Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib248G1531 Durio zibethinus HOM05D006149 ORTHO05D007341 1.2e-62 243.4 165 100.0
COL.COLO4_32597 Corchorus olitorius HOM05D006149 ORTHO05D007341 8.9e-42 174.1 173 74.0
Gohir.A03G186300 Gossypium hirsutum HOM05D006149 ORTHO05D007341 2.6e-41 172.6 125 77.6
Thecc.02G107700 Theobroma cacao HOM05D006149 ORTHO05D007341 2.6e-41 172.6 125 78.4
Gohir.D02G207100 Gossypium hirsutum HOM05D006149 ORTHO05D007341 2.9e-40 169.1 123 77.2
Gorai.005G235000 Gossypium raimondii HOM05D006149 ORTHO05D007341 2.9e-40 169.1 123 77.2
Duzib052G0317 Durio zibethinus HOM05D006149 ORTHO05D007341 4.1e-39 165.2 173 75.7
Manes.10G076500 Manihot esculenta HOM05D006149 ORTHO05D007341 5.6e-36 154.8 125 74.4
VMungo0720G1566 Vigna mungo HOM05D006149 ORTHO05D007341 6.9e-34 147.9 130 69.2
TWI34G0529 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 5.8e-33 144.8 132 68.9
Ca_11076_v3 Cicer arietinum L. HOM05D006149 ORTHO05D007341 7.6e-33 144.4 127 66.9
Phvul.007G040000 Phaseolus vulgaris HOM05D006149 ORTHO05D007341 2.2e-32 142.9 127 68.5
TWI32G0763 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 4.9e-32 141.7 128 68.0
Medtr1g107435 Medicago truncatula HOM05D006149 ORTHO05D007341 1.9e-31 139.8 125 69.6
Glyma.20G128800 Glycine max HOM05D006149 ORTHO05D007341 3.2e-31 139.0 127 67.7
Cpa.g.sc76.22 Carica papaya HOM05D006149 ORTHO05D007341 5.4e-31 138.3 135 64.4
Dinv15763 Davidia involucrata HOM05D006149 ORTHO05D007341 7.1e-31 137.9 134 63.4
Nn4g25119 Nelumbo nucifera HOM05D006149 ORTHO05D007341 7.1e-31 137.9 124 66.1
Lj5g0003815 Lotus japonicus HOM05D006149 ORTHO05D007341 1.2e-30 137.1 127 65.4
Nn1g04703 Nelumbo nucifera HOM05D006149 ORTHO05D007341 1.2e-30 137.1 120 70.0
Ciclev10029393m.g Citrus clementina HOM05D006149 ORTHO05D007341 1.6e-30 136.7 121 67.8
PGR142G0815 Punica granatum HOM05D006149 ORTHO05D007341 1.6e-30 136.7 129 65.9
MD05G1089500 Malus domestica HOM05D006149 ORTHO05D007341 2.7e-30 136.0 131 62.6
Psat6g219120 Pisum sativum HOM05D006149 ORTHO05D007341 4.6e-30 135.2 121 68.6
Sabra09G0073900 Salix brachista HOM05D006149 ORTHO05D007341 4.6e-30 135.2 128 65.6
unitig_22.g5723 Utricularia gibba HOM05D006149 ORTHO05D007341 6.0e-30 134.8 131 63.4
arahy.Tifrunner.gnm1.ann1.0F7AFP Arachis hypogaea HOM05D006149 ORTHO05D007341 7.8e-30 134.4 128 67.2
Dinv42191 Davidia involucrata HOM05D006149 ORTHO05D007341 7.8e-30 134.4 130 63.8
Cfa004575 Carpinus fangiana HOM05D006149 ORTHO05D007341 1.3e-29 133.7 127 63.8
arahy.Tifrunner.gnm1.ann1.GUMB1Z Arachis hypogaea HOM05D006149 ORTHO05D007341 2.3e-29 132.9 128 66.4
Lj9A321G81 Lonicera japonica HOM05D006149 ORTHO05D007341 1.5e-28 130.2 123 62.6
Nitab4.5_0002815g0010 Nicotiana tabacum HOM05D006149 ORTHO05D007341 1.5e-28 130.2 114 66.7
Potri.001G300300 Populus trichocarpa HOM05D006149 ORTHO05D007341 1.9e-28 129.8 125 64.8
Glyma.10G262200 Glycine max HOM05D006149 ORTHO05D007341 2.5e-28 129.4 121 65.3
RcHm_v2.0_Chr6g0255351 Rosa chinensis HOM05D006149 ORTHO05D007341 2.5e-28 129.4 124 62.9
THA.LOC104807242 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 2.5e-28 129.4 125 60.0
AUR62039082 Chenopodium quinoa HOM05D006149 ORTHO05D007341 4.3e-28 128.6 124 60.5
Nitab4.5_0005392g0090 Nicotiana tabacum HOM05D006149 ORTHO05D007341 7.3e-28 127.9 114 64.9
Lsat_1_v5_gn_9_111221 Lactuca sativa HOM05D006149 ORTHO05D007341 1.6e-27 126.7 132 59.8
Prupe.8G134800 Prunus persica HOM05D006149 ORTHO05D007341 2.8e-27 125.9 111 67.6
Hund06318 Selenicereus undatus HOM05D006149 ORTHO05D007341 6.2e-27 124.8 129 58.9
FAN20G0990 Fragaria x ananassa HOM05D006149 ORTHO05D007341 8.1e-27 124.4 124 61.3
CANSAT25G3711 Cannabis sativa HOM05D006149 ORTHO05D007341 1.1e-26 124.0 124 62.9
vmacro19450 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 1.1e-26 124.0 133 59.4
Sopen01g049800 Solanum pennellii HOM05D006149 ORTHO05D007341 1.4e-26 123.6 113 61.9
PGSC0003DMG400025768 Solanum tuberosum HOM05D006149 ORTHO05D007341 1.4e-26 123.6 113 61.9
HanXRQChr03g0070291 Helianthus annuus HOM05D006149 ORTHO05D007341 1.8e-26 123.2 138 58.7
Solyc01g107610.4 Solanum lycopersicum HOM05D006149 ORTHO05D007341 1.8e-26 123.2 113 62.8
CsaV3_3G018210 Cucumis sativus L. HOM05D006149 ORTHO05D007341 2.4e-26 122.9 133 58.6
TAR628G0594 Trochodendron aralioides HOM05D006149 ORTHO05D007341 2.4e-26 122.9 122 60.7
MELO3C019546.2 Cucumis melo HOM05D006149 ORTHO05D007341 3.1e-26 122.5 133 58.6
ECA240G2462 Erigeron canadensis HOM05D006149 ORTHO05D007341 5.3e-26 121.7 106 69.8
Sed0001717 Sechium edule HOM05D006149 ORTHO05D007341 5.3e-26 121.7 131 60.3
Sc08g0001390 Simmondsia chinensis HOM05D006149 ORTHO05D007341 5.3e-26 121.7 124 62.9
CAN.G1231.7 Capsicum annuum HOM05D006149 ORTHO05D007341 9.0e-26 120.9 115 64.3
CDE02G2507 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 9.0e-26 120.9 115 67.0
CDE02G4185 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 9.0e-26 120.9 115 67.0
Actinidia27971 Actinidia chinensis HOM05D006149 ORTHO05D007341 1.5e-25 120.2 128 60.9
FvH4_2g05220 Fragaria vesca HOM05D006149 ORTHO05D007341 1.5e-25 120.2 124 58.9
FAN15G1894 Fragaria x ananassa HOM05D006149 ORTHO05D007341 1.5e-25 120.2 124 58.9
FAN24G0478 Fragaria x ananassa HOM05D000289 ORTHO05D007341 1.5e-25 120.2 124 58.9
Rhsim05G0088300 Rhododendron simsii HOM05D006149 ORTHO05D007341 1.5e-25 120.2 134 59.7
Oeu017469.1 Olea europaea HOM05D006149 ORTHO05D007341 2.0e-25 119.8 163 69.3
MD05G1088900 Malus domestica HOM05D006149 ORTHO05D007341 2.6e-25 119.4 189 45.5
SGA_v2.0_scaffold225G43080 Striga asiatica HOM05D006149 ORTHO05D007341 2.6e-25 119.4 122 61.5
SHI05287 Sapria himalayana HOM05D006149 ORTHO05D007341 3.4e-25 119.0 127 59.1
FAN27G1351 Fragaria x ananassa HOM05D000289 ORTHO05D007341 4.5e-25 118.6 124 58.1
CSS0036049 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 7.6e-25 117.9 127 61.4
Sp3g28510 Schrenkiella parvula HOM05D006149 ORTHO05D007341 7.6e-25 117.9 130 56.9
Lalb_Chr21g0308351 Lupinus albus HOM05D006149 ORTHO05D007341 1.3e-24 117.1 122 62.3
Thhalv10022867m.g Eutrema salsugineum HOM05D006149 ORTHO05D007341 1.7e-24 116.7 130 56.2
BcaC06g36046 Brassica carinata HOM05D006149 ORTHO05D007341 2.9e-24 115.9 128 58.6
BcaB03g16271 Brassica carinata HOM05D006149 ORTHO05D007341 3.8e-24 115.5 127 57.5
BcaC04g22139 Brassica carinata HOM05D006149 ORTHO05D007341 3.8e-24 115.5 128 57.8
C07p08530 Brassica napus HOM05D006149 ORTHO05D007341 3.8e-24 115.5 128 57.8
BolC7t41265H Brassica oleracea HOM05D006149 ORTHO05D007341 3.8e-24 115.5 128 57.8
ClCG05G010280 Citrullus lanatus HOM05D006149 ORTHO05D007341 3.8e-24 115.5 126 58.7
ATR0618G054 Amborella trichopoda HOM05D006149 ORTHO05D007341 6.4e-24 114.8 114 62.3
AL3G46990 Arabidopsis lyrata HOM05D006149 ORTHO05D007341 6.4e-24 114.8 131 57.3
BcaB08g34585 Brassica carinata HOM05D006149 ORTHO05D007341 6.4e-24 114.8 130 56.2
CARHR105640 Cardamine hirsuta HOM05D006149 ORTHO05D007341 8.4e-24 114.4 124 59.7
MSTRG.16714 Avicennia marina HOM05D006149 ORTHO05D007341 1.1e-23 114.0 136 56.6
Migut.B00388 Erythranthe guttata HOM05D006149 ORTHO05D007341 1.1e-23 114.0 129 56.6
Sed0008540 Sechium edule HOM05D006149 ORTHO05D007341 1.1e-23 114.0 127 59.1
Carub.0003s2910 Capsella rubella HOM05D006149 ORTHO05D007341 1.4e-23 113.6 122 59.0
HPP92_004777 Vanilla planifolia HOM05D006149 ORTHO05D007341 2.4e-23 112.8 99 69.7
SalBow6G4084 Salvia bowleyana HOM05D006149 ORTHO05D007341 4.2e-23 112.1 133 55.6
QL11p033743 Quercus lobata HOM05D006149 ORTHO05D007341 5.4e-23 111.7 159 49.7
AT2G15270 Arabidopsis thaliana HOM05D006149 ORTHO05D007341 7.1e-23 111.3 123 57.7
Rhsim11G0160200 Rhododendron simsii HOM05D006149 ORTHO05D007341 7.1e-23 111.3 187 45.5
Aa31LG8G13110 Aethionema arabicum HOM05D006149 ORTHO05D007341 1.6e-22 110.2 134 52.2
PSO675G5876 Papaver somniferum HOM05D006149 ORTHO05D007341 1.6e-22 110.2 122 54.1
Eucgr.E02957 Eucalyptus grandis HOM05D006149 ORTHO05D007341 2.1e-22 109.8 125 56.8
Peaxi162Scf00016g02334 Petunia axillaris HOM05D006149 ORTHO05D007341 2.1e-22 109.8 124 60.5
Sabra16G0188500 Salix brachista HOM05D006149 ORTHO05D007341 2.1e-22 109.8 167 47.9
CDE04G1609 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 2.7e-22 109.4 123 61.8
Os09g0104300 Oryza sativa ssp. japonica HOM05D006149 ORTHO05D007341 3.5e-22 109.0 88 72.7
PSO541G1364 Papaver somniferum HOM05D006149 ORTHO05D007341 7.9e-22 107.8 120 55.0
THA.LOC104819555 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 1.8e-21 106.7 82 74.4
AUR62010304 Chenopodium quinoa HOM05D006149 ORTHO05D007341 3.0e-21 105.9 102 59.8
CiPaw.05G011400 Carya illinoinensis HOM05D006149 ORTHO05D007341 5.1e-21 105.1 112 58.9
A07p05350 Brassica napus HOM05D006149 ORTHO05D007341 1.1e-20 104.0 128 53.1
BraA07t28328Z Brassica rapa HOM05D006149 ORTHO05D007341 1.1e-20 104.0 128 53.1
Aqoxy3G02908 Aquilegia oxysepala HOM05D006149 ORTHO05D007341 1.5e-20 103.6 125 56.0
SEGI_00829 Sequoiadendron giganteum HOM05D006149 ORTHO05D007341 7.4e-20 101.3 110 58.2
Zm00001eb393310 Zea mays HOM05D006149 ORTHO05D007341 9.6e-20 100.9 78 74.4
Zm00001eb020500 Zea mays HOM05D006149 ORTHO05D007341 8.1e-19 97.8 77 72.7
Pp3c2_21780 Physcomitrium patens HOM05D006149 ORTHO05D007341 2.4e-18 96.3 140 53.6
vmacro02004 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 3.1e-18 95.9 163 45.4
SMO364G0740 Selaginella moellendorffii HOM05D006149 ORTHO05D007341 4.0e-18 95.5 96 59.4
AagrBONN_evm.TU.Sc2ySwM_228.2976 Anthoceros agrestis HOM05D006149 ORTHO05D007341 6.9e-18 94.7 119 52.1
EL10Ac9g22279 Beta vulgaris HOM05D006149 ORTHO05D007341 3.4e-17 92.4 121 46.3
Ciclev10006213m.g Citrus clementina HOM05D006149 ORTHO05D007341 1.7e-16 90.1 107 54.2
DCAR_001643 Daucus carota HOM05D006149 ORTHO05D007341 3.8e-16 89.0 96 58.3
CANSAT25G0333 Cannabis sativa HOM05D006149 ORTHO05D007341 8.4e-16 87.8 112 52.7
HanXRQChr02g0033021 Helianthus annuus HOM05D006149 ORTHO05D007341 1.1e-15 87.4 116 54.3
CBR_g44544 Chara braunii HOM05D006149 ORTHO05D007341 9.3e-15 84.3 126 49.2
Pp3c1_15220 Physcomitrium patens HOM05D006149 ORTHO05D007341 1.2e-14 84.0 95 60.0
PGR042G0697 Punica granatum HOM05D006149 ORTHO05D007341 1.6e-14 83.6 85 62.4
Mapoly0056s0071 Marchantia polymorpha HOM05D006149 ORTHO05D007341 2.5e-12 76.3 110 50.0
Haze_10168 Corylus avellana HOM05D006149 ORTHO05D007341 4.0e-10 68.9 249 29.7
QL11p033903 Quercus lobata HOM05D006149 ORTHO05D007341 4.0e-10 68.9 46 80.4
Actinidia05494 Actinidia chinensis HOM05D006149 ORTHO05D007341 5.8e-09 65.1 88 50.0
Cre03.g193150 Chlamydomonas reinhardtii HOM05D006149 ORTHO05D007341 8.4e-08 61.2 104 43.3
Ah.01g018230 Amaranthus hybridus HOM05D006149 ORTHO05D007341 1.1e-07 60.8 118 42.4
CSS0028016 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 5.5e-07 58.5 89 50.6
TAR376G0787 Trochodendron aralioides HOM05D006149 ORTHO05D007341 4.6e-06 55.5 76 50.0


User provided reference genes

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