05D004438 ORTHO05D005256 6.7e-35 150.6 85 84.7
SHI31196 Sapria himalayana HOM05D004438 ORTHO05D005256 3.7e-33 144.8 102 64.7
Migut.G00404 Erythranthe guttata HOM05D004438 ORTHO05D005256 1.1e-32 143.3 109 67.9
Nitab4.5_0004977g0030 Nicotiana tabacum HOM05D004438 ORTHO05D005256 8.5e-30 133.7 64 96.9
Mapoly0031s0095 Marchantia polymorpha HOM05D004438 ORTHO05D005256 1.5e-29 132.9 101 63.4
AagrBONN_evm.TU.Sc2ySwM_117.295 Anthoceros agrestis HOM05D004438 ORTHO05D005256 2.7e-28 128.6 101 62.4
Pp3c22_12110 Physcomitrium patens HOM05D004438 ORTHO05D005256 1.0e-27 126.7 101 59.4
SEGI_36857 Sequoiadendron giganteum HOM05D004438 ORTHO05D005256 1.8e-27 125.9 68 83.8
COL.COLO4_35234 Corchorus olitorius HOM05D004438 ORTHO05D005256 5.7e-26 120.9 109 61.5
CiPaw.04G091100 Carya illinoinensis HOM05D004438 ORTHO05D005256 4.8e-25 117.9 62 91.9
Pp3c19_18370 Physcomitrium patens HOM05D004438 ORTHO05D005256 3.2e-21 105.1 100 50.0
SEGI_35678 Sequoiadendron giganteum HOM05D004438 ORTHO05D005256 3.6e-20 101.7 100 53.0
AagrBONN_evm.TU.Sc2ySwM_344.1988 Anthoceros agrestis HOM05D004438 ORTHO05D005256 8.0e-20 100.5 103 51.5
Gohir.1Z049407 Gossypium hirsutum HOM05D004438 ORTHO05D005256 3.0e-19 98.6 45 100.0
arahy.Tifrunner.gnm1.ann1.7JV24P Arachis hypogaea HOM05D004438 ORTHO05D005256 4.8e-17 91.3 43 93.0
PRCOL_00001176 Prasinoderma coloniale HOM05D004438 ORTHO05D005256 1.3e-14 83.2 62 56.5
CSS0009061 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 1.7e-14 82.8 89 50.6
CSS0034319 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 2.2e-14 82.4 88 51.1
MCO08G336 Micromonas commoda HOM05D004438 ORTHO05D005256 8.5e-14 80.5 86 47.7
Hund21738 Selenicereus undatus HOM05D004438 ORTHO05D005256 9.5e-13 77.0 35 100.0
ATR0049G041 Amborella trichopoda HOM05D004438 ORTHO05D005256 2.1e-12 75.9 100 43.0
Cre07.g313800 Chlamydomonas reinhardtii HOM05D004438 ORTHO05D005256 1.5e-10 69.7 51 58.8
SalBow2G3602 Salvia bowleyana HOM05D004438 ORTHO05D005256 3.7e-09 65.1 32 84.4
CBR_g51299 Chara braunii HOM05D004438 ORTHO05D005256 1.1e-08 63.5 35 77.1
SalBow1G8643 Salvia bowleyana HOM05D000379 ORTHO05D000254 7.0e-08 60.8 33 75.8


User provided reference genes

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