Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib251G0953 Durio zibethinus HOM05D000082 ORTHO05D000038 8.9e-54 213.4 110 100.0
Duzib268G0748 Durio zibethinus HOM05D000082 ORTHO05D000038 2.9e-36 155.2 107 72.0
Gohir.D12G169600 Gossypium hirsutum HOM05D000082 ORTHO05D000038 4.3e-24 114.8 107 56.1
Gorai.008G182200 Gossypium raimondii HOM05D000082 ORTHO05D000038 4.3e-24 114.8 107 56.1
Thecc.02G319000 Theobroma cacao HOM05D000082 ORTHO05D000038 4.3e-24 114.8 110 56.4
Thecc.02G351500 Theobroma cacao HOM05D000082 ORTHO05D000038 9.5e-24 113.6 113 58.4
Thecc.02G353000 Theobroma cacao HOM05D000082 ORTHO05D000038 1.4e-22 109.8 115 57.4
Thecc.02G351100 Theobroma cacao HOM05D000082 ORTHO05D000038 2.4e-22 109.0 115 56.5
Thecc.02G351200 Theobroma cacao HOM05D000082 ORTHO05D000038 1.2e-21 106.7 112 54.5
Thecc.02G293800 Theobroma cacao HOM05D000082 ORTHO05D000038 7.6e-21 104.0 105 55.2
Thecc.02G293700 Theobroma cacao HOM05D000082 ORTHO05D000038 1.7e-20 102.8 103 55.3
Thecc.02G348000 Theobroma cacao HOM05D000082 ORTHO05D000038 1.7e-20 102.8 110 57.3
Thecc.02G351300 Theobroma cacao HOM05D000082 ORTHO05D000038 1.7e-20 102.8 103 60.2
Thecc.02G348200 Theobroma cacao HOM05D000082 ORTHO05D000038 2.2e-20 102.4 117 53.8
Thecc.02G348300 Theobroma cacao HOM05D000082 ORTHO05D000038 2.2e-20 102.4 103 60.2
Thecc.07G132400 Theobroma cacao HOM05D000082 ORTHO05D000038 6.4e-20 100.9 112 55.4
Thecc.02G352600 Theobroma cacao HOM05D000082 ORTHO05D000038 5.4e-19 97.8 104 55.8
Thecc.02G351600 Theobroma cacao HOM05D000082 ORTHO05D000038 1.0e-17 93.6 113 49.6
Thecc.02G348400 Theobroma cacao HOM05D000082 ORTHO05D000038 6.6e-17 90.9 114 48.2
Duzib268G1827 Durio zibethinus HOM05D000082 ORTHO05D000038 1.5e-16 89.7 112 51.8
Thecc.02G294000 Theobroma cacao HOM05D000082 ORTHO05D000038 5.6e-16 87.8 113 46.9
Gohir.A12G166150 Gossypium hirsutum HOM05D000082 ORTHO05D000038 2.8e-15 85.5 107 48.6
COL.COLO4_22964 Corchorus olitorius HOM05D000082 ORTHO05D000038 1.2e-13 80.1 112 42.9
Gorai.013G082800 Gossypium raimondii HOM05D000082 ORTHO05D000038 1.3e-12 76.6 101 46.5
Gohir.D13G072150 Gossypium hirsutum HOM05D000082 ORTHO05D000038 3.8e-12 75.1 114 43.9
Gorai.009G425900 Gossypium raimondii HOM05D000082 ORTHO05D000038 2.7e-10 68.9 101 44.6
Gohir.D08G051222 Gossypium hirsutum HOM05D000082 ORTHO05D000038 3.5e-10 68.6 101 45.5
Gohir.D08G051244 Gossypium hirsutum HOM05D000082 ORTHO05D000038 3.5e-10 68.6 101 45.5
Gohir.D08G051266 Gossypium hirsutum HOM05D000082 ORTHO05D000038 3.5e-10 68.6 101 45.5
Gohir.D08G051288 Gossypium hirsutum HOM05D000082 ORTHO05D000038 3.5e-10 68.6 101 45.5
Gohir.D08G051310 Gossypium hirsutum HOM05D000082 ORTHO05D000038 3.5e-10 68.6 101 45.5
Gohir.D05G366033 Gossypium hirsutum HOM05D000082 ORTHO05D000038 4.6e-10 68.2 101 44.6
Gorai.004G051200 Gossypium raimondii HOM05D000082 ORTHO05D000038 7.8e-10 67.4 101 45.5
Gohir.A08G041300 Gossypium hirsutum HOM05D000082 ORTHO05D000038 1.0e-09 67.0 101 45.5
Gohir.D08G047575 Gossypium hirsutum HOM05D000082 ORTHO05D000038 1.0e-09 67.0 101 43.6
Gorai.004G047000 Gossypium raimondii HOM05D000082 ORTHO05D000038 1.0e-09 67.0 101 43.6
Gohir.A08G037200 Gossypium hirsutum HOM05D000082 ORTHO05D000038 1.3e-09 66.6 101 43.6
Gohir.A08G045235 Gossypium hirsutum HOM05D000082 ORTHO05D000038 2.3e-09 65.9 101 43.6
Gohir.D13G074500 Gossypium hirsutum HOM05D000082 ORTHO05D000038 3.9e-09 65.1 86 46.5
Gorai.013G085100 Gossypium raimondii HOM05D000082 ORTHO05D000038 3.9e-09 65.1 86 46.5
Gorai.004G046800 Gossypium raimondii HOM05D000082 ORTHO05D000038 6.6e-09 64.3 101 42.6
Gohir.A13G072233 Gossypium hirsutum HOM05D000082 ORTHO05D000038 8.7e-09 63.9 86 44.2
Gorai.004G056300 Gossypium raimondii HOM05D000082 ORTHO05D000038 8.7e-09 63.9 101 42.6
QL03p065182 Quercus lobata HOM05D053392 ORTHO05D000038 1.1e-08 63.5 93 44.1
Gohir.A08G037100 Gossypium hirsutum HOM05D000082 ORTHO05D000038 1.9e-08 62.8 101 42.6
Gohir.A08G037150 Gossypium hirsutum HOM05D000082 ORTHO05D000038 1.9e-08 62.8 99 44.4
Gohir.D05G366066 Gossypium hirsutum HOM05D000082 ORTHO05D000038 1.9e-08 62.8 112 42.0
Gohir.A07G199450 Gossypium hirsutum HOM05D000082 ORTHO05D000038 5.6e-08 61.2 101 38.6
Gohir.A08G001150 Gossypium hirsutum HOM05D000082 ORTHO05D000038 7.3e-08 60.8 101 38.6
Gorai.001G232000 Gossypium raimondii HOM05D000082 ORTHO05D000038 7.3e-08 60.8 101 40.6
Gohir.D07G205866 Gossypium hirsutum HOM05D000082 ORTHO05D000038 9.6e-08 60.5 101 38.6
COL.COLO4_16605 Corchorus olitorius HOM05D007597 ORTHO05D009608 1.3e-07 60.1 99 43.4
Gohir.A08G000121 Gossypium hirsutum HOM05D000082 ORTHO05D000038 1.6e-07 59.7 101 37.6
Gohir.A13G071833 Gossypium hirsutum HOM05D000082 ORTHO05D000038 1.6e-07 59.7 64 50.0
Gorai.001G232200 Gossypium raimondii HOM05D000082 ORTHO05D000038 1.6e-07 59.7 101 37.6
Gohir.A08G037000 Gossypium hirsutum HOM05D000082 ORTHO05D000038 2.8e-07 58.9 101 41.6
Gohir.D11G055901 Gossypium hirsutum HOM05D000082 ORTHO05D000038 6.2e-07 57.8 92 40.2
Gorai.004G002900 Gossypium raimondii HOM05D000082 ORTHO05D000038 6.2e-07 57.8 101 37.6
Gohir.D08G009750 Gossypium hirsutum HOM05D000082 ORTHO05D000038 8.1e-07 57.4 101 36.6
Gohir.D08G047550 Gossypium hirsutum HOM05D000082 ORTHO05D000038 8.1e-07 57.4 65 52.3
Gorai.004G046900 Gossypium raimondii HOM05D000082 ORTHO05D000038 8.1e-07 57.4 65 52.3
Gorai.013G085300 Gossypium raimondii HOM05D000082 ORTHO05D000038 1.4e-06 56.6 115 34.8
COL.COLO4_16607 Corchorus olitorius HOM05D000082 ORTHO05D009608 1.8e-06 56.2 96 41.7
Gohir.D07G205833 Gossypium hirsutum HOM05D000082 ORTHO05D000038 3.1e-06 55.5 101 36.6
Gohir.D08G055540 Gossypium hirsutum HOM05D000082 ORTHO05D000038 5.3e-06 54.7 96 37.5
Gohir.D13G074651 Gossypium hirsutum HOM05D000082 ORTHO05D000038 6.9e-06 54.3 115 35.7


User provided reference genes

Program Settings