Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib251G0915 Durio zibethinus HOM05D005568 ORTHO05D006940 2.0e-43 178.7 89 100.0
COL.COLO4_27886 Corchorus olitorius HOM05D005568 ORTHO05D006940 4.2e-30 134.4 75 92.0
Duzib248G1642 Durio zibethinus HOM05D005568 ORTHO05D006940 4.2e-30 134.4 75 92.0
Ca_04974_v3 Cicer arietinum L. HOM05D005568 ORTHO05D006940 5.5e-30 134.0 75 90.7
Ca_27228_v3 Cicer arietinum L. HOM05D005568 ORTHO05D006940 5.5e-30 134.0 75 90.7
Cc11_g11980 Coffea canephora HOM05D005568 ORTHO05D006940 5.5e-30 134.0 75 90.7
Haze_11911 Corylus avellana HOM05D005568 ORTHO05D006940 5.5e-30 134.0 75 90.7
Dinv16731 Davidia involucrata HOM05D005568 ORTHO05D006940 5.5e-30 134.0 75 90.7
Glyma.01G059200 Glycine max HOM05D005568 ORTHO05D006940 5.5e-30 134.0 75 90.7
Lj2g0017860 Lotus japonicus HOM05D005568 ORTHO05D006940 5.5e-30 134.0 75 90.7
MD16G1061400 Malus domestica HOM05D005568 ORTHO05D006940 5.5e-30 134.0 75 90.7
Manes.01G027700 Manihot esculenta HOM05D005568 ORTHO05D006940 5.5e-30 134.0 75 90.7
Medtr5g044720 Medicago truncatula HOM05D005568 ORTHO05D006940 5.5e-30 134.0 75 90.7
Prupe.1G286700 Prunus persica HOM05D005568 ORTHO05D006940 5.5e-30 134.0 75 90.7
TPR.G24479 Trifolium pratense HOM05D005568 ORTHO05D006940 5.5e-30 134.0 75 90.7
GSVIVG01012218001 Vitis vinifera HOM05D005568 ORTHO05D006940 5.5e-30 134.0 75 90.7
Actinidia16167 Actinidia chinensis HOM05D005568 ORTHO05D006940 7.2e-30 133.7 75 89.3
arahy.Tifrunner.gnm1.ann1.0F7ZXJ Arachis hypogaea HOM05D005568 ORTHO05D006940 7.2e-30 133.7 74 91.9
arahy.Tifrunner.gnm1.ann1.H69QIP Arachis hypogaea HOM05D005568 ORTHO05D006940 7.2e-30 133.7 74 91.9
CiPaw.05G125400 Carya illinoinensis HOM05D005568 ORTHO05D006940 7.2e-30 133.7 75 89.3
Ciclev10031554m.g Citrus clementina HOM05D005568 ORTHO05D006940 7.2e-30 133.7 75 89.3
Lalb_Chr10g0098831 Lupinus albus HOM05D005568 ORTHO05D006940 9.4e-30 133.3 75 89.3
CANSAT64G0560 Cannabis sativa HOM05D005568 ORTHO05D006940 1.2e-29 132.9 75 89.3
Lsat_1_v5_gn_8_46541 Lactuca sativa HOM05D005568 ORTHO05D006940 1.2e-29 132.9 75 88.0
Thecc.02G330600 Theobroma cacao HOM05D005568 ORTHO05D006940 1.2e-29 132.9 75 90.7
Aqoxy3G03640 Aquilegia oxysepala HOM05D005568 ORTHO05D006940 1.6e-29 132.5 75 89.3
Lj6A779T68 Lonicera japonica HOM05D005568 ORTHO05D006940 1.6e-29 132.5 75 89.3
Phvul.003G042500 Phaseolus vulgaris HOM05D005568 ORTHO05D006940 1.6e-29 132.5 75 89.3
SGA_v2.0_scaffold36G14456 Striga asiatica HOM05D005568 ORTHO05D006940 1.6e-29 132.5 75 88.0
TAR622G0890 Trochodendron aralioides HOM05D005568 ORTHO05D006940 1.6e-29 132.5 75 89.3
VMungo1215G2929 Vigna mungo HOM05D005568 ORTHO05D006940 1.6e-29 132.5 75 89.3
arahy.Tifrunner.gnm1.ann1.MYF1K6 Arachis hypogaea HOM05D005568 ORTHO05D006940 2.1e-29 132.1 74 90.5
Gohir.A12G161300 Gossypium hirsutum HOM05D005568 ORTHO05D006940 2.1e-29 132.1 75 90.7
Gorai.008G177200 Gossypium raimondii HOM05D005568 ORTHO05D006940 2.1e-29 132.1 75 90.7
Potri.008G095700 Populus trichocarpa HOM05D005568 ORTHO05D006940 2.1e-29 132.1 75 89.3
Rhsim09G0127600 Rhododendron simsii HOM05D005568 ORTHO05D006940 2.1e-29 132.1 75 88.0
EL10Ac5g12478 Beta vulgaris HOM05D005568 ORTHO05D006940 2.7e-29 131.7 75 89.3
Nn3g17444 Nelumbo nucifera HOM05D005568 ORTHO05D006940 2.7e-29 131.7 75 88.0
Oeu004582.1 Olea europaea HOM05D005568 ORTHO05D006940 2.7e-29 131.7 75 86.7
QL12p030796 Quercus lobata HOM05D005568 ORTHO05D006940 2.7e-29 131.7 75 89.3
TWI31G1152 Tripterygium wilfordii HOM05D005568 ORTHO05D006940 2.7e-29 131.7 75 88.0
ClCG08G010410 Citrullus lanatus HOM05D005568 ORTHO05D006940 4.7e-29 131.0 75 88.0
MELO3C011420.2 Cucumis melo HOM05D005568 ORTHO05D006940 4.7e-29 131.0 75 88.0
CsaV3_6G033680 Cucumis sativus L. HOM05D005568 ORTHO05D006940 4.7e-29 131.0 75 88.0
PGR102G3278 Punica granatum HOM05D005568 ORTHO05D006940 4.7e-29 131.0 75 88.0
Sc11g0002440 Simmondsia chinensis HOM05D005568 ORTHO05D006940 4.7e-29 131.0 75 88.0
ECA233G1797 Erigeron canadensis HOM05D005568 ORTHO05D006940 6.1e-29 130.6 75 86.7
Eucgr.B03151 Eucalyptus grandis HOM05D005568 ORTHO05D006940 6.1e-29 130.6 75 86.7
HanXRQChr08g0211781 Helianthus annuus HOM05D005568 ORTHO05D006940 6.1e-29 130.6 75 86.7
SalBow2G0760 Salvia bowleyana HOM05D005568 ORTHO05D006940 6.1e-29 130.6 75 86.7
DCAR_030041 Daucus carota HOM05D005568 ORTHO05D006940 8.0e-29 130.2 75 88.0
Migut.L01192 Erythranthe guttata HOM05D005568 ORTHO05D006940 8.0e-29 130.2 75 88.0
FvH4_4g30090 Fragaria vesca HOM05D005568 ORTHO05D006940 8.0e-29 130.2 75 88.0
FAN07G0232 Fragaria x ananassa HOM05D005568 ORTHO05D006940 8.0e-29 130.2 75 88.0
FAN12G3709 Fragaria x ananassa HOM05D005568 ORTHO05D006940 8.0e-29 130.2 75 88.0
FAN17G2544 Fragaria x ananassa HOM05D005568 ORTHO05D006940 8.0e-29 130.2 75 88.0
FAN22G1579 Fragaria x ananassa HOM05D005568 ORTHO05D006940 8.0e-29 130.2 75 88.0
Oeu025279.1 Olea europaea HOM05D005568 ORTHO05D006940 1.4e-28 129.4 75 86.7
THA.LOC104824056 Tarenaya hassleriana HOM05D005568 ORTHO05D006940 1.4e-28 129.4 75 86.7
HPP92_024923 Vanilla planifolia HOM05D005568 ORTHO05D006940 1.4e-28 129.4 75 86.7
Atru.BG.280.p Acer truncatum HOM05D005568 ORTHO05D006940 2.3e-28 128.6 75 85.3
CSS0039095 Camellia sinensis var. sinensis HOM05D005568 ORTHO05D006940 2.3e-28 128.6 71 90.1
vmacro10423 Vaccinium macrocarpon HOM05D005568 ORTHO05D006940 2.3e-28 128.6 75 86.7
Aa31LG1G1170 Aethionema arabicum HOM05D005568 ORTHO05D006940 3.0e-28 128.3 75 85.3
Ah.12g059120 Amaranthus hybridus HOM05D005568 ORTHO05D006940 3.0e-28 128.3 75 86.7
AL1G25570 Arabidopsis lyrata HOM05D005568 ORTHO05D006940 3.0e-28 128.3 75 85.3
BcaB02g06475 Brassica carinata HOM05D005568 ORTHO05D006940 3.0e-28 128.3 75 85.3
BcaC05g25284 Brassica carinata HOM05D005568 ORTHO05D006940 3.0e-28 128.3 75 85.3
A06p09820 Brassica napus HOM05D005568 ORTHO05D006940 3.0e-28 128.3 75 85.3
C05p11620 Brassica napus HOM05D005568 ORTHO05D006940 3.0e-28 128.3 75 85.3
BolC5t29908H Brassica oleracea HOM05D005568 ORTHO05D006940 3.0e-28 128.3 75 85.3
BraA06t24172Z Brassica rapa HOM05D005568 ORTHO05D006940 3.0e-28 128.3 75 85.3
Carub.0001s1349 Capsella rubella HOM05D005568 ORTHO05D006940 3.0e-28 128.3 75 85.3
CARHR014160 Cardamine hirsuta HOM05D005568 ORTHO05D006940 3.0e-28 128.3 75 85.3
Sp1g12160 Schrenkiella parvula HOM05D005568 ORTHO05D006940 3.0e-28 128.3 75 85.3
Solyc05g012290.3 Solanum lycopersicum HOM05D005568 ORTHO05D006940 3.0e-28 128.3 75 86.7
Sopen05g007120 Solanum pennellii HOM05D005568 ORTHO05D006940 3.0e-28 128.3 75 86.7
PGSC0003DMG400028318 Solanum tuberosum HOM05D005568 ORTHO05D006940 3.0e-28 128.3 75 86.7
AT1G13770 Arabidopsis thaliana HOM05D005568 ORTHO05D006940 4.0e-28 127.9 74 86.5
unitig_22.g6492 Utricularia gibba HOM05D005568 ORTHO05D006940 4.0e-28 127.9 71 91.5
PSO017G2580 Papaver somniferum HOM05D005568 ORTHO05D006940 5.2e-28 127.5 73 87.7
PSO478G2131 Papaver somniferum HOM05D005568 ORTHO05D006940 5.2e-28 127.5 73 87.7
Peaxi162Scf00175g00125 Petunia axillaris HOM05D005568 ORTHO05D006940 5.2e-28 127.5 75 85.3
Zm00001eb400240 Zea mays HOM05D005568 ORTHO05D006940 5.2e-28 127.5 75 85.3
Thhalv10007655m.g Eutrema salsugineum HOM05D005568 ORTHO05D006940 8.8e-28 126.7 75 84.0
Sed0026263 Sechium edule HOM05D005568 ORTHO05D006940 8.8e-28 126.7 72 88.9
CAN.G616.43 Capsicum annuum HOM05D005568 ORTHO05D006940 1.2e-27 126.3 72 88.9
Glyma.02G116633 Glycine max HOM05D005568 ORTHO05D006940 2.0e-27 125.6 75 86.7
Gohir.D12G164600 Gossypium hirsutum HOM05D005568 ORTHO05D006940 2.6e-27 125.2 67 91.0
ATR0907G009 Amborella trichopoda HOM05D005568 ORTHO05D006940 5.7e-27 124.0 75 81.3
MBI16_g24180_MAGBIO Magnolia biondii HOM05D005568 ORTHO05D006940 5.7e-27 124.0 75 82.7
Sabra08G0072100 Salix brachista HOM05D005568 ORTHO05D006940 5.7e-27 124.0 71 88.7
Hund10887 Selenicereus undatus HOM05D005568 ORTHO05D006940 5.7e-27 124.0 66 89.4
SEGI_27210 Sequoiadendron giganteum HOM05D005568 ORTHO05D006940 5.7e-27 124.0 75 82.7
Nitab4.5_0001487g0140 Nicotiana tabacum HOM05D005568 ORTHO05D006940 1.3e-26 122.9 71 87.3
Nitab4.5_0000231g0340 Nicotiana tabacum HOM05D005568 ORTHO05D006940 3.7e-26 121.3 71 85.9
SalBow7G2616 Salvia bowleyana HOM05D005568 ORTHO05D006940 1.4e-25 119.4 63 88.9
CDE05G1057 Ceratophyllum demersum HOM05D005568 ORTHO05D006940 4.1e-25 117.9 63 87.3
Mapoly0001s0066 Marchantia polymorpha HOM05D005568 ORTHO05D006940 4.5e-24 114.4 75 74.7
AagrBONN_evm.TU.Sc2ySwM_117.168 Anthoceros agrestis HOM05D005568 ORTHO05D006940 2.2e-23 112.1 75 72.0
SMO343G0031 Selaginella moellendorffii HOM05D005568 ORTHO05D006940 1.1e-22 109.8 75 72.0
CBR_g29960 Chara braunii HOM05D005568 ORTHO05D006940 1.5e-22 109.4 75 68.0
Pp3c17_20490 Physcomitrium patens HOM05D005568 ORTHO05D006940 1.2e-21 106.3 75 68.0
SMO367G0699 Selaginella moellendorffii HOM05D005568 ORTHO05D006940 2.1e-21 105.5 71 73.2
Hma1.2p1_0354F.1_g133380 Hydrangea macrophylla HOM05D005568 ORTHO05D006940 2.4e-17 92.0 72 72.2
AUR62036400 Chenopodium quinoa HOM05D005568 ORTHO05D006940 6.6e-15 84.0 50 88.0
RcHm_v2.0_Chr4g0438381 Rosa chinensis HOM05D005568 ORTHO05D006940 1.2e-13 79.7 42 90.5
CSS0033582 Camellia sinensis var. sinensis HOM05D005568 ORTHO05D006940 2.1e-13 79.0 47 87.2
Lj6g0027042 Lotus japonicus HOM05D005568 ORTHO05D006940 3.6e-13 78.2 71 66.2
AUR62030755 Chenopodium quinoa HOM05D005568 ORTHO05D006940 8.9e-12 73.6 65 63.1
Cre16.g671150 Chlamydomonas reinhardtii HOM05D005568 ORTHO05D006940 8.9e-12 73.6 73 47.9
Hma1.2p1_0566F.1_g179750 Hydrangea macrophylla HOM05D005568 ORTHO05D006940 8.9e-12 73.6 36 94.4
MCO13G536 Micromonas commoda HOM05D005568 ORTHO05D006940 9.8e-11 70.1 70 47.1
DCAR_007195 Daucus carota HOM05D005568 ORTHO05D006940 1.7e-10 69.3 45 80.0
Atru.chr11.1627 Acer truncatum HOM05D005568 ORTHO05D006940 3.7e-10 68.2 36 83.3
Psat2g130160 Pisum sativum HOM05D005568 ORTHO05D006940 1.1e-09 66.6 40 87.5
PRCOL_00005711 Prasinoderma coloniale HOM05D005568 ORTHO05D006940 2.7e-08 62.0 61 47.5


User provided reference genes

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