Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib248G0169 Durio zibethinus HOM05D006231 ORTHO05D007857 1.8e-176 622.5 308 100.0
Thecc.02G247800 Theobroma cacao HOM05D006231 ORTHO05D007857 1.7e-142 509.6 303 86.1
Gohir.D05G320900 Gossypium hirsutum HOM05D006231 ORTHO05D007857 1.2e-140 503.4 304 82.6
Gorai.009G344200 Gossypium raimondii HOM05D006231 ORTHO05D007857 3.5e-140 501.9 304 82.2
Gohir.D02G165000 Gossypium hirsutum HOM05D006231 ORTHO05D007857 3.0e-139 498.8 303 82.5
Gohir.A05G318600 Gossypium hirsutum HOM05D006231 ORTHO05D007857 2.9e-134 482.3 304 80.3
COL.COLO4_19536 Corchorus olitorius HOM05D006231 ORTHO05D007857 4.9e-134 481.5 308 79.5
Gorai.005G184900 Gossypium raimondii HOM05D006231 ORTHO05D007857 3.2e-117 425.6 303 73.9
Ciclev10032202m.g Citrus clementina HOM05D006231 ORTHO05D007857 3.1e-104 382.5 309 65.0
QL03p062170 Quercus lobata HOM05D006231 ORTHO05D007857 1.1e-98 364.0 318 63.2
Atru.chr11.1975 Acer truncatum HOM05D006231 ORTHO05D007857 2.8e-97 359.4 322 62.4
THA.LOC104822957 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 8.1e-97 357.8 301 63.8
PGSC0003DMG400004132 Solanum tuberosum HOM05D006231 ORTHO05D007857 3.8e-94 349.0 309 59.9
Manes.01G197500 Manihot esculenta HOM05D006231 ORTHO05D007857 8.4e-94 347.8 327 57.8
Cfa009127 Carpinus fangiana HOM05D006231 ORTHO05D007857 5.5e-93 345.1 316 63.0
THA.LOC104822056 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 5.5e-93 345.1 313 61.3
Eucgr.B02548 Eucalyptus grandis HOM05D006231 ORTHO05D007857 2.7e-92 342.8 278 65.5
Gohir.A03G141850 Gossypium hirsutum HOM05D006231 ORTHO05D007857 2.3e-91 339.7 217 80.2
Dinv24894 Davidia involucrata HOM05D006231 ORTHO05D007857 3.9e-91 339.0 304 58.6
AL1G37790 Arabidopsis lyrata HOM05D006231 ORTHO05D007857 8.7e-91 337.8 321 56.7
Nitab4.5_0001474g0130 Nicotiana tabacum HOM05D006231 ORTHO05D007857 1.1e-90 337.4 313 57.8
TWI36G0577 Tripterygium wilfordii HOM05D006231 ORTHO05D007857 1.1e-90 337.4 304 61.2
FvH4_4g34910 Fragaria vesca HOM05D006231 ORTHO05D007857 1.5e-90 337.0 330 57.9
Sp1g21370 Schrenkiella parvula HOM05D006231 ORTHO05D007857 1.5e-90 337.0 322 56.8
C05p23180 Brassica napus HOM05D006231 ORTHO05D007857 3.3e-90 335.9 323 57.0
Sopen05g001920 Solanum pennellii HOM05D006231 ORTHO05D007857 4.3e-90 335.5 309 57.6
Aa31LG7G7830 Aethionema arabicum HOM05D006231 ORTHO05D007857 5.6e-90 335.1 308 59.1
BcaB07g32378 Brassica carinata HOM05D006231 ORTHO05D007857 5.6e-90 335.1 331 55.9
TAR629G0133 Trochodendron aralioides HOM05D006231 ORTHO05D007857 5.6e-90 335.1 315 58.4
AT1G24040 Arabidopsis thaliana HOM05D006231 ORTHO05D007857 7.4e-90 334.7 322 56.2
CARHR024340 Cardamine hirsuta HOM05D006231 ORTHO05D007857 7.4e-90 334.7 322 57.1
BcaC05g26301 Brassica carinata HOM05D006231 ORTHO05D007857 1.3e-89 334.0 331 57.1
BolC5t31019H Brassica oleracea HOM05D006231 ORTHO05D007857 1.3e-89 334.0 331 57.1
CiPaw.05G148900 Carya illinoinensis HOM05D006231 ORTHO05D007857 1.3e-89 334.0 315 60.6
Nitab4.5_0004963g0030 Nicotiana tabacum HOM05D006231 ORTHO05D007857 1.3e-89 334.0 313 58.1
Carub.0001s2346 Capsella rubella HOM05D006231 ORTHO05D007857 1.6e-89 333.6 320 57.8
CAN.G505.18 Capsicum annuum HOM05D006231 ORTHO05D007857 2.1e-89 333.2 305 59.7
Thhalv10008192m.g Eutrema salsugineum HOM05D006231 ORTHO05D007857 4.8e-89 332.0 320 57.8
RcHm_v2.0_Chr4g0444351 Rosa chinensis HOM05D006231 ORTHO05D007857 1.1e-88 330.9 331 55.3
Sed0009573 Sechium edule HOM05D006231 ORTHO05D007857 1.4e-88 330.5 286 62.2
ClCG05G025120 Citrullus lanatus HOM05D006231 ORTHO05D007857 1.8e-88 330.1 291 61.5
CsaV3_5G031780 Cucumis sativus L. HOM05D006231 ORTHO05D007857 4.0e-88 328.9 254 66.5
PGR119G0912 Punica granatum HOM05D006231 ORTHO05D007857 7.6e-87 324.7 285 60.4
arahy.Tifrunner.gnm1.ann1.FQS9XH Arachis hypogaea HOM05D006231 ORTHO05D007857 1.7e-86 323.6 316 56.6
arahy.Tifrunner.gnm1.ann1.XK2UET Arachis hypogaea HOM05D006231 ORTHO05D007857 1.7e-86 323.6 316 56.6
MELO3C012017.2 Cucumis melo HOM05D006231 ORTHO05D007857 1.7e-86 323.6 247 68.0
FAN12G2615 Fragaria x ananassa HOM05D006231 ORTHO05D007857 2.9e-86 322.8 316 57.9
Haze_12158 Corylus avellana HOM05D006231 ORTHO05D007857 4.9e-86 322.0 225 74.2
Potri.008G146000 Populus trichocarpa HOM05D006231 ORTHO05D007857 1.9e-85 320.1 315 54.6
Oeu046714.1 Olea europaea HOM05D006231 ORTHO05D007857 2.5e-85 319.7 283 60.4
MD16G1088300 Malus domestica HOM05D006231 ORTHO05D007857 3.2e-85 319.3 343 53.6
Prupe.1G258300 Prunus persica HOM05D006231 ORTHO05D007857 5.5e-85 318.5 354 52.0
Cc11_g14350 Coffea canephora HOM05D006231 ORTHO05D007857 2.3e-83 313.2 303 55.1
Lalb_Chr09g0326451 Lupinus albus HOM05D006231 ORTHO05D007857 2.3e-83 313.2 287 58.9
Aqoxy3G00933 Aquilegia oxysepala HOM05D006231 ORTHO05D007857 3.0e-83 312.8 307 55.4
Lj2g0015887 Lotus japonicus HOM05D006231 ORTHO05D007857 6.7e-83 311.6 320 54.4
CANSAT01G1818 Cannabis sativa HOM05D006231 ORTHO05D007857 8.7e-83 311.2 223 71.3
Hma1.2p1_1017F.1_g248270 Hydrangea macrophylla HOM05D006231 ORTHO05D007857 1.1e-82 310.8 279 59.9
Nn4g22867 Nelumbo nucifera HOM05D006231 ORTHO05D007857 1.5e-82 310.5 323 54.8
Potri.010G095800 Populus trichocarpa HOM05D006231 ORTHO05D007857 1.9e-82 310.1 329 52.3
vmacro16274 Vaccinium macrocarpon HOM05D006231 ORTHO05D007857 1.9e-82 310.1 235 67.2
FAN22G0458 Fragaria x ananassa HOM05D006231 ORTHO05D007857 5.7e-82 308.5 337 54.0
Peaxi162Scf00421g00419 Petunia axillaris HOM05D006231 ORTHO05D007857 2.2e-81 306.6 312 55.4
CSS0044234 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 4.8e-81 305.4 311 54.0
FAN17G2958 Fragaria x ananassa HOM05D006231 ORTHO05D007857 4.8e-81 305.4 330 54.8
CSS0002380 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 6.3e-81 305.1 309 54.4
MD13G1088000 Malus domestica HOM05D006231 ORTHO05D007857 1.8e-80 303.5 252 61.5
Actinidia15012 Actinidia chinensis HOM05D006231 ORTHO05D007857 3.1e-80 302.8 308 54.5
MSTRG.613 Avicennia marina HOM05D006231 ORTHO05D007857 3.1e-80 302.8 302 56.0
BraA09t39576Z Brassica rapa HOM05D006231 ORTHO05D007857 5.3e-80 302.0 297 55.6
PSO478G5064 Papaver somniferum HOM05D006231 ORTHO05D007857 5.3e-80 302.0 310 54.5
A09p40810 Brassica napus HOM05D006231 ORTHO05D007857 6.9e-80 301.6 299 56.2
FAN07G0090 Fragaria x ananassa HOM05D006231 ORTHO05D007857 2.0e-79 300.1 330 53.3
CSS0037524 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 1.4e-77 293.9 236 61.9
Psat2g109920 Pisum sativum HOM05D006231 ORTHO05D007857 1.9e-77 293.5 305 55.1
PSO017G5161 Papaver somniferum HOM05D006231 ORTHO05D007857 2.5e-77 293.1 309 54.7
SalBow2G0481 Salvia bowleyana HOM05D006231 ORTHO05D007857 3.2e-77 292.7 253 60.5
Glyma.01G034200 Glycine max HOM05D006231 ORTHO05D007857 5.5e-77 292.0 251 61.4
Sabra10G0068400 Salix brachista HOM05D006231 ORTHO05D007857 9.4e-77 291.2 363 46.6
Sc11g0001330 Simmondsia chinensis HOM05D006231 ORTHO05D007857 9.4e-77 291.2 300 54.7
Lsat_1_v5_gn_8_158260 Lactuca sativa HOM05D006231 ORTHO05D007857 1.0e-75 287.7 294 55.8
AUR62005324 Chenopodium quinoa HOM05D006231 ORTHO05D007857 1.4e-75 287.3 318 51.3
EL10Ac6g13629 Beta vulgaris HOM05D006231 ORTHO05D007857 1.8e-75 287.0 305 54.1
ECA233G1652 Erigeron canadensis HOM05D006231 ORTHO05D007857 2.3e-75 286.6 287 54.4
Ca_04621_v3 Cicer arietinum L. HOM05D006231 ORTHO05D007857 3.9e-75 285.8 305 53.8
Hund25325 Selenicereus undatus HOM05D006231 ORTHO05D007857 1.5e-74 283.9 278 56.1
Migut.L01438 Erythranthe guttata HOM05D006231 ORTHO05D007857 4.3e-74 282.3 250 58.8
TPR.G4354 Trifolium pratense HOM05D006231 ORTHO05D007857 7.4e-74 281.6 269 56.1
AUR62013974 Chenopodium quinoa HOM05D006231 ORTHO05D007857 1.3e-73 280.8 323 50.8
Glyma.02G032100 Glycine max HOM05D006231 ORTHO05D007857 2.8e-73 279.6 264 56.4
HanXRQChr08g0208971 Helianthus annuus HOM05D006231 ORTHO05D007857 1.1e-72 277.7 298 53.7
Lj3A1049T58 Lonicera japonica HOM05D006231 ORTHO05D007857 1.5e-71 273.9 257 57.6
unitig_22.g6476 Utricularia gibba HOM05D006231 ORTHO05D007857 4.5e-71 272.3 242 58.3
Medtr5g035060 Medicago truncatula HOM05D006231 ORTHO05D007857 1.7e-70 270.4 306 52.0
Ah.03g132450 Amaranthus hybridus HOM05D006231 ORTHO05D007857 2.2e-70 270.0 294 50.7
DCAR_024529 Daucus carota HOM05D006231 ORTHO05D007857 2.2e-70 270.0 199 64.8
Rhsim12G0123300 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.9e-70 269.6 283 54.8
VMungo1215G3085 Vigna mungo HOM05D006231 ORTHO05D007857 3.6e-68 262.7 275 51.6
Sabra08G0111000 Salix brachista HOM05D006231 ORTHO05D007857 7.9e-68 261.5 204 64.7
Phvul.002G073400 Phaseolus vulgaris HOM05D006231 ORTHO05D007857 6.7e-67 258.5 273 52.0
SGA_v2.0_scaffold166G38349 Striga asiatica HOM05D006231 ORTHO05D007857 4.1e-64 249.2 334 46.1
CDE10G0954 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 1.5e-63 247.3 246 54.9
MBI15_g12952_MAGBIO Magnolia biondii HOM05D006231 ORTHO05D007857 7.7e-63 245.0 292 47.6
SEGI_07841 Sequoiadendron giganteum HOM05D006231 ORTHO05D007857 2.8e-57 226.5 207 55.6
CDE10G0637 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 4.8e-57 225.7 174 64.9
ATR1149G099 Amborella trichopoda HOM05D006231 ORTHO05D007857 2.4e-56 223.4 179 64.8
Solyc05g005890.2 Solanum lycopersicum HOM05D006231 ORTHO05D007857 3.1e-56 223.0 149 71.8
HPP92_010904 Vanilla planifolia HOM05D006231 ORTHO05D007857 5.3e-56 222.2 269 47.2
Medtr5g035040 Medicago truncatula HOM05D006231 ORTHO05D007857 2.2e-54 216.9 222 54.1
GSVIVG01020181001 Vitis vinifera HOM05D006231 ORTHO05D007857 1.9e-53 213.8 133 75.9
SEGI_36756 Sequoiadendron giganteum HOM05D006231 ORTHO05D007857 4.1e-48 196.1 213 48.8
Os04g0465500 Oryza sativa ssp. japonica HOM05D006231 ORTHO05D007857 1.0e-46 191.4 230 47.4
Zm00001eb424460 Zea mays HOM05D006231 ORTHO05D007857 4.2e-45 186.0 242 44.6
Psat2g109880 Pisum sativum HOM05D006231 ORTHO05D007857 8.3e-41 171.8 224 48.7
Pp3c2_6130 Physcomitrium patens HOM05D006231 ORTHO05D007857 4.1e-40 169.5 216 46.8
Pp3c2_6132 Physcomitrium patens HOM05D006231 ORTHO05D007857 4.1e-40 169.5 216 46.8
Mapoly0005s0071 Marchantia polymorpha HOM05D006231 ORTHO05D007857 1.7e-38 164.1 222 45.0
Zm00001eb348680 Zea mays HOM05D006231 ORTHO05D007857 1.1e-37 161.4 229 41.9
SMO365G0079 Selaginella moellendorffii HOM05D006231 ORTHO05D007857 1.4e-32 144.4 196 42.3
AagrBONN_evm.TU.Sc2ySwM_368.2752 Anthoceros agrestis HOM05D006231 ORTHO05D007857 1.7e-25 120.9 180 43.3
Medtr5g035050 Medicago truncatula HOM05D006231 ORTHO05D007857 1.7e-25 120.9 84 70.2
CBR_g40430 Chara braunii HOM05D017800 ORTHO05D019665 5.4e-24 115.9 211 36.5
Dinv31098 Davidia involucrata HOM05D006231 ORTHO05D007857 1.6e-23 114.4 91 65.9
TAR622G0489 Trochodendron aralioides HOM05D006231 ORTHO05D007857 3.9e-14 83.2 58 70.7
Cre10.g464750 Chlamydomonas reinhardtii HOM05D006231 ORTHO05D007857 1.0e-06 58.5 216 22.7


User provided reference genes

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