Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib248G0105 Durio zibethinus HOM05D005556 ORTHO05D006304 2.4e-78 295.4 149 100.0
Duzib132G0943 Durio zibethinus HOM05D005556 ORTHO05D006304 7.8e-29 131.0 178 48.3
Thecc.02G035400 Theobroma cacao HOM05D005556 ORTHO05D006304 1.3e-28 130.2 178 48.3
COL.COLO4_17842 Corchorus olitorius HOM05D005556 ORTHO05D006304 8.7e-28 127.5 178 47.2
Gohir.D12G041100 Gossypium hirsutum HOM05D005556 ORTHO05D006304 1.5e-27 126.7 178 47.8
Gorai.008G042900 Gossypium raimondii HOM05D005556 ORTHO05D006304 1.5e-27 126.7 178 47.8
Gohir.A12G031200 Gossypium hirsutum HOM05D005556 ORTHO05D006304 1.9e-27 126.3 178 47.8
CiPaw.06G161400 Carya illinoinensis HOM05D005556 ORTHO05D006304 9.6e-27 124.0 183 45.9
COL.COLO4_17843 Corchorus olitorius HOM05D005556 ORTHO05D006304 2.8e-26 122.5 141 49.6
Nitab4.5_0001477g0210 Nicotiana tabacum HOM05D005556 ORTHO05D006304 2.8e-26 122.5 142 50.7
Nitab4.5_0012619g0020 Nicotiana tabacum HOM05D005556 ORTHO05D006304 3.6e-26 122.1 161 45.3
Cfa004765 Carpinus fangiana HOM05D005556 ORTHO05D006304 6.2e-26 121.3 147 49.7
Haze_10362 Corylus avellana HOM05D005556 ORTHO05D006304 6.2e-26 121.3 147 50.3
Manes.07G048500 Manihot esculenta HOM05D005556 ORTHO05D006304 6.2e-26 121.3 181 45.3
Manes.10G090900 Manihot esculenta HOM05D005556 ORTHO05D006304 6.2e-26 121.3 175 46.3
GSVIVG01036958001 Vitis vinifera HOM05D005556 ORTHO05D006304 6.2e-26 121.3 142 50.7
Dinv16044 Davidia involucrata HOM05D005556 ORTHO05D006304 8.1e-26 120.9 142 50.7
CANSAT25G0859 Cannabis sativa HOM05D005556 ORTHO05D006304 1.4e-25 120.2 179 45.3
Ciclev10028842m.g Citrus clementina HOM05D005556 ORTHO05D006304 1.4e-25 120.2 142 50.7
CsaV3_7G007220 Cucumis sativus L. HOM05D005556 ORTHO05D006304 1.4e-25 120.2 178 46.1
DCAR_021917 Daucus carota HOM05D005556 ORTHO05D006304 1.4e-25 120.2 178 44.4
Medtr4g092750 Medicago truncatula HOM05D005556 ORTHO05D006304 1.4e-25 120.2 142 49.3
CSS0007132 Camellia sinensis var. sinensis HOM05D005556 ORTHO05D006304 1.8e-25 119.8 69 82.6
CSS0048948 Camellia sinensis var. sinensis HOM05D005556 ORTHO05D006304 1.8e-25 119.8 69 82.6
TWI23G1245 Tripterygium wilfordii HOM05D005556 ORTHO05D006304 1.8e-25 119.8 142 50.0
Cpa.g.sc20.62 Carica papaya HOM05D005556 ORTHO05D006304 2.4e-25 119.4 175 46.3
MELO3C018576.2 Cucumis melo HOM05D005556 ORTHO05D006304 2.4e-25 119.4 178 46.1
Potri.001G287100 Populus trichocarpa HOM05D005556 ORTHO05D006304 2.4e-25 119.4 178 46.1
Atru.BG.46.p Acer truncatum HOM05D005556 ORTHO05D006304 3.1e-25 119.0 155 46.5
Rhsim11G0145300 Rhododendron simsii HOM05D005556 ORTHO05D006304 3.1e-25 119.0 142 50.0
Sabra16G0179600 Salix brachista HOM05D005556 ORTHO05D006304 3.1e-25 119.0 178 46.1
TPR.G16873 Trifolium pratense HOM05D005556 ORTHO05D006304 3.1e-25 119.0 142 49.3
Actinidia02420 Actinidia chinensis HOM05D005556 ORTHO05D006304 4.0e-25 118.6 178 45.5
FvH4_2g02330 Fragaria vesca HOM05D005556 ORTHO05D006304 4.0e-25 118.6 178 45.5
Peaxi162Scf00299g00339 Petunia axillaris HOM05D005556 ORTHO05D006304 4.0e-25 118.6 161 44.7
QL11p027090 Quercus lobata HOM05D005556 ORTHO05D006304 4.0e-25 118.6 142 50.0
Solyc01g106450.3 Solanum lycopersicum HOM05D005556 ORTHO05D006304 5.2e-25 118.2 142 48.6
PGSC0003DMG400003102 Solanum tuberosum HOM05D005556 ORTHO05D006304 5.2e-25 118.2 142 48.6
Migut.B00506 Erythranthe guttata HOM05D005556 ORTHO05D006304 9.0e-25 117.5 142 48.6
FAN27G0195 Fragaria x ananassa HOM05D005556 ORTHO05D006304 9.0e-25 117.5 178 44.9
HanXRQChr09g0250811 Helianthus annuus HOM05D005556 ORTHO05D006304 9.0e-25 117.5 178 44.4
SalBow6G1008 Salvia bowleyana HOM05D005556 ORTHO05D006304 9.0e-25 117.5 142 47.2
ClCG02G007540 Citrullus lanatus HOM05D005556 ORTHO05D006304 1.2e-24 117.1 69 81.2
arahy.Tifrunner.gnm1.ann1.ASR1GR Arachis hypogaea HOM05D005556 ORTHO05D006304 1.5e-24 116.7 142 47.9
arahy.Tifrunner.gnm1.ann1.GBZ5J5 Arachis hypogaea HOM05D005556 ORTHO05D006304 1.5e-24 116.7 142 47.9
Cc02_g20430 Coffea canephora HOM05D005556 ORTHO05D006304 1.5e-24 116.7 175 45.7
FAN20G2516 Fragaria x ananassa HOM05D005556 ORTHO05D006304 1.5e-24 116.7 68 80.9
Potri.009G081300 Populus trichocarpa HOM05D005556 ORTHO05D006304 1.5e-24 116.7 178 45.5
Sed0016178 Sechium edule HOM05D005556 ORTHO05D006304 1.5e-24 116.7 178 44.9
vmacro01911 Vaccinium macrocarpon HOM05D005556 ORTHO05D006304 1.5e-24 116.7 142 48.6
Psat7g103600 Pisum sativum HOM05D005556 ORTHO05D006304 2.6e-24 115.9 142 48.6
Sopen01g048820 Solanum pennellii HOM05D005556 ORTHO05D006304 2.6e-24 115.9 142 47.9
AL7G17810 Arabidopsis lyrata HOM05D005556 ORTHO05D006304 3.4e-24 115.5 178 43.3
CAN.G504.63 Capsicum annuum HOM05D005556 ORTHO05D006304 3.4e-24 115.5 142 47.9
FAN15G0833 Fragaria x ananassa HOM05D005556 ORTHO05D006304 3.4e-24 115.5 178 44.4
FAN24G1262 Fragaria x ananassa HOM05D005556 ORTHO05D006304 3.4e-24 115.5 178 44.4
Nn5g29135 Nelumbo nucifera HOM05D005556 ORTHO05D006304 3.4e-24 115.5 178 44.9
AT4G33670 Arabidopsis thaliana HOM05D005556 ORTHO05D006304 4.4e-24 115.2 178 43.3
CDE04G2170 Ceratophyllum demersum HOM05D005556 ORTHO05D006304 4.4e-24 115.2 69 76.8
Sp7g31400 Schrenkiella parvula HOM05D005556 ORTHO05D006304 4.4e-24 115.2 178 43.8
Dinv09497 Davidia involucrata HOM05D005556 ORTHO05D006304 5.8e-24 114.8 178 44.9
MBI16_g35805_MAGBIO Magnolia biondii HOM05D005556 ORTHO05D006304 5.8e-24 114.8 69 79.7
Aqoxy6G00609 Aquilegia oxysepala HOM05D005556 ORTHO05D006304 7.6e-24 114.4 178 43.3
Ca_18422_v3 Cicer arietinum L. HOM05D005556 ORTHO05D006304 7.6e-24 114.4 142 47.9
Ca_18437_v3 Cicer arietinum L. HOM05D005556 ORTHO05D006304 7.6e-24 114.4 142 47.9
MD10G1115600 Malus domestica HOM05D005556 ORTHO05D006304 7.6e-24 114.4 78 69.2
BcaNung02190 Brassica carinata HOM05D005556 ORTHO05D006304 9.9e-24 114.0 178 42.7
A03p62160 Brassica napus HOM05D005556 ORTHO05D006304 9.9e-24 114.0 178 42.7
C07p59820 Brassica napus HOM05D005556 ORTHO05D006304 9.9e-24 114.0 178 42.7
BraA03t15255Z Brassica rapa HOM05D005556 ORTHO05D006304 9.9e-24 114.0 178 43.3
PGR042G0433 Punica granatum HOM05D005556 ORTHO05D006304 9.9e-24 114.0 178 44.4
RcHm_v2.0_Chr6g0246091 Rosa chinensis HOM05D005556 ORTHO05D006304 9.9e-24 114.0 178 43.8
Aa31sc730G30 Aethionema arabicum HOM05D005556 ORTHO05D006304 1.3e-23 113.6 178 43.8
ATR0767G112 Amborella trichopoda HOM05D005556 ORTHO05D006304 1.3e-23 113.6 69 76.8
Lalb_Chr09g0327041 Lupinus albus HOM05D005556 ORTHO05D006304 1.3e-23 113.6 69 75.4
AUR62027065 Chenopodium quinoa HOM05D005556 ORTHO05D006304 1.7e-23 113.2 178 43.3
SGA_v2.0_scaffold342G49419 Striga asiatica HOM05D005556 ORTHO05D006304 2.2e-23 112.8 142 47.9
Lj4g0008817 Lotus japonicus HOM05D005556 ORTHO05D006304 2.9e-23 112.5 142 45.8
Phvul.002G216600 Phaseolus vulgaris HOM05D005556 ORTHO05D006304 2.9e-23 112.5 145 46.9
Thhalv10025723m.g Eutrema salsugineum HOM05D005556 ORTHO05D006304 3.8e-23 112.1 178 43.8
Oeu059877.1 Olea europaea HOM05D005556 ORTHO05D006304 3.8e-23 112.1 69 75.4
Ah.01g024290 Amaranthus hybridus HOM05D005556 ORTHO05D006304 4.9e-23 111.7 178 42.7
BcaB03g12782 Brassica carinata HOM05D005556 ORTHO05D006304 4.9e-23 111.7 147 46.3
THA.LOC104807192 Tarenaya hassleriana HOM05D005556 ORTHO05D006304 4.9e-23 111.7 175 42.3
HPP92_007724 Vanilla planifolia HOM05D005556 ORTHO05D006304 4.9e-23 111.7 68 77.9
AUR62013157 Chenopodium quinoa HOM05D005556 ORTHO05D006304 8.4e-23 110.9 178 42.1
AUR62030906 Chenopodium quinoa HOM05D005556 ORTHO05D006304 8.4e-23 110.9 178 42.1
Eucgr.G01120 Eucalyptus grandis HOM05D005556 ORTHO05D006304 8.4e-23 110.9 175 42.9
SEGI_28357 Sequoiadendron giganteum HOM05D005556 ORTHO05D006304 8.4e-23 110.9 142 45.8
MSTRG.16652 Avicennia marina HOM05D005556 ORTHO05D006304 1.1e-22 110.5 178 42.7
BolC7t46427H Brassica oleracea HOM05D005556 ORTHO05D006304 1.1e-22 110.5 178 42.1
CARHR241760 Cardamine hirsuta HOM05D005556 ORTHO05D006304 1.1e-22 110.5 178 41.6
ECA240G4430 Erigeron canadensis HOM05D005556 ORTHO05D006304 1.4e-22 110.2 178 43.8
Hma1.2p1_0435F.1_g152480 Hydrangea macrophylla HOM05D005556 ORTHO05D006304 1.4e-22 110.2 178 44.4
vmacro20270 Vaccinium macrocarpon HOM05D005556 ORTHO05D006304 1.4e-22 110.2 72 73.6
Glyma.08G064100 Glycine max HOM05D005556 ORTHO05D006304 1.9e-22 109.8 142 45.8
Lsat_1_v5_gn_9_114260 Lactuca sativa HOM05D005556 ORTHO05D006304 2.4e-22 109.4 178 42.7
Sc08g0004230 Simmondsia chinensis HOM05D005556 ORTHO05D006304 2.4e-22 109.4 178 42.7
VMungo0251G3662 Vigna mungo HOM05D005556 ORTHO05D006304 2.4e-22 109.4 142 46.5
Prupe.8G157600 Prunus persica HOM05D005556 ORTHO05D006304 3.2e-22 109.0 178 41.6
unitig_21.g20707 Utricularia gibba HOM05D005556 ORTHO05D006304 3.2e-22 109.0 196 40.8
Hund06487 Selenicereus undatus HOM05D005556 ORTHO05D006304 4.2e-22 108.6 178 41.0
TAR628G0311 Trochodendron aralioides HOM05D005556 ORTHO05D006304 4.2e-22 108.6 197 40.1
Carub.0007s0675 Capsella rubella HOM05D005556 ORTHO05D006304 5.4e-22 108.2 178 41.6
A08p17470 Brassica napus HOM05D005556 ORTHO05D006304 9.3e-22 107.5 160 42.5
BraA08t33702Z Brassica rapa HOM05D002023 ORTHO05D002049 9.3e-22 107.5 160 42.5
PSO210G4879 Papaver somniferum HOM05D005556 ORTHO05D006304 9.3e-22 107.5 69 69.6
PSO761G0683 Papaver somniferum HOM05D005556 ORTHO05D006304 9.3e-22 107.5 69 69.6
AagrBONN_evm.TU.Sc2ySwM_228.863 Anthoceros agrestis HOM05D005556 ORTHO05D006304 1.2e-21 107.1 69 69.6
MD05G1113100 Malus domestica HOM05D005556 ORTHO05D006304 1.6e-21 106.7 178 41.0
Os12g0482700 Oryza sativa ssp. japonica HOM05D005556 ORTHO05D006304 1.6e-21 106.7 113 49.6
Mapoly0002s0285 Marchantia polymorpha HOM05D005556 ORTHO05D006304 2.7e-21 105.9 77 64.9
AagrBONN_evm.TU.Sc2ySwM_117.3957 Anthoceros agrestis HOM05D005556 ORTHO05D006304 6.0e-21 104.8 69 68.1
EL10Ac9g22141 Beta vulgaris HOM05D005556 ORTHO05D006304 6.0e-21 104.8 178 41.0
SMO164G0219 Selaginella moellendorffii HOM05D005556 ORTHO05D006304 2.3e-20 102.8 74 67.6
Zm00001eb408730 Zea mays HOM05D005556 ORTHO05D006304 2.3e-20 102.8 69 69.6
SMO164G0102 Selaginella moellendorffii HOM05D005556 ORTHO05D006304 8.7e-20 100.9 74 66.2
Pp3c7_4940 Physcomitrium patens HOM05D005556 ORTHO05D006304 1.9e-19 99.8 69 66.7
SHI04909 Sapria himalayana HOM05D005556 ORTHO05D006304 1.8e-17 93.2 142 43.0
Pp3c1_9660 Physcomitrium patens HOM05D005556 ORTHO05D006304 1.5e-16 90.1 69 58.0
CBR_g34727 Chara braunii HOM05D005556 ORTHO05D006304 5.8e-16 88.2 69 58.0
Eucgr.G01122 Eucalyptus grandis HOM05D005556 ORTHO05D006304 9.9e-16 87.4 161 39.8
Cre14.g630400 Chlamydomonas reinhardtii HOM05D005556 ORTHO05D006304 7.1e-14 81.3 69 50.7
C03p86470 Brassica napus HOM05D005556 ORTHO05D006304 2.7e-13 79.3 116 45.7
BolC3t20939H Brassica oleracea HOM05D002023 ORTHO05D002049 2.7e-13 79.3 116 45.7
vmacro05715 Vaccinium macrocarpon HOM05D005556 ORTHO05D006304 1.1e-11 73.9 48 68.8
Lj5A224G46 Lonicera japonica HOM05D005556 ORTHO05D006304 2.8e-10 69.3 74 52.7
BcaC01g00970 Brassica carinata HOM05D005556 ORTHO05D006304 1.5e-08 63.5 90 46.7


User provided reference genes

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