Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib251G0690 Durio zibethinus HOM05D003968 ORTHO05D004077 1.3e-110 403.3 246 100.0
Duzib052G1223 Durio zibethinus HOM05D003968 ORTHO05D004077 6.3e-68 261.5 205 84.4
Duzib248G0844 Durio zibethinus HOM05D003968 ORTHO05D004077 2.4e-67 259.6 204 78.4
Gorai.008G156400 Gossypium raimondii HOM05D003968 ORTHO05D004077 2.5e-64 249.6 206 85.0
Gohir.A12G140400 Gossypium hirsutum HOM05D003968 ORTHO05D004077 4.3e-64 248.8 207 84.1
Gohir.D12G145000 Gossypium hirsutum HOM05D003968 ORTHO05D004077 5.6e-64 248.4 205 84.4
Thecc.02G196200 Theobroma cacao HOM05D003968 ORTHO05D004077 1.5e-61 240.4 204 80.9
Cfa009411 Carpinus fangiana HOM05D003968 ORTHO05D004077 5.0e-57 225.3 205 64.9
Haze_12469 Corylus avellana HOM05D003968 ORTHO05D004077 4.3e-56 222.2 205 62.4
QL03p050330 Quercus lobata HOM05D003968 ORTHO05D004077 3.6e-55 219.2 204 57.8
CiPaw.06G107600 Carya illinoinensis HOM05D003968 ORTHO05D004077 2.3e-54 216.5 200 64.0
CiPaw.05G103900 Carya illinoinensis HOM05D003968 ORTHO05D004077 8.9e-54 214.5 204 59.8
Manes.09G185900 Manihot esculenta HOM05D003968 ORTHO05D004077 8.9e-54 214.5 228 60.1
COL.COLO4_11740 Corchorus olitorius HOM05D003968 ORTHO05D004077 4.4e-53 212.2 213 68.5
Ciclev10032280m.g Citrus clementina HOM05D003968 ORTHO05D004077 2.2e-52 209.9 207 72.5
Potri.003G165800 Populus trichocarpa HOM05D003968 ORTHO05D004077 4.9e-52 208.8 204 62.3
Manes.08G103100 Manihot esculenta HOM05D003968 ORTHO05D004077 1.1e-51 207.6 213 61.0
FAN12G2512 Fragaria x ananassa HOM05D003968 ORTHO05D004077 2.4e-51 206.5 220 71.4
RcHm_v2.0_Chr4g0429341 Rosa chinensis HOM05D003968 ORTHO05D004077 4.1e-51 205.7 221 71.0
Potri.001G062000 Populus trichocarpa HOM05D003968 ORTHO05D004077 1.6e-50 203.8 206 60.2
Sabra03G0121000 Salix brachista HOM05D003968 ORTHO05D004077 4.6e-50 202.2 204 58.3
GSVIVG01000957001 Vitis vinifera HOM05D003968 ORTHO05D004077 7.8e-50 201.4 199 68.3
PGR057G0001 Punica granatum HOM05D003968 ORTHO05D004077 3.9e-49 199.1 202 67.8
PGR119G2322 Punica granatum HOM05D003968 ORTHO05D004077 3.9e-49 199.1 202 67.8
Dinv17895 Davidia involucrata HOM05D003968 ORTHO05D004077 5.0e-49 198.7 206 72.3
Sabra01G0044600 Salix brachista HOM05D003968 ORTHO05D004077 1.1e-48 197.6 208 59.1
vmacro22632 Vaccinium macrocarpon HOM05D003968 ORTHO05D004077 1.1e-48 197.6 201 73.1
Hma1.2p1_0459F.1_g157230 Hydrangea macrophylla HOM05D003968 ORTHO05D004077 1.9e-48 196.8 206 69.4
Sc11g0000210 Simmondsia chinensis HOM05D003968 ORTHO05D004077 1.9e-48 196.8 223 49.8
FvH4_4g23070 Fragaria vesca HOM05D003968 ORTHO05D004077 4.3e-48 195.7 223 68.2
Atru.chr11.2403 Acer truncatum HOM05D003968 ORTHO05D004077 1.6e-47 193.7 212 69.3
CSS0002178 Camellia sinensis var. sinensis HOM05D003968 ORTHO05D004077 2.1e-47 193.4 204 59.3
Nitab4.5_0007554g0020 Nicotiana tabacum HOM05D003968 ORTHO05D004077 2.1e-47 193.4 206 55.8
Prupe.1G219000 Prunus persica HOM05D003968 ORTHO05D004077 2.1e-47 193.4 226 51.3
TWI75G0242 Tripterygium wilfordii HOM05D003968 ORTHO05D004077 2.8e-47 193.0 210 57.1
arahy.Tifrunner.gnm1.ann1.GKU1A2 Arachis hypogaea HOM05D003968 ORTHO05D004077 8.1e-47 191.4 222 63.5
VMungo1383G2332 Vigna mungo HOM05D003968 ORTHO05D004077 8.1e-47 191.4 212 53.3
Glyma.18G302000 Glycine max HOM05D003968 ORTHO05D004077 1.1e-46 191.0 251 60.6
MD13G1126400 Malus domestica HOM05D003968 ORTHO05D004077 1.1e-46 191.0 218 61.0
TWI36G1280 Tripterygium wilfordii HOM05D003968 ORTHO05D004077 1.1e-46 191.0 216 50.5
arahy.Tifrunner.gnm1.ann1.25I2B1 Arachis hypogaea HOM05D003968 ORTHO05D004077 1.4e-46 190.7 215 64.2
MD16G1126900 Malus domestica HOM05D003968 ORTHO05D004077 4.0e-46 189.1 228 59.2
Peaxi162Scf00758g00054 Petunia axillaris HOM05D003968 ORTHO05D004077 5.2e-46 188.7 207 67.1
TAR629G0662 Trochodendron aralioides HOM05D003968 ORTHO05D004077 5.2e-46 188.7 205 57.6
Phvul.008G000400 Phaseolus vulgaris HOM05D003968 ORTHO05D004077 8.9e-46 188.0 214 53.7
FAN17G1317 Fragaria x ananassa HOM05D003968 ORTHO05D004077 1.2e-45 187.6 251 61.4
TWI18G0914 Tripterygium wilfordii HOM05D003968 ORTHO05D004077 1.2e-45 187.6 215 55.3
MSTRG.8041 Avicennia marina HOM05D003968 ORTHO05D004077 1.5e-45 187.2 199 55.8
Oeu003280.1 Olea europaea HOM05D003968 ORTHO05D004077 2.0e-45 186.8 207 50.2
CSS0048086 Camellia sinensis var. sinensis HOM05D003968 ORTHO05D004077 4.4e-45 185.7 210 70.0
Eucgr.H03380 Eucalyptus grandis HOM05D003968 ORTHO05D004077 4.4e-45 185.7 210 59.5
Actinidia30604 Actinidia chinensis HOM05D003968 ORTHO05D004077 2.2e-44 183.3 204 56.4
Nn3g16325 Nelumbo nucifera HOM05D003968 ORTHO05D004077 2.9e-44 183.0 200 58.5
THA.LOC104820530 Tarenaya hassleriana HOM05D003968 ORTHO05D004077 6.4e-44 181.8 206 55.3
Actinidia22131 Actinidia chinensis HOM05D003968 ORTHO05D004077 1.6e-42 177.2 204 63.7
Sed0024018 Sechium edule HOM05D003968 ORTHO05D004077 4.6e-42 175.6 204 67.2
Cpa.g.sc123.52 Carica papaya HOM05D003968 ORTHO05D004077 6.0e-42 175.3 220 52.7
HanXRQChr08g0210131 Helianthus annuus HOM05D003968 ORTHO05D004077 6.0e-42 175.3 209 64.6
Peaxi162Scf00128g01760 Petunia axillaris HOM05D003968 ORTHO05D004077 6.0e-42 175.3 202 50.0
THA.LOC104814203 Tarenaya hassleriana HOM05D003968 ORTHO05D004077 1.3e-41 174.1 204 51.5
CANSAT56G0023 Cannabis sativa HOM05D003968 ORTHO05D004077 3.9e-41 172.6 222 59.9
MSTRG.468 Avicennia marina HOM05D003968 ORTHO05D004077 5.1e-41 172.2 208 47.6
MBI07_g37482_MAGBIO Magnolia biondii HOM05D003968 ORTHO05D004077 5.1e-41 172.2 202 57.9
ECA233G5077 Erigeron canadensis HOM05D003968 ORTHO05D004077 8.6e-41 171.4 202 67.3
FAN07G1723 Fragaria x ananassa HOM05D003968 ORTHO05D004077 8.6e-41 171.4 243 56.8
Carub.0004s1514 Capsella rubella HOM05D003968 ORTHO05D004077 1.1e-40 171.0 203 62.1
Ah.02g131150 Amaranthus hybridus HOM05D003968 ORTHO05D004077 2.5e-40 169.9 227 48.0
ClCG07G011730 Citrullus lanatus HOM05D003968 ORTHO05D004077 4.3e-40 169.1 205 66.8
Lj1g0012774 Lotus japonicus HOM05D003968 ORTHO05D004077 4.3e-40 169.1 211 50.2
Nn4g22193 Nelumbo nucifera HOM05D003968 ORTHO05D004077 4.3e-40 169.1 199 54.3
Ah.03g135740 Amaranthus hybridus HOM05D003968 ORTHO05D004077 5.6e-40 168.7 236 55.9
CARHR127520 Cardamine hirsuta HOM05D003968 ORTHO05D004077 5.6e-40 168.7 205 59.0
SalBow2G1659 Salvia bowleyana HOM05D003968 ORTHO05D004077 9.5e-40 167.9 217 46.5
AL4G29180 Arabidopsis lyrata HOM05D003968 ORTHO05D004077 1.2e-39 167.5 204 58.8
Lsat_1_v5_gn_8_147160 Lactuca sativa HOM05D003968 ORTHO05D004077 1.6e-39 167.2 244 59.4
Lj6C835T0 Lonicera japonica HOM05D003968 ORTHO05D004077 1.6e-39 167.2 199 51.3
CSS0023603 Camellia sinensis var. sinensis HOM05D003968 ORTHO05D004077 2.1e-39 166.8 206 50.5
Thhalv10017284m.g Eutrema salsugineum HOM05D003968 ORTHO05D004077 2.1e-39 166.8 204 59.3
AT2G33510 Arabidopsis thaliana HOM05D003968 ORTHO05D004077 6.2e-39 165.2 204 61.8
Lalb_Chr04g0257091 Lupinus albus HOM05D003968 ORTHO05D004077 8.1e-39 164.9 199 65.8
Nitab4.5_0001600g0080 Nicotiana tabacum HOM05D003968 ORTHO05D004077 1.4e-38 164.1 206 51.9
Medtr7g005500 Medicago truncatula HOM05D003968 ORTHO05D004077 1.8e-38 163.7 212 57.1
Psat0s2399g0040 Pisum sativum HOM05D003968 ORTHO05D004077 1.2e-37 161.0 221 48.4
Lalb_Chr14g0375131 Lupinus albus HOM05D003968 ORTHO05D004077 2.0e-37 160.2 201 60.7
Aqoxy5G03211 Aquilegia oxysepala HOM05D003968 ORTHO05D004077 2.6e-37 159.8 199 65.3
BcaB02g10569 Brassica carinata HOM05D003968 ORTHO05D004077 4.4e-37 159.1 204 58.3
Migut.K01036 Erythranthe guttata HOM05D003968 ORTHO05D004077 5.8e-37 158.7 208 50.0
HanXRQChr12g0362341 Helianthus annuus HOM05D003968 ORTHO05D004077 5.8e-37 158.7 201 62.7
CDE06G0253 Ceratophyllum demersum HOM05D003968 ORTHO05D004077 1.3e-36 157.5 200 44.0
CDE02G3264 Ceratophyllum demersum HOM05D003278 ORTHO05D003738 2.2e-36 156.8 201 44.3
Cc11_g17440 Coffea canephora HOM05D003968 ORTHO05D004077 3.8e-36 156.0 236 54.7
BcaC02g07799 Brassica carinata HOM05D003968 ORTHO05D004077 4.9e-36 155.6 205 57.1
unitig_747.g21116 Utricularia gibba HOM05D003968 ORTHO05D004077 8.4e-36 154.8 208 43.8
A05p12030 Brassica napus HOM05D003968 ORTHO05D004077 1.1e-35 154.5 216 56.5
TPR.G15634 Trifolium pratense HOM05D003968 ORTHO05D004077 3.2e-35 152.9 198 65.2
BcaC02g11436 Brassica carinata HOM05D003968 ORTHO05D004077 4.1e-35 152.5 216 59.3
C04p15610 Brassica napus HOM05D003968 ORTHO05D004077 4.1e-35 152.5 216 59.3
BcaC01g05837 Brassica carinata HOM05D003968 ORTHO05D004077 5.4e-35 152.1 209 54.1
C04p63030 Brassica napus HOM05D003968 ORTHO05D004077 7.1e-35 151.8 205 55.1
Aa31LG9G13440 Aethionema arabicum HOM05D003968 ORTHO05D004077 9.2e-35 151.4 192 54.2
A04p25820 Brassica napus HOM05D003968 ORTHO05D004077 9.2e-35 151.4 205 56.1
Lsat_1_v5_gn_4_1260 Lactuca sativa HOM05D003968 ORTHO05D004077 1.2e-34 151.0 198 58.1
MELO3C022347.2 Cucumis melo HOM05D003968 ORTHO05D004077 1.6e-34 150.6 210 51.4
BraA03t11137Z Brassica rapa HOM05D003968 ORTHO05D004077 3.5e-34 149.4 201 55.2
CAN.G1277.6 Capsicum annuum HOM05D003968 ORTHO05D004077 3.5e-34 149.4 202 51.5
THA.LOC104812600 Tarenaya hassleriana HOM05D003968 ORTHO05D004077 3.5e-34 149.4 209 50.7
A03p18770 Brassica napus HOM05D003968 ORTHO05D004077 4.6e-34 149.1 201 55.2
BcaB01g03931 Brassica carinata HOM05D003968 ORTHO05D004077 6.0e-34 148.7 200 55.0
Sp4g15850 Schrenkiella parvula HOM05D003968 ORTHO05D004077 6.0e-34 148.7 208 53.4
CsaV3_6G007850 Cucumis sativus L. HOM05D003968 ORTHO05D004077 7.8e-34 148.3 210 53.3
C03p21930 Brassica napus HOM05D003968 ORTHO05D004077 1.0e-33 147.9 201 54.7
DCAR_024638 Daucus carota HOM05D003968 ORTHO05D004077 1.3e-33 147.5 237 52.3
Hund25497 Selenicereus undatus HOM05D003968 ORTHO05D004077 1.7e-33 147.1 211 48.3
ClCG06G001810 Citrullus lanatus HOM05D003968 ORTHO05D004077 5.1e-33 145.6 213 52.1
MBI11_g37080_MAGBIO Magnolia biondii HOM05D003968 ORTHO05D004077 6.6e-33 145.2 147 58.5
BcaB06g28694 Brassica carinata HOM05D003968 ORTHO05D004077 1.1e-32 144.4 209 49.8
CsaV3_4G002470 Cucumis sativus L. HOM05D003968 ORTHO05D004077 1.1e-32 144.4 210 57.6
Aa31sc415G10 Aethionema arabicum HOM05D003968 ORTHO05D004077 1.9e-32 143.7 208 50.0
PSO478G1150 Papaver somniferum HOM05D003968 ORTHO05D004077 3.3e-32 142.9 203 58.6
BolC4t27780H Brassica oleracea HOM05D003968 ORTHO05D004077 4.3e-32 142.5 218 51.8
BraA05t20145Z Brassica rapa HOM05D003968 ORTHO05D004077 5.6e-32 142.1 229 51.1
BraA08t34544Z Brassica rapa HOM05D003968 ORTHO05D004077 9.6e-32 141.4 202 46.0
Sp1g24250 Schrenkiella parvula HOM05D003968 ORTHO05D004077 1.6e-31 140.6 210 49.5
Thhalv10008849m.g Eutrema salsugineum HOM05D003968 ORTHO05D004077 2.1e-31 140.2 205 52.7
PSO017G3780 Papaver somniferum HOM05D003968 ORTHO05D004077 2.8e-31 139.8 201 57.7
MELO3C017796.2 Cucumis melo HOM05D003968 ORTHO05D004077 6.2e-31 138.7 219 58.9
BolC4t23129H Brassica oleracea HOM05D003968 ORTHO05D004077 8.1e-31 138.3 229 55.0
A07p11490 Brassica napus HOM05D003968 ORTHO05D004077 1.1e-30 137.9 197 40.1
BraA04t18084Z Brassica rapa HOM05D003968 ORTHO05D004077 1.1e-30 137.9 215 52.1
BraA07t28938Z Brassica rapa HOM05D003968 ORTHO05D004077 1.1e-30 137.9 197 40.1
A08p25930 Brassica napus HOM05D003968 ORTHO05D004077 1.8e-30 137.1 202 44.1
Carub.0001s2650 Capsella rubella HOM05D003968 ORTHO05D004077 1.8e-30 137.1 204 51.5
BcaB03g13960 Brassica carinata HOM05D003968 ORTHO05D004077 4.0e-30 136.0 205 39.5
Solyc01g009770.3 Solanum lycopersicum HOM05D003968 ORTHO05D004077 5.2e-30 135.6 207 43.0
Sopen01g005310 Solanum pennellii HOM05D003968 ORTHO05D004077 5.2e-30 135.6 217 42.9
TAR622G0782 Trochodendron aralioides HOM05D003968 ORTHO05D004077 5.2e-30 135.6 200 44.5
Sed0012192 Sechium edule HOM05D003968 ORTHO05D004077 6.9e-30 135.2 205 48.8
CARHR027520 Cardamine hirsuta HOM05D003968 ORTHO05D004077 2.0e-29 133.7 197 48.7
AT1G28070 Arabidopsis thaliana HOM05D003968 ORTHO05D004077 4.4e-29 132.5 199 50.8
C03p74720 Brassica napus HOM05D003968 ORTHO05D004077 2.2e-28 130.2 202 44.6
BolC3t19720H Brassica oleracea HOM05D003968 ORTHO05D004077 4.9e-28 129.0 202 44.1
Rhsim12G0020700 Rhododendron simsii HOM05D003968 ORTHO05D004077 6.4e-28 128.6 126 57.1
unitig_749.g13321 Utricularia gibba HOM05D003968 ORTHO05D004077 1.1e-27 127.9 204 39.7
BcaC01g00004 Brassica carinata HOM05D003968 ORTHO05D004077 1.4e-27 127.5 202 43.1
BcaC06g35328 Brassica carinata HOM05D003968 ORTHO05D004077 3.2e-27 126.3 197 38.6
C07p17340 Brassica napus HOM05D003968 ORTHO05D004077 3.2e-27 126.3 197 38.6
BolC7t42238H Brassica oleracea HOM05D003968 ORTHO05D004077 3.2e-27 126.3 197 38.6
Gorai.002G022000 Gossypium raimondii HOM05D003968 ORTHO05D004077 4.2e-27 125.9 199 58.8
PGSC0003DMG400030000 Solanum tuberosum HOM05D003968 ORTHO05D004077 7.1e-27 125.2 213 40.4
ATR0582G076 Amborella trichopoda HOM05D003968 ORTHO05D004077 9.3e-27 124.8 198 41.9
unitig_26.g10423 Utricularia gibba HOM05D003968 ORTHO05D004077 1.6e-26 124.0 182 40.1
Gohir.D01G019600 Gossypium hirsutum HOM05D003968 ORTHO05D004077 2.7e-26 123.2 199 58.3
Gohir.A01G021200 Gossypium hirsutum HOM05D003968 ORTHO05D004077 1.7e-25 120.6 199 57.8
BcaC05g26810 Brassica carinata HOM05D003968 ORTHO05D004077 8.7e-25 118.2 188 38.3
CSS0031909 Camellia sinensis var. sinensis HOM05D003968 ORTHO05D004077 1.1e-24 117.9 235 40.0
PSO675G4434 Papaver somniferum HOM05D003968 ORTHO05D004077 2.1e-23 113.6 196 43.4
PSO229G0040 Papaver somniferum HOM05D003968 ORTHO05D004077 2.8e-23 113.2 200 41.5
Oeu019428.1 Olea europaea HOM05D003968 ORTHO05D004077 9.0e-22 108.2 204 36.3
SGA_v2.0_scaffold80G25944 Striga asiatica HOM05D003968 ORTHO05D004077 2.0e-21 107.1 116 51.7
A09p38020 Brassica napus HOM05D003968 ORTHO05D004077 1.4e-19 100.9 188 43.6
BraA09t39312Z Brassica rapa HOM05D003968 ORTHO05D004077 1.4e-19 100.9 188 43.6
HPP92_023087 Vanilla planifolia HOM05D003968 ORTHO05D004077 1.4e-19 100.9 219 41.1
BcaC05g26624 Brassica carinata HOM05D003968 ORTHO05D004077 1.9e-19 100.5 188 44.7
C05p26740 Brassica napus HOM05D003968 ORTHO05D004077 1.9e-19 100.5 188 44.7
HPP92_006446 Vanilla planifolia HOM05D003968 ORTHO05D004077 1.6e-15 87.4 226 36.3
HPP92_011550 Vanilla planifolia HOM05D003968 ORTHO05D004077 2.8e-15 86.7 221 35.7
BolC5t31398H Brassica oleracea HOM05D003968 ORTHO05D004077 1.1e-14 84.7 149 45.6
MBI01_g34379_MAGBIO Magnolia biondii HOM05D003968 ORTHO05D004077 1.1e-14 84.7 129 42.6
Os02g0516400 Oryza sativa ssp. japonica HOM05D003968 ORTHO05D004077 4.5e-13 79.3 105 41.0
BcaC05g26622 Brassica carinata HOM05D003968 ORTHO05D004077 1.6e-10 70.9 44 65.9
CDE09G1092 Ceratophyllum demersum HOM05D003968 ORTHO05D004077 3.5e-10 69.7 201 26.9
AL1G41580 Arabidopsis lyrata HOM05D003968 ORTHO05D004077 1.8e-09 67.4 39 71.8
Atru.chr1.737 Acer truncatum HOM05D003968 ORTHO05D004077 1.1e-08 64.7 29 96.6
CDE02G1122 Ceratophyllum demersum HOM05D003968 ORTHO05D004077 1.9e-08 63.9 161 26.7
Lalb_Chr22g0349911 Lupinus albus HOM05D003968 ORTHO05D004077 4.3e-08 62.8 71 50.7
SMO347G0048 Selaginella moellendorffii HOM05D022619 ORTHO05D026045 5.6e-08 62.4 157 49.7
SEGI_36735 Sequoiadendron giganteum HOM05D012184 ORTHO05D004077 2.8e-07 60.1 134 28.4
SMO347G0423 Selaginella moellendorffii HOM05D013579 ORTHO05D004077 5.3e-06 55.8 86 37.2


User provided reference genes

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