Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib248G0675 Durio zibethinus HOM05D004388 ORTHO05D005106 1.1e-93 346.7 182 100.0
Duzib052G1120 Durio zibethinus HOM05D004388 ORTHO05D005106 6.0e-47 191.4 118 88.1
Gohir.D01G173000 Gossypium hirsutum HOM05D004388 ORTHO05D005106 1.0e-46 190.7 118 87.3
Gorai.002G214600 Gossypium raimondii HOM05D004388 ORTHO05D005106 1.3e-46 190.3 118 86.4
Gohir.A01G181900 Gossypium hirsutum HOM05D004388 ORTHO05D005106 8.6e-46 187.6 119 83.2
Duzib248G0127 Durio zibethinus HOM05D004388 ORTHO05D005106 7.3e-45 184.5 118 86.4
Duzib132G0841 Durio zibethinus HOM05D004388 ORTHO05D005106 1.6e-44 183.3 122 82.0
Duzib248G1645 Durio zibethinus HOM05D004388 ORTHO05D005106 2.3e-43 179.5 118 83.9
Thecc.02G028000 Theobroma cacao HOM05D004388 ORTHO05D005106 6.8e-43 177.9 118 84.7
Potri.009G108700 Populus trichocarpa HOM05D004388 ORTHO05D005106 1.3e-41 173.7 115 79.1
Gohir.A03G214500 Gossypium hirsutum HOM05D004388 ORTHO05D005106 7.1e-40 167.9 116 78.4
Gorai.005G264100 Gossypium raimondii HOM05D004388 ORTHO05D005106 9.2e-40 167.5 119 76.5
Gohir.D02G236000 Gossypium hirsutum HOM05D004388 ORTHO05D005106 2.7e-39 166.0 119 75.6
Sabra09G0082900 Salix brachista HOM05D004388 ORTHO05D005106 2.7e-39 166.0 117 76.1
Manes.15G145400 Manihot esculenta HOM05D004388 ORTHO05D005106 3.5e-39 165.6 120 73.3
Potri.004G147300 Populus trichocarpa HOM05D004388 ORTHO05D005106 7.8e-39 164.5 117 74.4
Prupe.8G112900 Prunus persica HOM05D004388 ORTHO05D005106 3.9e-38 162.2 118 74.6
CANSAT25G3863 Cannabis sativa HOM05D004388 ORTHO05D005106 3.3e-37 159.1 119 72.3
TAR376G0986 Trochodendron aralioides HOM05D004388 ORTHO05D005106 3.3e-37 159.1 123 71.5
QL03p018404 Quercus lobata HOM05D004388 ORTHO05D005106 4.3e-37 158.7 119 71.4
COL.COLO4_17768 Corchorus olitorius HOM05D004388 ORTHO05D005106 2.8e-36 156.0 118 76.3
MELO3C018419.2 Cucumis melo HOM05D004388 ORTHO05D005106 3.6e-36 155.6 111 75.7
QL11p039202 Quercus lobata HOM05D004388 ORTHO05D005106 3.6e-36 155.6 119 69.7
CiPaw.05G058500 Carya illinoinensis HOM05D004388 ORTHO05D005106 4.7e-36 155.2 110 74.5
Ciclev10030439m.g Citrus clementina HOM05D004388 ORTHO05D005106 6.2e-36 154.8 120 69.2
ClCG02G005540 Citrullus lanatus HOM05D004388 ORTHO05D005106 8.1e-36 154.5 120 71.7
Cc02_g18220 Coffea canephora HOM05D004388 ORTHO05D005106 1.8e-35 153.3 120 70.0
CsaV3_7G010090 Cucumis sativus L. HOM05D004388 ORTHO05D005106 1.8e-35 153.3 164 59.1
RcHm_v2.0_Chr3g0487591 Rosa chinensis HOM05D004388 ORTHO05D005106 5.2e-35 151.8 119 67.2
CSS0032006 Camellia sinensis var. sinensis HOM05D004388 ORTHO05D005106 6.8e-35 151.4 99 77.8
FAN03G2535 Fragaria x ananassa HOM05D004388 ORTHO05D005106 2.0e-34 149.8 119 68.9
FvH4_7g04430 Fragaria vesca HOM05D004388 ORTHO05D005106 2.6e-34 149.4 119 68.1
FAN06G3575 Fragaria x ananassa HOM05D004388 ORTHO05D005106 2.6e-34 149.4 119 68.1
FvH4_1g27200 Fragaria vesca HOM05D004388 ORTHO05D005106 3.4e-34 149.1 119 67.2
FAN15G0910 Fragaria x ananassa HOM05D004388 ORTHO05D005106 3.4e-34 149.1 119 65.5
FAN26G1198 Fragaria x ananassa HOM05D004388 ORTHO05D005106 3.4e-34 149.1 119 67.2
FAN27G3490 Fragaria x ananassa HOM05D004388 ORTHO05D005106 3.4e-34 149.1 119 69.7
FAN28G0470 Fragaria x ananassa HOM05D004388 ORTHO05D005106 3.4e-34 149.1 119 67.2
FAN06G4461 Fragaria x ananassa HOM05D004388 ORTHO05D005106 4.4e-34 148.7 119 68.1
COL.COLO4_26416 Corchorus olitorius HOM05D004388 ORTHO05D005106 5.8e-34 148.3 123 66.7
Nn5g29406 Nelumbo nucifera HOM05D004388 ORTHO05D005106 7.6e-34 147.9 123 69.1
FvH4_2g07330 Fragaria vesca HOM05D004388 ORTHO05D005106 9.9e-34 147.5 119 68.1
FAN24G3543 Fragaria x ananassa HOM05D004388 ORTHO05D005106 9.9e-34 147.5 119 68.1
FAN19G2330 Fragaria x ananassa HOM05D004388 ORTHO05D005106 1.3e-33 147.1 119 66.4
FAN10G0172 Fragaria x ananassa HOM05D004388 ORTHO05D005106 1.7e-33 146.7 119 66.4
Cfa004944 Carpinus fangiana HOM05D004388 ORTHO05D005106 2.2e-33 146.4 94 79.8
Peaxi162Scf00684g00563 Petunia axillaris HOM05D004388 ORTHO05D005106 2.2e-33 146.4 120 69.2
Hma1.2p1_1527F.1_g289065 Hydrangea macrophylla HOM05D004388 ORTHO05D005106 2.9e-33 146.0 120 65.8
FAN23G2994 Fragaria x ananassa HOM05D004388 ORTHO05D005106 3.8e-33 145.6 119 66.4
FAN28G0922 Fragaria x ananassa HOM05D004388 ORTHO05D005106 3.8e-33 145.6 119 68.1
Nn6g32144 Nelumbo nucifera HOM05D004388 ORTHO05D005106 8.4e-33 144.4 125 67.2
MD05G1072400 Malus domestica HOM05D004388 ORTHO05D005106 3.2e-32 142.5 120 65.8
Eucgr.G01518 Eucalyptus grandis HOM05D004388 ORTHO05D005106 7.1e-32 141.4 111 66.7
Oeu034076.1 Olea europaea HOM05D004388 ORTHO05D005106 7.1e-32 141.4 120 65.0
Sed0011034 Sechium edule HOM05D004388 ORTHO05D005106 7.1e-32 141.4 154 54.5
CSS0020304 Camellia sinensis var. sinensis HOM05D004388 ORTHO05D005106 9.2e-32 141.0 121 66.9
Nitab4.5_0001401g0180 Nicotiana tabacum HOM05D004388 ORTHO05D005106 9.2e-32 141.0 118 66.1
TAR625G0696 Trochodendron aralioides HOM05D004388 ORTHO05D005106 1.2e-31 140.6 124 65.3
CSS0016442 Camellia sinensis var. sinensis HOM05D004388 ORTHO05D005106 1.6e-31 140.2 121 66.9
Lalb_Chr01g0003011 Lupinus albus HOM05D004388 ORTHO05D005106 2.1e-31 139.8 99 74.7
Nitab4.5_0008194g0060 Nicotiana tabacum HOM05D004388 ORTHO05D005106 2.7e-31 139.4 118 65.3
Glyma.07G163600 Glycine max HOM05D004388 ORTHO05D005106 3.5e-31 139.0 108 67.6
MSTRG.20123 Avicennia marina HOM05D004388 ORTHO05D005106 1.0e-30 137.5 117 63.2
Hma1.2p1_0584F.1_g183220 Hydrangea macrophylla HOM05D004388 ORTHO05D005106 1.3e-30 137.1 122 63.1
Potri.014G037000 Populus trichocarpa HOM05D004388 ORTHO05D005106 1.3e-30 137.1 121 65.3
Peaxi162Scf00016g01338 Petunia axillaris HOM05D004388 ORTHO05D005106 2.3e-30 136.3 110 68.2
DCAR_001610 Daucus carota HOM05D004388 ORTHO05D005106 3.9e-30 135.6 122 65.6
Migut.B00292 Erythranthe guttata HOM05D004388 ORTHO05D005106 3.9e-30 135.6 120 62.5
Glyma.20G008600 Glycine max HOM05D004388 ORTHO05D005106 3.9e-30 135.6 110 67.3
HanXRQChr04g0128391 Helianthus annuus HOM05D004388 ORTHO05D005106 3.9e-30 135.6 120 64.2
MBI16_g31481_MAGBIO Magnolia biondii HOM05D004388 ORTHO05D005106 5.1e-30 135.2 123 65.0
Manes.05G168800 Manihot esculenta HOM05D004388 ORTHO05D005106 5.1e-30 135.2 121 61.2
GSVIVG01009587001 Vitis vinifera HOM05D004388 ORTHO05D005106 5.1e-30 135.2 120 66.7
AUR62033874 Chenopodium quinoa HOM05D004388 ORTHO05D005106 8.6e-30 134.4 120 62.5
AUR62040093 Chenopodium quinoa HOM05D004388 ORTHO05D005106 8.6e-30 134.4 120 62.5
Cpa.g.sc64.17 Carica papaya HOM05D004388 ORTHO05D005106 1.1e-29 134.0 122 66.4
Phvul.003G011200 Phaseolus vulgaris HOM05D004388 ORTHO05D005106 1.5e-29 133.7 106 67.9
EL10Ac1g01755 Beta vulgaris HOM05D004388 ORTHO05D005106 1.9e-29 133.3 97 73.2
Glyma.06G035900 Glycine max HOM05D004388 ORTHO05D005106 1.9e-29 133.3 120 61.7
Lalb_Chr10g0095391 Lupinus albus HOM05D004388 ORTHO05D005106 3.3e-29 132.5 109 67.9
VMungo1215G1405 Vigna mungo HOM05D004388 ORTHO05D005106 4.3e-29 132.1 110 65.5
Lalb_Chr11g0062471 Lupinus albus HOM05D004388 ORTHO05D005106 5.6e-29 131.7 119 57.1
BcaB01g03018 Brassica carinata HOM05D004388 ORTHO05D005106 9.6e-29 131.0 98 69.4
MD10G1086700 Malus domestica HOM05D004388 ORTHO05D005106 9.6e-29 131.0 113 66.4
Sabra14G0026600 Salix brachista HOM05D004388 ORTHO05D005106 9.6e-29 131.0 119 63.0
CAN.G322.84 Capsicum annuum HOM05D004388 ORTHO05D005106 1.2e-28 130.6 122 59.8
DCAR_000094 Daucus carota HOM05D004388 ORTHO05D005106 1.2e-28 130.6 113 64.6
DCAR_029046 Daucus carota HOM05D004388 ORTHO05D005106 1.2e-28 130.6 113 64.6
Ah.09g229630 Amaranthus hybridus HOM05D004388 ORTHO05D005106 1.6e-28 130.2 123 63.4
CiPaw.16G051700 Carya illinoinensis HOM05D004388 ORTHO05D005106 1.6e-28 130.2 121 63.6
Glyma.04G035900 Glycine max HOM05D004388 ORTHO05D005106 1.6e-28 130.2 120 60.0
Gorai.010G015700 Gossypium raimondii HOM05D004388 ORTHO05D005106 1.6e-28 130.2 122 62.3
Ca_12477_v3 Cicer arietinum L. HOM05D004388 ORTHO05D005106 2.1e-28 129.8 96 71.9
Medtr1g034260 Medicago truncatula HOM05D004388 ORTHO05D005106 2.1e-28 129.8 125 60.8
Atru.BG.71.p Acer truncatum HOM05D004388 ORTHO05D005106 2.8e-28 129.4 94 76.6
Sc15g0006590 Simmondsia chinensis HOM05D004388 ORTHO05D005106 3.6e-28 129.0 111 66.7
ECA236G2461 Erigeron canadensis HOM05D004388 ORTHO05D005106 4.7e-28 128.6 120 62.5
Thecc.08G017000 Theobroma cacao HOM05D004388 ORTHO05D005106 4.7e-28 128.6 125 63.2
Cfa018482 Carpinus fangiana HOM05D004388 ORTHO05D005106 8.1e-28 127.9 95 72.6
THA.LOC104803691 Tarenaya hassleriana HOM05D004388 ORTHO05D005106 8.1e-28 127.9 122 59.8
arahy.Tifrunner.gnm1.ann1.ISKM3Z Arachis hypogaea HOM05D004388 ORTHO05D005106 1.1e-27 127.5 129 58.9
VMungo1309G1869 Vigna mungo HOM05D004388 ORTHO05D005106 1.1e-27 127.5 124 58.1
Carub.0004s0666 Capsella rubella HOM05D004388 ORTHO05D005106 1.4e-27 127.1 100 70.0
Dinv36015 Davidia involucrata HOM05D004388 ORTHO05D005106 1.4e-27 127.1 121 63.6
Lsat_1_v5_gn_7_88020 Lactuca sativa HOM05D004388 ORTHO05D005106 1.4e-27 127.1 120 63.3
Sp4g07480 Schrenkiella parvula HOM05D004388 ORTHO05D005106 1.4e-27 127.1 100 70.0
PGSC0003DMG402025831 Solanum tuberosum HOM05D004388 ORTHO05D005106 1.4e-27 127.1 122 60.7
AL4G19340 Arabidopsis lyrata HOM05D004388 ORTHO05D005106 1.8e-27 126.7 100 70.0
FAN20G1062 Fragaria x ananassa HOM05D004388 ORTHO05D005106 3.1e-27 125.9 95 69.5
TWI56G1138 Tripterygium wilfordii HOM05D004388 ORTHO05D005106 3.1e-27 125.9 121 59.5
AT2G26500 Arabidopsis thaliana HOM05D004388 ORTHO05D005106 4.0e-27 125.6 100 69.0
Solyc01g109040.4 Solanum lycopersicum HOM05D004388 ORTHO05D005106 4.0e-27 125.6 122 60.7
unitig_744.g24243 Utricularia gibba HOM05D004388 ORTHO05D005106 4.0e-27 125.6 112 62.5
arahy.Tifrunner.gnm1.ann1.RG9LRA Arachis hypogaea HOM05D004388 ORTHO05D005106 5.2e-27 125.2 130 59.2
PSO170G0356 Papaver somniferum HOM05D004388 ORTHO05D005106 5.2e-27 125.2 122 60.7
Phvul.009G061900 Phaseolus vulgaris HOM05D004388 ORTHO05D005106 5.2e-27 125.2 124 58.9
SalBow6G5992 Salvia bowleyana HOM05D004388 ORTHO05D005106 5.2e-27 125.2 111 63.1
PGSC0003DMG400006208 Solanum tuberosum HOM05D004388 ORTHO05D005106 5.2e-27 125.2 120 60.8
Thhalv10001257m.g Eutrema salsugineum HOM05D004388 ORTHO05D005106 6.9e-27 124.8 100 68.0
Sopen01g051240 Solanum pennellii HOM05D004388 ORTHO05D005106 6.9e-27 124.8 122 59.8
BcaC07g40816 Brassica carinata HOM05D004388 ORTHO05D005106 8.9e-27 124.4 100 69.0
A09p55160 Brassica napus HOM05D004388 ORTHO05D005106 8.9e-27 124.4 100 69.0
C08p38090 Brassica napus HOM05D004388 ORTHO05D005106 8.9e-27 124.4 100 69.0
BolC8t51384H Brassica oleracea HOM05D004388 ORTHO05D005106 8.9e-27 124.4 100 69.0
BraA09t40924Z Brassica rapa HOM05D004388 ORTHO05D005106 8.9e-27 124.4 100 69.0
unitig_21.g20762 Utricularia gibba HOM05D004388 ORTHO05D005106 2.0e-26 123.2 110 62.7
Sopen10g022090 Solanum pennellii HOM05D004388 ORTHO05D005106 3.4e-26 122.5 109 63.3
Eucgr.I01216 Eucalyptus grandis HOM05D004388 ORTHO05D005106 4.4e-26 122.1 104 63.5
HanXRQChr16g0506081 Helianthus annuus HOM05D004388 ORTHO05D005106 4.4e-26 122.1 119 59.7
PGR042G3241 Punica granatum HOM05D004388 ORTHO05D005106 4.4e-26 122.1 94 74.5
CARHR118500 Cardamine hirsuta HOM05D004388 ORTHO05D005106 7.6e-26 121.3 100 68.0
PSO541G0781 Papaver somniferum HOM05D004388 ORTHO05D005106 9.9e-26 120.9 120 60.0
arahy.Tifrunner.gnm1.ann1.2I4SWN Arachis hypogaea HOM05D004388 ORTHO05D005106 1.7e-25 120.2 118 60.2
Aa31LG5G9370 Aethionema arabicum HOM05D004388 ORTHO05D005106 2.9e-25 119.4 97 71.1
unitig_0.g849 Utricularia gibba HOM05D004388 ORTHO05D005106 4.9e-25 118.6 120 60.8
ATR0733G197 Amborella trichopoda HOM05D004388 ORTHO05D005106 8.4e-25 117.9 119 58.8
Lalb_Chr08g0245721 Lupinus albus HOM05D004388 ORTHO05D005106 1.4e-24 117.1 120 53.3
Lj1g0026402 Lotus japonicus HOM05D004388 ORTHO05D005106 2.4e-24 116.3 96 67.7
Actinidia00479 Actinidia chinensis HOM05D000395 ORTHO05D005106 1.2e-23 114.0 135 49.6
Psat6g097040 Pisum sativum HOM05D004388 ORTHO05D005106 4.6e-23 112.1 122 54.9
SGA_v2.0_scaffold58G20597 Striga asiatica HOM05D004388 ORTHO05D005106 4.6e-23 112.1 123 55.3
Aqoxy6G00936 Aquilegia oxysepala HOM05D004388 ORTHO05D005106 3.0e-22 109.4 121 56.2
TWI36G1636 Tripterygium wilfordii HOM05D004388 ORTHO05D005106 3.3e-21 105.9 124 50.8
HPP92_017776 Vanilla planifolia HOM05D004388 ORTHO05D005106 3.3e-21 105.9 113 56.6
TWI12G0249 Tripterygium wilfordii HOM05D004388 ORTHO05D005106 9.6e-21 104.4 98 62.2
Os03g0765900 Oryza sativa ssp. japonica HOM05D004388 ORTHO05D005106 3.6e-20 102.4 111 55.0
Rhsim05G0079000 Rhododendron simsii HOM05D004388 ORTHO05D005106 1.4e-19 100.5 121 53.7
Zm00001eb214080 Zea mays HOM05D004388 ORTHO05D005106 2.6e-18 96.3 116 50.0
Potri.002G130000 Populus trichocarpa HOM05D004388 ORTHO05D005106 1.3e-17 94.0 102 56.9
Zm00001eb058590 Zea mays HOM05D004388 ORTHO05D005106 1.3e-17 94.0 115 50.4
TPR.G40836 Trifolium pratense HOM05D004388 ORTHO05D005106 5.4e-16 88.6 73 67.1
Pp3c5_10730 Physcomitrium patens HOM05D004388 ORTHO05D005106 3.5e-15 85.9 111 45.0
Pp3c6_20300 Physcomitrium patens HOM05D004388 ORTHO05D005106 6.0e-15 85.1 111 44.1
AagrBONN_evm.TU.Sc2ySwM_228.5818 Anthoceros agrestis HOM05D004388 ORTHO05D005106 2.3e-14 83.2 88 51.1
Oeu010570.1 Olea europaea HOM05D000395 ORTHO05D000088 2.3e-14 83.2 73 60.3
BcaB08g35304 Brassica carinata HOM05D004388 ORTHO05D005106 5.1e-14 82.0 51 82.4
CDE01G0191 Ceratophyllum demersum HOM05D004388 ORTHO05D005106 2.5e-13 79.7 49 83.7
Psat4g068600 Pisum sativum HOM05D004388 ORTHO05D005106 1.3e-12 77.4 101 48.5
CBR_g48936 Chara braunii HOM05D004388 ORTHO05D005106 1.1e-11 74.3 121 40.5
GSVIVG01031853001 Vitis vinifera HOM05D008110 ORTHO05D005106 1.4e-11 73.9 143 40.6
SMO361G0239 Selaginella moellendorffii HOM05D004388 ORTHO05D005106 1.8e-11 73.6 110 40.9
Mapoly0043s0110 Marchantia polymorpha HOM05D004388 ORTHO05D005106 4.0e-11 72.4 99 43.4
Actinidia12967 Actinidia chinensis HOM05D008110 ORTHO05D000088 3.0e-06 56.2 78 41.0


User provided reference genes

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