Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib248G0127 Durio zibethinus HOM05D004388 ORTHO05D005106 2.7e-59 231.9 124 100.0
Duzib248G1645 Durio zibethinus HOM05D004388 ORTHO05D005106 4.8e-56 221.1 124 96.0
Gorai.002G214600 Gossypium raimondii HOM05D004388 ORTHO05D005106 1.5e-49 199.5 122 88.5
Gohir.D01G173000 Gossypium hirsutum HOM05D004388 ORTHO05D005106 2.5e-49 198.7 122 88.5
Gohir.A01G181900 Gossypium hirsutum HOM05D004388 ORTHO05D005106 1.1e-47 193.4 122 84.4
Duzib052G1120 Durio zibethinus HOM05D004388 ORTHO05D005106 1.8e-47 192.6 124 85.5
Duzib132G0841 Durio zibethinus HOM05D004388 ORTHO05D005106 1.2e-46 189.9 126 83.3
Duzib248G0675 Durio zibethinus HOM05D004388 ORTHO05D005106 1.1e-44 183.3 118 86.4
Thecc.02G028000 Theobroma cacao HOM05D004388 ORTHO05D005106 7.2e-44 180.6 124 83.1
Gorai.005G264100 Gossypium raimondii HOM05D004388 ORTHO05D005106 7.4e-41 170.6 126 78.6
Gohir.D02G236000 Gossypium hirsutum HOM05D004388 ORTHO05D005106 2.2e-40 169.1 126 77.8
Gohir.A03G214500 Gossypium hirsutum HOM05D004388 ORTHO05D005106 3.7e-40 168.3 126 75.4
MELO3C018419.2 Cucumis melo HOM05D004388 ORTHO05D005106 6.3e-40 167.5 126 76.2
Potri.009G108700 Populus trichocarpa HOM05D004388 ORTHO05D005106 1.1e-39 166.8 124 75.0
CsaV3_7G010090 Cucumis sativus L. HOM05D004388 ORTHO05D005106 4.1e-39 164.9 126 74.6
ClCG02G005540 Citrullus lanatus HOM05D004388 ORTHO05D005106 1.2e-38 163.3 126 74.6
Sabra09G0082900 Salix brachista HOM05D004388 ORTHO05D005106 1.0e-37 160.2 124 73.4
COL.COLO4_17768 Corchorus olitorius HOM05D004388 ORTHO05D005106 1.3e-37 159.8 123 74.8
Potri.004G147300 Populus trichocarpa HOM05D004388 ORTHO05D005106 2.9e-37 158.7 124 71.8
Ciclev10030439m.g Citrus clementina HOM05D004388 ORTHO05D005106 1.1e-36 156.8 126 69.8
Manes.15G145400 Manihot esculenta HOM05D004388 ORTHO05D005106 7.2e-36 154.1 126 69.0
Prupe.8G112900 Prunus persica HOM05D004388 ORTHO05D005106 7.2e-36 154.1 123 71.5
CANSAT25G3863 Cannabis sativa HOM05D004388 ORTHO05D005106 9.4e-36 153.7 125 71.2
CiPaw.05G058500 Carya illinoinensis HOM05D004388 ORTHO05D005106 9.4e-36 153.7 121 72.7
QL03p018404 Quercus lobata HOM05D004388 ORTHO05D005106 2.1e-35 152.5 120 70.0
Nn5g29406 Nelumbo nucifera HOM05D004388 ORTHO05D005106 4.7e-35 151.4 127 69.3
RcHm_v2.0_Chr3g0487591 Rosa chinensis HOM05D004388 ORTHO05D005106 1.0e-34 150.2 125 66.4
Hma1.2p1_1527F.1_g289065 Hydrangea macrophylla HOM05D004388 ORTHO05D005106 1.8e-34 149.4 124 67.7
QL11p039202 Quercus lobata HOM05D004388 ORTHO05D005106 1.8e-34 149.4 120 68.3
FvH4_1g27200 Fragaria vesca HOM05D004388 ORTHO05D005106 5.1e-34 147.9 123 65.9
TAR376G0986 Trochodendron aralioides HOM05D004388 ORTHO05D005106 5.1e-34 147.9 127 67.7
FAN15G0910 Fragaria x ananassa HOM05D004388 ORTHO05D005106 8.8e-34 147.1 123 65.0
FAN26G1198 Fragaria x ananassa HOM05D004388 ORTHO05D005106 1.1e-33 146.7 123 65.0
FAN28G0470 Fragaria x ananassa HOM05D004388 ORTHO05D005106 1.1e-33 146.7 123 65.0
FvH4_7g04430 Fragaria vesca HOM05D004388 ORTHO05D005106 1.5e-33 146.4 125 64.8
FAN06G3575 Fragaria x ananassa HOM05D004388 ORTHO05D005106 1.5e-33 146.4 125 64.8
FAN19G2330 Fragaria x ananassa HOM05D004388 ORTHO05D005106 2.0e-33 146.0 123 65.0
FAN06G4461 Fragaria x ananassa HOM05D004388 ORTHO05D005106 2.6e-33 145.6 125 64.8
Nn6g32144 Nelumbo nucifera HOM05D004388 ORTHO05D005106 2.6e-33 145.6 129 65.9
FAN03G2535 Fragaria x ananassa HOM05D004388 ORTHO05D005106 4.4e-33 144.8 124 65.3
CSS0032006 Camellia sinensis var. sinensis HOM05D004388 ORTHO05D005106 5.7e-33 144.4 102 73.5
FAN27G3490 Fragaria x ananassa HOM05D004388 ORTHO05D005106 7.4e-33 144.1 124 66.1
MD05G1072400 Malus domestica HOM05D004388 ORTHO05D005106 7.4e-33 144.1 124 66.1
FAN28G0922 Fragaria x ananassa HOM05D004388 ORTHO05D005106 9.7e-33 143.7 123 64.2
Oeu034076.1 Olea europaea HOM05D004388 ORTHO05D005106 9.7e-33 143.7 125 65.6
Cc02_g18220 Coffea canephora HOM05D004388 ORTHO05D005106 1.3e-32 143.3 126 65.9
FAN23G2994 Fragaria x ananassa HOM05D004388 ORTHO05D005106 1.3e-32 143.3 123 64.2
Cfa004944 Carpinus fangiana HOM05D004388 ORTHO05D005106 1.7e-32 142.9 96 76.0
FvH4_2g07330 Fragaria vesca HOM05D004388 ORTHO05D005106 2.2e-32 142.5 124 64.5
FAN24G3543 Fragaria x ananassa HOM05D004388 ORTHO05D005106 2.2e-32 142.5 124 64.5
Peaxi162Scf00684g00563 Petunia axillaris HOM05D004388 ORTHO05D005106 2.8e-32 142.1 123 67.5
CSS0016442 Camellia sinensis var. sinensis HOM05D004388 ORTHO05D005106 3.7e-32 141.7 126 67.5
FAN10G0172 Fragaria x ananassa HOM05D004388 ORTHO05D005106 3.7e-32 141.7 125 64.0
COL.COLO4_26416 Corchorus olitorius HOM05D004388 ORTHO05D005106 4.8e-32 141.4 127 63.8
CSS0020304 Camellia sinensis var. sinensis HOM05D004388 ORTHO05D005106 8.2e-32 140.6 125 65.6
Sed0011034 Sechium edule HOM05D004388 ORTHO05D005106 1.1e-31 140.2 125 65.6
Eucgr.G01518 Eucalyptus grandis HOM05D004388 ORTHO05D005106 2.4e-31 139.0 124 66.1
Hma1.2p1_0584F.1_g183220 Hydrangea macrophylla HOM05D004388 ORTHO05D005106 2.4e-31 139.0 128 65.6
Glyma.20G008600 Glycine max HOM05D004388 ORTHO05D005106 4.1e-31 138.3 126 61.9
Lalb_Chr01g0003011 Lupinus albus HOM05D004388 ORTHO05D005106 4.1e-31 138.3 100 74.0
Glyma.07G163600 Glycine max HOM05D004388 ORTHO05D005106 7.0e-31 137.5 124 61.3
TAR625G0696 Trochodendron aralioides HOM05D004388 ORTHO05D005106 2.6e-30 135.6 128 63.3
MBI16_g31481_MAGBIO Magnolia biondii HOM05D004388 ORTHO05D005106 1.3e-29 133.3 126 62.7
EL10Ac1g01755 Beta vulgaris HOM05D004388 ORTHO05D005106 3.8e-29 131.7 127 62.2
AUR62040093 Chenopodium quinoa HOM05D004388 ORTHO05D005106 6.5e-29 131.0 128 60.2
Nitab4.5_0001401g0180 Nicotiana tabacum HOM05D004388 ORTHO05D005106 8.5e-29 130.6 121 60.3
Glyma.06G035900 Glycine max HOM05D004388 ORTHO05D005106 1.1e-28 130.2 124 62.1
GSVIVG01009587001 Vitis vinifera HOM05D004388 ORTHO05D005106 1.1e-28 130.2 126 64.3
Cpa.g.sc64.17 Carica papaya HOM05D004388 ORTHO05D005106 1.5e-28 129.8 126 63.5
Lalb_Chr10g0095391 Lupinus albus HOM05D004388 ORTHO05D005106 1.5e-28 129.8 123 62.6
AUR62033874 Chenopodium quinoa HOM05D004388 ORTHO05D005106 1.9e-28 129.4 128 59.4
MD10G1086700 Malus domestica HOM05D004388 ORTHO05D005106 1.9e-28 129.4 114 65.8
VMungo1215G1405 Vigna mungo HOM05D004388 ORTHO05D005106 1.9e-28 129.4 124 59.7
Nitab4.5_0008194g0060 Nicotiana tabacum HOM05D004388 ORTHO05D005106 2.5e-28 129.0 121 59.5
Peaxi162Scf00016g01338 Petunia axillaris HOM05D004388 ORTHO05D005106 2.5e-28 129.0 119 62.2
Medtr1g034260 Medicago truncatula HOM05D004388 ORTHO05D005106 3.2e-28 128.6 129 61.2
Ah.09g229630 Amaranthus hybridus HOM05D004388 ORTHO05D005106 4.2e-28 128.3 126 61.9
MSTRG.20123 Avicennia marina HOM05D004388 ORTHO05D005106 4.2e-28 128.3 121 62.0
DCAR_001610 Daucus carota HOM05D004388 ORTHO05D005106 4.2e-28 128.3 125 63.2
Phvul.003G011200 Phaseolus vulgaris HOM05D004388 ORTHO05D005106 5.5e-28 127.9 124 59.7
ECA236G2461 Erigeron canadensis HOM05D004388 ORTHO05D005106 9.4e-28 127.1 126 61.1
HanXRQChr04g0128391 Helianthus annuus HOM05D004388 ORTHO05D005106 9.4e-28 127.1 122 62.3
Sc15g0006590 Simmondsia chinensis HOM05D004388 ORTHO05D005106 9.4e-28 127.1 127 60.6
Ca_12477_v3 Cicer arietinum L. HOM05D004388 ORTHO05D005106 1.2e-27 126.7 124 57.3
Potri.014G037000 Populus trichocarpa HOM05D004388 ORTHO05D005106 1.2e-27 126.7 126 60.3
Dinv36015 Davidia involucrata HOM05D004388 ORTHO05D005106 1.6e-27 126.3 127 61.4
CiPaw.16G051700 Carya illinoinensis HOM05D004388 ORTHO05D005106 2.1e-27 125.9 122 62.3
Migut.B00292 Erythranthe guttata HOM05D004388 ORTHO05D005106 2.1e-27 125.9 120 58.3
Lsat_1_v5_gn_7_88020 Lactuca sativa HOM05D004388 ORTHO05D005106 2.7e-27 125.6 125 62.4
PGSC0003DMG400006208 Solanum tuberosum HOM05D004388 ORTHO05D005106 2.7e-27 125.6 126 61.1
Gorai.010G015700 Gossypium raimondii HOM05D004388 ORTHO05D005106 3.6e-27 125.2 126 57.9
Sabra14G0026600 Salix brachista HOM05D004388 ORTHO05D005106 4.7e-27 124.8 127 61.4
BcaB01g03018 Brassica carinata HOM05D004388 ORTHO05D005106 6.1e-27 124.4 127 57.5
DCAR_000094 Daucus carota HOM05D004388 ORTHO05D005106 6.1e-27 124.4 115 61.7
DCAR_029046 Daucus carota HOM05D004388 ORTHO05D005106 6.1e-27 124.4 115 61.7
Atru.BG.71.p Acer truncatum HOM05D004388 ORTHO05D005106 8.0e-27 124.0 93 74.2
arahy.Tifrunner.gnm1.ann1.ISKM3Z Arachis hypogaea HOM05D004388 ORTHO05D005106 1.4e-26 123.2 122 59.8
Cfa018482 Carpinus fangiana HOM05D004388 ORTHO05D005106 1.4e-26 123.2 123 58.5
THA.LOC104803691 Tarenaya hassleriana HOM05D004388 ORTHO05D005106 1.4e-26 123.2 127 56.7
Lalb_Chr11g0062471 Lupinus albus HOM05D004388 ORTHO05D005106 2.3e-26 122.5 124 57.3
Sp4g07480 Schrenkiella parvula HOM05D004388 ORTHO05D005106 4.0e-26 121.7 128 57.8
CAN.G322.84 Capsicum annuum HOM05D004388 ORTHO05D005106 5.2e-26 121.3 126 56.3
arahy.Tifrunner.gnm1.ann1.RG9LRA Arachis hypogaea HOM05D004388 ORTHO05D005106 6.7e-26 120.9 123 60.2
Carub.0004s0666 Capsella rubella HOM05D004388 ORTHO05D005106 6.7e-26 120.9 127 57.5
HanXRQChr16g0506081 Helianthus annuus HOM05D004388 ORTHO05D005106 6.7e-26 120.9 125 59.2
AL4G19340 Arabidopsis lyrata HOM05D004388 ORTHO05D005106 8.8e-26 120.6 127 57.5
Sopen10g022090 Solanum pennellii HOM05D004388 ORTHO05D005106 8.8e-26 120.6 126 58.7
Thecc.08G017000 Theobroma cacao HOM05D004388 ORTHO05D005106 8.8e-26 120.6 129 59.7
Manes.05G168800 Manihot esculenta HOM05D004388 ORTHO05D005106 1.1e-25 120.2 127 56.7
AT2G26500 Arabidopsis thaliana HOM05D004388 ORTHO05D005106 2.0e-25 119.4 127 56.7
Eucgr.I01216 Eucalyptus grandis HOM05D004388 ORTHO05D005106 2.0e-25 119.4 108 61.1
Thhalv10001257m.g Eutrema salsugineum HOM05D004388 ORTHO05D005106 2.0e-25 119.4 128 57.0
BcaC07g40816 Brassica carinata HOM05D004388 ORTHO05D005106 2.6e-25 119.0 128 58.6
A09p55160 Brassica napus HOM05D004388 ORTHO05D005106 2.6e-25 119.0 128 58.6
C08p38090 Brassica napus HOM05D004388 ORTHO05D005106 2.6e-25 119.0 128 58.6
BolC8t51384H Brassica oleracea HOM05D004388 ORTHO05D005106 2.6e-25 119.0 128 58.6
BraA09t40924Z Brassica rapa HOM05D004388 ORTHO05D005106 2.6e-25 119.0 128 58.6
Glyma.04G035900 Glycine max HOM05D004388 ORTHO05D005106 2.6e-25 119.0 124 59.7
PSO541G0781 Papaver somniferum HOM05D004388 ORTHO05D005106 2.6e-25 119.0 125 58.4
PSO170G0356 Papaver somniferum HOM05D004388 ORTHO05D005106 4.4e-25 118.2 124 58.9
Phvul.009G061900 Phaseolus vulgaris HOM05D004388 ORTHO05D005106 4.4e-25 118.2 127 58.3
ATR0733G197 Amborella trichopoda HOM05D004388 ORTHO05D005106 5.7e-25 117.9 125 60.0
FAN20G1062 Fragaria x ananassa HOM05D004388 ORTHO05D005106 7.5e-25 117.5 100 62.0
PGR042G3241 Punica granatum HOM05D004388 ORTHO05D005106 9.7e-25 117.1 121 61.2
SalBow6G5992 Salvia bowleyana HOM05D004388 ORTHO05D005106 9.7e-25 117.1 113 61.1
unitig_744.g24243 Utricularia gibba HOM05D004388 ORTHO05D005106 9.7e-25 117.1 123 58.5
unitig_21.g20762 Utricularia gibba HOM05D004388 ORTHO05D005106 1.3e-24 116.7 123 58.5
VMungo1309G1869 Vigna mungo HOM05D004388 ORTHO05D005106 1.7e-24 116.3 124 55.6
PGSC0003DMG402025831 Solanum tuberosum HOM05D004388 ORTHO05D005106 2.8e-24 115.5 126 56.3
TWI56G1138 Tripterygium wilfordii HOM05D004388 ORTHO05D005106 2.8e-24 115.5 127 56.7
Solyc01g109040.4 Solanum lycopersicum HOM05D004388 ORTHO05D005106 3.7e-24 115.2 126 56.3
CARHR118500 Cardamine hirsuta HOM05D004388 ORTHO05D005106 6.3e-24 114.4 128 55.5
Aa31LG5G9370 Aethionema arabicum HOM05D004388 ORTHO05D005106 8.2e-24 114.0 124 58.9
Lalb_Chr08g0245721 Lupinus albus HOM05D004388 ORTHO05D005106 8.2e-24 114.0 124 52.4
Aqoxy6G00936 Aquilegia oxysepala HOM05D004388 ORTHO05D005106 2.4e-23 112.5 125 57.6
Sopen01g051240 Solanum pennellii HOM05D004388 ORTHO05D005106 2.4e-23 112.5 126 55.6
arahy.Tifrunner.gnm1.ann1.2I4SWN Arachis hypogaea HOM05D004388 ORTHO05D005106 1.2e-22 110.2 129 54.3
Lj1g0026402 Lotus japonicus HOM05D004388 ORTHO05D005106 1.2e-22 110.2 128 53.9
Psat6g097040 Pisum sativum HOM05D004388 ORTHO05D005106 4.5e-22 108.2 128 50.8
Actinidia00479 Actinidia chinensis HOM05D000395 ORTHO05D005106 1.3e-21 106.7 120 53.3
unitig_0.g849 Utricularia gibba HOM05D004388 ORTHO05D005106 1.3e-21 106.7 125 56.0
SGA_v2.0_scaffold58G20597 Striga asiatica HOM05D004388 ORTHO05D005106 2.2e-21 105.9 125 53.6
Os03g0765900 Oryza sativa ssp. japonica HOM05D004388 ORTHO05D005106 8.5e-21 104.0 124 52.4
TWI12G0249 Tripterygium wilfordii HOM05D004388 ORTHO05D005106 1.5e-20 103.2 130 52.3
Rhsim05G0079000 Rhododendron simsii HOM05D004388 ORTHO05D005106 3.6e-19 98.6 124 49.2
TWI36G1636 Tripterygium wilfordii HOM05D004388 ORTHO05D005106 4.7e-19 98.2 129 50.4
HPP92_017776 Vanilla planifolia HOM05D004388 ORTHO05D005106 8.0e-19 97.4 123 54.5
Zm00001eb214080 Zea mays HOM05D004388 ORTHO05D005106 1.5e-17 93.2 119 48.7
Zm00001eb058590 Zea mays HOM05D004388 ORTHO05D005106 1.3e-16 90.1 124 46.8
Potri.002G130000 Populus trichocarpa HOM05D004388 ORTHO05D005106 1.1e-15 87.0 105 52.4
Pp3c5_10730 Physcomitrium patens HOM05D004388 ORTHO05D005106 4.5e-14 81.6 130 40.0
TPR.G40836 Trifolium pratense HOM05D004388 ORTHO05D005106 4.5e-14 81.6 73 63.0
Pp3c6_20300 Physcomitrium patens HOM05D004388 ORTHO05D005106 2.2e-13 79.3 123 38.2
Oeu010570.1 Olea europaea HOM05D000395 ORTHO05D000088 2.9e-13 79.0 103 48.5
AagrBONN_evm.TU.Sc2ySwM_228.5818 Anthoceros agrestis HOM05D004388 ORTHO05D005106 3.8e-13 78.6 89 47.2
BcaB08g35304 Brassica carinata HOM05D004388 ORTHO05D005106 3.8e-13 78.6 53 77.4
GSVIVG01031853001 Vitis vinifera HOM05D008110 ORTHO05D005106 1.1e-12 77.0 71 60.6
CDE01G0191 Ceratophyllum demersum HOM05D004388 ORTHO05D005106 1.5e-12 76.6 50 80.0
Psat4g068600 Pisum sativum HOM05D004388 ORTHO05D005106 2.5e-12 75.9 108 46.3
CBR_g48936 Chara braunii HOM05D004388 ORTHO05D005106 8.0e-11 70.9 126 42.1
SMO361G0239 Selaginella moellendorffii HOM05D004388 ORTHO05D005106 4.0e-10 68.6 118 38.1
Mapoly0043s0110 Marchantia polymorpha HOM05D004388 ORTHO05D005106 1.2e-09 67.0 122 39.3
Actinidia12967 Actinidia chinensis HOM05D008110 ORTHO05D000088 4.5e-06 55.1 71 45.1


User provided reference genes

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