Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib251G0852 Durio zibethinus HOM05D006617 ORTHO05D008247 5.2e-159 564.3 282 100.0
Thecc.02G366400 Theobroma cacao HOM05D006617 ORTHO05D008247 2.2e-120 436.0 284 78.9
COL.COLO4_11251 Corchorus olitorius HOM05D006617 ORTHO05D008247 6.3e-120 434.5 279 78.5
Gohir.D12G177000 Gossypium hirsutum HOM05D006617 ORTHO05D008247 8.2e-120 434.1 284 77.5
Gorai.008G189400 Gossypium raimondii HOM05D006617 ORTHO05D008247 8.2e-120 434.1 284 77.5
Gohir.A12G174300 Gossypium hirsutum HOM05D006617 ORTHO05D008247 4.5e-118 428.3 284 76.4
Atru.chr6.3216 Acer truncatum HOM05D006617 ORTHO05D008247 1.9e-92 343.2 240 71.2
Dinv38979 Davidia involucrata HOM05D006617 ORTHO05D008247 4.2e-92 342.0 229 72.5
CSS0023405 Camellia sinensis var. sinensis HOM05D006617 ORTHO05D008247 1.4e-90 337.0 278 62.2
Ciclev10016122m.g Citrus clementina HOM05D006617 ORTHO05D008247 5.2e-90 335.1 229 69.9
Actinidia14540 Actinidia chinensis HOM05D006617 ORTHO05D008247 6.8e-90 334.7 242 68.2
GSVIVG01019803001 Vitis vinifera HOM05D006617 ORTHO05D008247 1.2e-89 334.0 280 60.7
Potri.014G154900 Populus trichocarpa HOM05D006617 ORTHO05D008247 1.5e-89 333.6 282 62.8
QL12p017915 Quercus lobata HOM05D006617 ORTHO05D008247 4.8e-88 328.6 245 65.3
Cpa.g.sc39.21 Carica papaya HOM05D006617 ORTHO05D008247 6.3e-88 328.2 222 70.7
Hma1.2p1_0514F.1_g169800 Hydrangea macrophylla HOM05D006617 ORTHO05D008247 8.3e-88 327.8 250 67.2
TWI36G1290 Tripterygium wilfordii HOM05D006617 ORTHO05D008247 1.4e-87 327.0 275 61.5
Manes.12G073000 Manihot esculenta HOM05D006617 ORTHO05D008247 5.4e-87 325.1 229 69.4
Lj8A235T58 Lonicera japonica HOM05D006617 ORTHO05D008247 9.1e-87 324.3 248 62.5
Prupe.5G095100 Prunus persica HOM05D006617 ORTHO05D008247 2.0e-86 323.2 229 67.7
Nn6g33542 Nelumbo nucifera HOM05D006617 ORTHO05D008247 7.7e-86 321.2 250 62.8
CiPaw.11G138400 Carya illinoinensis HOM05D006617 ORTHO05D008247 1.3e-85 320.5 226 68.6
SalBow6G1063 Salvia bowleyana HOM05D006617 ORTHO05D008247 1.3e-85 320.5 269 58.0
VMungo0251G0775 Vigna mungo HOM05D006617 ORTHO05D008247 1.3e-85 320.5 249 63.1
CsaV3_4G006040 Cucumis sativus L. HOM05D006617 ORTHO05D008247 2.2e-85 319.7 226 69.0
Cc08_g14300 Coffea canephora HOM05D006617 ORTHO05D008247 3.8e-85 318.9 228 68.0
Phvul.002G287200 Phaseolus vulgaris HOM05D006617 ORTHO05D008247 8.5e-85 317.8 247 62.3
MELO3C016345.2 Cucumis melo HOM05D006617 ORTHO05D008247 1.1e-84 317.4 228 68.0
Medtr8g096960 Medicago truncatula HOM05D006617 ORTHO05D008247 3.2e-84 315.8 242 63.2
FAN04G2914 Fragaria x ananassa HOM05D006617 ORTHO05D008247 5.5e-84 315.1 282 58.2
Sc22g0000340 Simmondsia chinensis HOM05D006617 ORTHO05D008247 5.5e-84 315.1 247 61.9
RcHm_v2.0_Chr7g0198641 Rosa chinensis HOM05D006617 ORTHO05D008247 7.2e-84 314.7 282 57.4
THA.LOC104800995 Tarenaya hassleriana HOM05D006617 ORTHO05D008247 7.2e-84 314.7 241 63.9
Eucgr.D01883 Eucalyptus grandis HOM05D006617 ORTHO05D008247 2.1e-83 313.2 275 58.2
Glyma.05G205300 Glycine max HOM05D006617 ORTHO05D008247 2.1e-83 313.2 247 61.1
Migut.A00797 Erythranthe guttata HOM05D006617 ORTHO05D008247 2.7e-83 312.8 242 60.7
MD06G1077000 Malus domestica HOM05D006617 ORTHO05D008247 6.1e-83 311.6 229 65.1
Sed0011813 Sechium edule HOM05D006617 ORTHO05D008247 8.0e-83 311.2 247 62.8
CAN.G26.17 Capsicum annuum HOM05D006617 ORTHO05D008247 3.0e-82 309.3 251 58.2
TPR.G12841 Trifolium pratense HOM05D006617 ORTHO05D008247 3.0e-82 309.3 283 56.2
Lj4g0017727 Lotus japonicus HOM05D006617 ORTHO05D008247 4.0e-82 308.9 236 63.1
Ah.12g057360 Amaranthus hybridus HOM05D006617 ORTHO05D008247 1.5e-81 307.0 242 62.0
Psat7g035840 Pisum sativum HOM05D006617 ORTHO05D008247 1.5e-81 307.0 245 62.0
Thhalv10017053m.g Eutrema salsugineum HOM05D006617 ORTHO05D008247 2.0e-81 306.6 240 60.8
PGSC0003DMG400004251 Solanum tuberosum HOM05D006617 ORTHO05D008247 2.0e-81 306.6 264 56.8
Ca_17553_v3 Cicer arietinum L. HOM05D006617 ORTHO05D008247 7.5e-81 304.7 246 60.6
Glyma.08G012200 Glycine max HOM05D006617 ORTHO05D008247 9.8e-81 304.3 247 60.3
HanXRQChr12g0384501 Helianthus annuus HOM05D006617 ORTHO05D008247 9.8e-81 304.3 279 56.3
Lalb_Chr05g0224971 Lupinus albus HOM05D006617 ORTHO05D008247 9.8e-81 304.3 267 57.7
PSO478G3588 Papaver somniferum HOM05D006617 ORTHO05D008247 9.8e-81 304.3 226 65.0
Solyc12g056350.2 Solanum lycopersicum HOM05D006617 ORTHO05D008247 9.8e-81 304.3 288 53.8
Sopen12g028920 Solanum pennellii HOM05D006617 ORTHO05D008247 9.8e-81 304.3 288 54.2
PSO782G1088 Papaver somniferum HOM05D006617 ORTHO05D008247 1.3e-80 303.9 226 64.6
FAN13G2116 Fragaria x ananassa HOM05D006617 ORTHO05D008247 3.7e-80 302.4 275 57.5
arahy.Tifrunner.gnm1.ann1.164QK4 Arachis hypogaea HOM05D006617 ORTHO05D008247 1.4e-79 300.4 237 63.3
arahy.Tifrunner.gnm1.ann1.90PEWX Arachis hypogaea HOM05D006617 ORTHO05D008247 1.4e-79 300.4 237 63.3
AL4G27880 Arabidopsis lyrata HOM05D006617 ORTHO05D008247 4.1e-79 298.9 261 56.3
EL10Ac5g12764 Beta vulgaris HOM05D006617 ORTHO05D008247 9.1e-79 297.7 228 63.2
Lsat_1_v5_gn_6_6941 Lactuca sativa HOM05D006617 ORTHO05D008247 1.2e-78 297.4 248 60.5
BcaB01g03976 Brassica carinata HOM05D006617 ORTHO05D008247 1.6e-78 297.0 274 54.7
DCAR_008412 Daucus carota HOM05D006617 ORTHO05D008247 1.6e-78 297.0 243 60.1
ECA233G3703 Erigeron canadensis HOM05D006617 ORTHO05D008247 7.7e-78 294.7 285 54.7
Sp4g14850 Schrenkiella parvula HOM05D006617 ORTHO05D008247 1.0e-77 294.3 240 59.2
Carub.0004s1384 Capsella rubella HOM05D006617 ORTHO05D008247 1.3e-77 293.9 284 52.5
A03p18190 Brassica napus HOM05D006617 ORTHO05D008247 2.5e-76 289.7 225 60.9
BraA03t11079Z Brassica rapa HOM05D006617 ORTHO05D008247 2.5e-76 289.7 225 60.9
C03p21220 Brassica napus HOM05D006617 ORTHO05D008247 1.6e-75 287.0 262 54.6
BolC3t14504H Brassica oleracea HOM05D006617 ORTHO05D008247 1.6e-75 287.0 262 54.6
BcaC01g05904 Brassica carinata HOM05D006617 ORTHO05D008247 3.6e-75 285.8 262 54.6
TAR375G0379 Trochodendron aralioides HOM05D006617 ORTHO05D008247 2.3e-74 283.1 225 63.6
Sabra14G0117100 Salix brachista HOM05D006617 ORTHO05D008247 5.2e-74 282.0 200 70.0
Aa31LG5G4800 Aethionema arabicum HOM05D006617 ORTHO05D008247 8.3e-72 274.6 227 60.4
FvH4_5g01880 Fragaria vesca HOM05D006617 ORTHO05D008247 2.4e-71 273.1 253 57.7
FAN08G3651 Fragaria x ananassa HOM05D006617 ORTHO05D008247 2.4e-71 273.1 253 57.7
Peaxi162Scf01294g00327 Petunia axillaris HOM05D006617 ORTHO05D008247 1.6e-70 270.4 225 59.1
ATR0680G238 Amborella trichopoda HOM05D006617 ORTHO05D008247 2.0e-70 270.0 228 56.1
FAN18G0570 Fragaria x ananassa HOM05D006617 ORTHO05D008247 2.0e-70 270.0 253 56.9
Os03g0110900 Oryza sativa ssp. japonica HOM05D006617 ORTHO05D008247 2.7e-70 269.6 246 53.7
Hund11496 Selenicereus undatus HOM05D006617 ORTHO05D008247 1.7e-69 266.9 219 60.7
HPP92_004974 Vanilla planifolia HOM05D006617 ORTHO05D008247 2.9e-69 266.2 246 53.7
AUR62017243 Chenopodium quinoa HOM05D006617 ORTHO05D008247 3.9e-69 265.8 244 56.1
PGR031G1807 Punica granatum HOM05D006617 ORTHO05D008247 5.0e-69 265.4 203 64.5
AUR62010601 Chenopodium quinoa HOM05D000030 ORTHO05D008247 2.5e-68 263.1 221 60.6
Zm00001eb404120 Zea mays HOM05D006617 ORTHO05D008247 5.2e-66 255.4 235 53.2
ClCG07G007980 Citrullus lanatus HOM05D006617 ORTHO05D008247 8.9e-66 254.6 186 65.6
Haze_08904 Corylus avellana HOM05D006617 ORTHO05D008247 8.3e-64 248.1 212 59.0
Haze_08908 Corylus avellana HOM05D006617 ORTHO05D008247 8.3e-64 248.1 236 55.1
MBI18_g01147_MAGBIO Magnolia biondii HOM05D006617 ORTHO05D008247 2.0e-62 243.4 190 62.6
SEGI_22684 Sequoiadendron giganteum HOM05D006617 ORTHO05D008247 9.5e-60 234.6 255 47.1
SGA_v2.0_scaffold146G36248 Striga asiatica HOM05D006617 ORTHO05D008247 1.6e-59 233.8 193 58.5
Oeu025101.1 Olea europaea HOM05D006617 ORTHO05D008247 1.7e-56 223.8 165 64.8
Actinidia02025 Actinidia chinensis HOM05D006617 ORTHO05D008247 1.4e-55 220.7 182 63.7
Nitab4.5_0010198g0030 Nicotiana tabacum HOM05D006617 ORTHO05D008247 2.1e-54 216.9 266 44.7
AT2G32500 Arabidopsis thaliana HOM05D006617 ORTHO05D008247 1.5e-52 210.7 221 50.2
Nitab4.5_0000360g0080 Nicotiana tabacum HOM05D006617 ORTHO05D008247 2.1e-51 206.8 180 56.1
Hma1.2p1_3255F.1_g334560 Hydrangea macrophylla HOM05D006617 ORTHO05D008247 5.1e-45 185.7 178 57.3
Pp3c20_8200 Physcomitrium patens HOM05D006617 ORTHO05D008247 1.8e-42 177.2 220 43.6
Aqoxy7G00382 Aquilegia oxysepala HOM05D006617 ORTHO05D008247 1.5e-41 174.1 133 63.2
SMO329G0076 Selaginella moellendorffii HOM05D006617 ORTHO05D008247 2.6e-41 173.3 222 39.6
CARHR126330 Cardamine hirsuta HOM05D006617 ORTHO05D008247 2.2e-40 170.2 134 58.2
Nitab4.5_0029474g0010 Nicotiana tabacum HOM05D006617 ORTHO05D008247 1.1e-39 167.9 156 51.3
AagrBONN_evm.TU.Sc2ySwM_228.4793 Anthoceros agrestis HOM05D006617 ORTHO05D008247 1.9e-39 167.2 222 38.7
MSTRG.12003 Avicennia marina HOM05D006617 ORTHO05D008247 6.6e-29 132.1 113 54.0
Aqoxy7G00383 Aquilegia oxysepala HOM05D006617 ORTHO05D008247 4.3e-28 129.4 122 51.6
AUR62042944 Chenopodium quinoa HOM05D006617 ORTHO05D008247 6.2e-27 125.6 134 47.8
Mapoly0086s0010 Marchantia polymorpha HOM05D006617 ORTHO05D008247 9.9e-25 118.2 235 28.1
Pp3c7_1410 Physcomitrium patens HOM05D006617 ORTHO05D008247 8.4e-24 115.2 211 29.9
Mapoly0086s0005 Marchantia polymorpha HOM05D006617 ORTHO05D008247 1.9e-23 114.0 213 29.1
Glyma.05G087800 Glycine max HOM05D006617 ORTHO05D008247 5.6e-20 102.4 79 63.3
PRCOL_00003136 Prasinoderma coloniale HOM05D006617 ORTHO05D008247 9.6e-20 101.7 202 32.2
Pp3c8_19270 Physcomitrium patens HOM05D006617 ORTHO05D008247 1.3e-19 101.3 225 30.7
Lsat_1_v5_gn_8_1081 Lactuca sativa HOM05D006617 ORTHO05D008247 9.0e-18 95.1 108 48.1
CBR_g57728 Chara braunii HOM05D006617 ORTHO05D008247 3.0e-13 80.1 117 37.6
AagrBONN_evm.TU.Sc2ySwM_117.2950 Anthoceros agrestis HOM05D006617 ORTHO05D008247 1.1e-10 71.6 202 26.2
MD14G1098400 Malus domestica HOM05D006617 ORTHO05D008247 1.8e-10 70.9 68 58.8
CDE06G1437 Ceratophyllum demersum HOM05D006617 ORTHO05D008247 1.3e-08 64.7 45 68.9
SMO307G0050 Selaginella moellendorffii HOM05D037974 ORTHO05D008247 2.2e-08 63.9 208 26.4
MBI19_g11841_MAGBIO Magnolia biondii HOM05D003252 ORTHO05D003640 2.9e-08 63.5 223 22.4
AT2G31670 Arabidopsis thaliana HOM05D003252 ORTHO05D003640 3.5e-06 56.6 265 21.9
Gohir.A07G014600 Gossypium hirsutum HOM05D003252 ORTHO05D003640 7.9e-06 55.5 216 24.1
Hma1.2p1_0797F.1_g219490 Hydrangea macrophylla HOM05D003252 ORTHO05D003640 7.9e-06 55.5 175 25.1


User provided reference genes

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