Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib251G0280 Durio zibethinus HOM05D007398 ORTHO05D004912 5.2e-60 234.2 119 100.0
Duzib248G0799 Durio zibethinus HOM05D007398 ORTHO05D004912 8.4e-50 200.3 119 84.0
Thecc.02G314700 Theobroma cacao HOM05D007398 ORTHO05D004912 4.2e-49 198.0 119 84.0
Gorai.008G173500 Gossypium raimondii HOM05D007398 ORTHO05D004912 2.7e-48 195.3 119 82.4
Gohir.A12G157600 Gossypium hirsutum HOM05D007398 ORTHO05D004912 1.3e-47 193.0 119 80.7
Gohir.D12G159800 Gossypium hirsutum HOM05D007398 ORTHO05D004912 2.5e-46 188.7 119 80.7
COL.COLO4_27711 Corchorus olitorius HOM05D007398 ORTHO05D004912 1.1e-44 183.3 120 78.3
Gohir.A04G144600 Gossypium hirsutum HOM05D007398 ORTHO05D004912 2.1e-40 169.1 119 73.9
Gorai.012G184400 Gossypium raimondii HOM05D007398 ORTHO05D004912 3.0e-39 165.2 119 73.1
Gohir.D04G189100 Gossypium hirsutum HOM05D007398 ORTHO05D004912 5.1e-39 164.5 119 73.1
Ciclev10017196m.g Citrus clementina HOM05D007398 ORTHO05D004912 1.2e-27 126.7 120 58.3
CANSAT64G0797 Cannabis sativa HOM05D007398 ORTHO05D004912 2.6e-27 125.6 122 59.0
Atru.chr6.3183 Acer truncatum HOM05D007398 ORTHO05D004912 1.3e-26 123.2 127 55.1
RcHm_v2.0_Chr2g0159281 Rosa chinensis HOM05D007398 ORTHO05D004912 1.3e-26 123.2 123 56.1
Atru.chr6.3184 Acer truncatum HOM05D007398 ORTHO05D004912 2.2e-26 122.5 127 55.1
Prupe.3G217200 Prunus persica HOM05D007398 ORTHO05D004912 2.2e-26 122.5 124 56.5
FAN02G4350 Fragaria x ananassa HOM05D007398 ORTHO05D004912 6.5e-26 120.9 124 55.6
FAN05G1963 Fragaria x ananassa HOM05D007398 ORTHO05D004912 4.2e-25 118.2 124 54.8
FAN14G0586 Fragaria x ananassa HOM05D007398 ORTHO05D004912 7.2e-25 117.5 124 54.8
FvH4_6g43180 Fragaria vesca HOM05D007398 ORTHO05D004912 9.3e-25 117.1 124 54.8
FAN10G4171 Fragaria x ananassa HOM05D007398 ORTHO05D004912 9.3e-25 117.1 124 54.8
MD17G1096900 Malus domestica HOM05D007398 ORTHO05D004912 3.5e-24 115.2 124 52.4
CiPaw.03G160000 Carya illinoinensis HOM05D007398 ORTHO05D004912 4.6e-24 114.8 134 50.7
Actinidia30523 Actinidia chinensis HOM05D007398 ORTHO05D004912 1.0e-23 113.6 121 55.4
FAN09G1954 Fragaria x ananassa HOM05D007398 ORTHO05D004912 1.0e-23 113.6 124 53.2
TWI18G0787 Tripterygium wilfordii HOM05D007398 ORTHO05D004912 1.0e-23 113.6 126 53.2
Hma1.2p1_0328F.1_g126925 Hydrangea macrophylla HOM05D007398 ORTHO05D004912 2.3e-23 112.5 129 55.0
Hma1.2p1_0328F.1_g126930 Hydrangea macrophylla HOM05D007398 ORTHO05D004912 2.3e-23 112.5 129 55.0
MD09G1108900 Malus domestica HOM05D007398 ORTHO05D004912 3.0e-23 112.1 123 52.8
TWI75G1275 Tripterygium wilfordii HOM05D007398 ORTHO05D004912 6.7e-23 110.9 123 53.7
Cfa014400 Carpinus fangiana HOM05D007398 ORTHO05D004912 1.9e-22 109.4 136 52.9
CSS0017183 Camellia sinensis var. sinensis HOM05D007398 ORTHO05D004912 2.5e-22 109.0 123 52.8
Haze_12865 Corylus avellana HOM05D007398 ORTHO05D004912 4.3e-22 108.2 138 52.9
QL08p033081 Quercus lobata HOM05D007398 ORTHO05D004912 2.2e-21 105.9 139 47.5
TAR626G0532 Trochodendron aralioides HOM05D007398 ORTHO05D004912 1.1e-20 103.6 131 48.1
Manes.13G070200 Manihot esculenta HOM05D007398 ORTHO05D004912 9.0e-20 100.5 93 59.1
Actinidia03605 Actinidia chinensis HOM05D007398 ORTHO05D004912 1.2e-19 100.1 105 56.2
TAR627G0987 Trochodendron aralioides HOM05D007398 ORTHO05D004912 1.0e-18 97.1 130 47.7
Glyma.13G308800 Glycine max HOM05D007398 ORTHO05D004912 1.3e-18 96.7 123 52.8
Nn1g03511 Nelumbo nucifera HOM05D007398 ORTHO05D004912 1.3e-18 96.7 126 49.2
TAR629G1636 Trochodendron aralioides HOM05D007398 ORTHO05D004912 1.7e-18 96.3 131 46.6
Dinv39711 Davidia involucrata HOM05D007398 ORTHO05D004912 2.2e-18 95.9 124 50.0
Rhsim06G0162600 Rhododendron simsii HOM05D007398 ORTHO05D004912 1.1e-17 93.6 117 46.2
Ca_01601_v3 Cicer arietinum L. HOM05D007398 ORTHO05D004912 3.2e-17 92.0 106 53.8
QL07p015665 Quercus lobata HOM05D007398 ORTHO05D004912 4.2e-17 91.7 131 47.3
VMungo1080G0246 Vigna mungo HOM05D007398 ORTHO05D004912 1.6e-16 89.7 123 50.4
TPR.G4189 Trifolium pratense HOM05D007398 ORTHO05D004912 7.9e-16 87.4 101 50.5
Psat5g264000 Pisum sativum HOM05D007398 ORTHO05D004912 1.0e-15 87.0 101 52.5
arahy.Tifrunner.gnm1.ann1.TIC55L Arachis hypogaea HOM05D007398 ORTHO05D004912 1.4e-15 86.7 133 46.6
Glyma.12G193700 Glycine max HOM05D007398 ORTHO05D004912 1.8e-15 86.3 125 48.0
Phvul.005G115200 Phaseolus vulgaris HOM05D007398 ORTHO05D004912 1.8e-15 86.3 128 46.9
Medtr2g088320 Medicago truncatula HOM05D007398 ORTHO05D004912 3.0e-15 85.5 99 50.5
Eucgr.K00797 Eucalyptus grandis HOM05D007398 ORTHO05D004912 8.8e-15 84.0 120 50.0
Sed0010410 Sechium edule HOM05D007398 ORTHO05D004912 8.8e-15 84.0 128 43.8
Lalb_Chr19g0135871 Lupinus albus HOM05D007398 ORTHO05D004912 1.1e-14 83.6 116 45.7
ClCG00G003290 Citrullus lanatus HOM05D007398 ORTHO05D004912 1.5e-14 83.2 126 45.2
ClCG02G001930 Citrullus lanatus HOM05D007398 ORTHO05D004912 1.5e-14 83.2 126 45.2
Sed0017095 Sechium edule HOM05D007398 ORTHO05D004912 1.5e-14 83.2 127 42.5
Cc05_g04620 Coffea canephora HOM05D007398 ORTHO05D004912 2.0e-14 82.8 117 51.3
ClCG02G008700 Citrullus lanatus HOM05D007398 ORTHO05D004912 9.7e-14 80.5 128 43.8
arahy.Tifrunner.gnm1.ann1.X0QM4L Arachis hypogaea HOM05D007398 ORTHO05D004912 1.3e-13 80.1 133 45.1
Lsat_1_v5_gn_7_92201 Lactuca sativa HOM05D007398 ORTHO05D004912 1.7e-13 79.7 142 42.3
ECA236G3422 Erigeron canadensis HOM05D007398 ORTHO05D004912 2.2e-13 79.3 129 40.3
Sed0017131 Sechium edule HOM05D007398 ORTHO05D004912 2.8e-13 79.0 124 46.8
Manes.15G071300 Manihot esculenta HOM05D007398 ORTHO05D004912 4.8e-13 78.2 86 52.3
Oeu041920.1 Olea europaea HOM05D007398 ORTHO05D004912 6.3e-13 77.8 127 48.0
MELO3C018817.2 Cucumis melo HOM05D007398 ORTHO05D004912 8.2e-13 77.4 121 45.5
CsaV3_7G003580 Cucumis sativus L. HOM05D007398 ORTHO05D004912 1.1e-12 77.0 120 45.0
HanXRQChr16g0504931 Helianthus annuus HOM05D007398 ORTHO05D004912 4.1e-12 75.1 110 47.3
HanXRQChr03g0069481 Helianthus annuus HOM05D007398 ORTHO05D004912 1.2e-11 73.6 127 43.3
Aqoxy1G02145 Aquilegia oxysepala HOM05D007398 ORTHO05D004912 1.5e-11 73.2 127 39.4
Lalb_Chr24g0393181 Lupinus albus HOM05D007398 ORTHO05D004912 1.5e-11 73.2 112 45.5
Sed0025347 Sechium edule HOM05D007398 ORTHO05D004912 1.5e-11 73.2 128 42.2
MBI02_g21879_MAGBIO Magnolia biondii HOM05D007398 ORTHO05D004912 2.6e-11 72.4 108 45.4
QL05p073125 Quercus lobata HOM05D007398 ORTHO05D004912 3.4e-11 72.0 95 49.5
PSO541G0095 Papaver somniferum HOM05D007398 ORTHO05D004912 1.7e-10 69.7 139 38.1
QL05p073115 Quercus lobata HOM05D007398 ORTHO05D004912 2.9e-10 68.9 94 50.0
Manes.03G130000 Manihot esculenta HOM05D007398 ORTHO05D004912 5.0e-10 68.2 98 40.8
Thecc.07G035100 Theobroma cacao HOM05D007398 ORTHO05D004912 5.0e-10 68.2 94 45.7
CDE01G0169 Ceratophyllum demersum HOM05D001264 ORTHO05D001167 1.9e-09 66.2 95 46.3
Lsat_1_v5_gn_9_106500 Lactuca sativa HOM05D007398 ORTHO05D004912 3.2e-09 65.5 139 38.8
MSTRG.7209 Avicennia marina HOM05D011575 ORTHO05D004912 7.2e-09 64.3 113 44.2
Duzib213G1052 Durio zibethinus HOM05D007398 ORTHO05D004912 2.1e-08 62.8 94 44.7
Gohir.D01G067500 Gossypium hirsutum HOM05D007398 ORTHO05D004912 2.1e-08 62.8 99 43.4
Gorai.002G089400 Gossypium raimondii HOM05D007398 ORTHO05D004912 2.1e-08 62.8 99 43.4
unitig_0.g942 Utricularia gibba HOM05D011575 ORTHO05D004912 2.7e-08 62.4 97 43.3
Gohir.A01G080300 Gossypium hirsutum HOM05D007398 ORTHO05D004912 3.6e-08 62.0 99 43.4
PGR083G1220 Punica granatum HOM05D007398 ORTHO05D004912 3.6e-08 62.0 99 44.4
VMungo0647G2151 Vigna mungo HOM05D011727 ORTHO05D004912 3.6e-08 62.0 83 45.8
Zm00001eb273730 Zea mays HOM05D007398 ORTHO05D004912 3.6e-08 62.0 118 41.5
Migut.M01320 Erythranthe guttata HOM05D011575 ORTHO05D004912 6.1e-08 61.2 109 41.3
SGA_v2.0_scaffold4G01914 Striga asiatica HOM05D011575 ORTHO05D004912 6.1e-08 61.2 108 45.4
THA.LOC104813425 Tarenaya hassleriana HOM05D009587 ORTHO05D004912 7.9e-08 60.8 89 39.3
ClCG03G014620 Citrullus lanatus HOM05D032147 ORTHO05D034646 1.4e-07 60.1 110 39.1
Potri.006G052300 Populus trichocarpa HOM05D007398 ORTHO05D004912 1.4e-07 60.1 95 40.0
SEGI_01426 Sequoiadendron giganteum HOM05D007398 ORTHO05D004912 1.4e-07 60.1 128 41.4
Cpa.g.sc12.298 Carica papaya HOM05D007398 ORTHO05D004912 1.8e-07 59.7 105 40.0
Migut.H01572 Erythranthe guttata HOM05D011575 ORTHO05D004912 1.8e-07 59.7 92 44.6
Glyma.14G163600 Glycine max HOM05D011727 ORTHO05D004912 3.0e-07 58.9 96 43.8
Lj1g0009560 Lotus japonicus HOM05D011727 ORTHO05D004912 3.0e-07 58.9 78 51.3
SGA_v2.0_scaffold7G03838 Striga asiatica HOM05D011575 ORTHO05D004912 3.0e-07 58.9 111 44.1
Sc16g0005970 Simmondsia chinensis HOM05D007398 ORTHO05D004912 3.9e-07 58.5 104 42.3
unitig_744.g24521 Utricularia gibba HOM05D011575 ORTHO05D004912 5.1e-07 58.2 80 46.2
SalBow8G3401 Salvia bowleyana HOM05D011575 ORTHO05D004912 8.8e-07 57.4 81 46.9
ATR0794G061 Amborella trichopoda HOM05D007398 ORTHO05D004912 1.1e-06 57.0 134 35.1
Zm00001eb070220 Zea mays HOM05D007398 ORTHO05D004912 1.1e-06 57.0 119 33.6
BcaC01g06332 Brassica carinata HOM05D009587 ORTHO05D004912 1.5e-06 56.6 105 35.2
Thhalv10015018m.g Eutrema salsugineum HOM05D009587 ORTHO05D004912 1.5e-06 56.6 125 34.4
Phvul.008G166200 Phaseolus vulgaris HOM05D011727 ORTHO05D004912 1.5e-06 56.6 83 41.0
ECA240G1365 Erigeron canadensis HOM05D007398 ORTHO05D004912 2.0e-06 56.2 99 43.4
Lj4g0016348 Lotus japonicus HOM05D007398 ORTHO05D004912 2.0e-06 56.2 94 38.3
AT5G54970 Arabidopsis thaliana HOM05D009587 ORTHO05D004912 4.4e-06 55.1 111 36.9
Oeu002741.1 Olea europaea HOM05D011575 ORTHO05D004912 5.7e-06 54.7 110 36.4
Ah.04g165930 Amaranthus hybridus HOM05D007398 ORTHO05D004912 7.4e-06 54.3 103 41.7
Glyma.13G082350 Glycine max HOM05D011727 ORTHO05D004912 7.4e-06 54.3 86 39.5
RcHm_v2.0_Chr5g0002951 Rosa chinensis HOM05D011727 ORTHO05D004912 7.4e-06 54.3 84 40.5
THA.LOC104817668 Tarenaya hassleriana HOM05D009587 ORTHO05D004912 7.4e-06 54.3 95 43.2
PGSC0003DMG400016451 Solanum tuberosum HOM05D011575 ORTHO05D004912 9.7e-06 53.9 86 45.3
Zm00001eb431260 Zea mays HOM05D007398 ORTHO05D004912 9.7e-06 53.9 111 34.2


User provided reference genes

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