Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib235G1194 Durio zibethinus HOM05D006486 ORTHO05D007888 3.9e-126 454.9 247 100.0
Thecc.06G199700 Theobroma cacao HOM05D006486 ORTHO05D007888 4.2e-96 355.1 249 80.3
COL.COLO4_31586 Corchorus olitorius HOM05D006486 ORTHO05D007888 1.9e-80 303.1 230 75.7
Gohir.D10G021800 Gossypium hirsutum HOM05D006486 ORTHO05D007888 1.5e-64 250.4 247 63.2
Gohir.A10G021000 Gossypium hirsutum HOM05D006486 ORTHO05D007888 3.3e-64 249.2 247 62.8
Gorai.011G022900 Gossypium raimondii HOM05D006486 ORTHO05D007888 7.3e-64 248.1 247 62.8
Gohir.D06G211933 Gossypium hirsutum HOM05D006486 ORTHO05D007888 7.3e-48 194.9 249 56.6
Gorai.010G254200 Gossypium raimondii HOM05D006486 ORTHO05D007888 9.6e-48 194.5 249 57.4
Cpa.g.sc27.128 Carica papaya HOM05D006486 ORTHO05D007888 4.7e-47 192.2 267 49.8
TWI63G1620 Tripterygium wilfordii HOM05D006486 ORTHO05D007888 2.6e-45 186.4 249 51.8
Gohir.D09G070600 Gossypium hirsutum HOM05D006486 ORTHO05D007888 2.3e-41 173.3 244 53.7
Gorai.006G085300 Gossypium raimondii HOM05D006486 ORTHO05D007888 2.3e-41 173.3 244 53.7
Glyma.15G067400 Glycine max HOM05D006486 ORTHO05D007888 4.3e-40 169.1 257 47.1
Manes.16G020500 Manihot esculenta HOM05D006486 ORTHO05D007888 8.1e-39 164.9 256 48.0
TPR.G36802 Trifolium pratense HOM05D006486 ORTHO05D007888 8.1e-39 164.9 242 47.5
TAR624G1400 Trochodendron aralioides HOM05D006486 ORTHO05D007888 8.1e-39 164.9 232 50.0
Cfa000350 Carpinus fangiana HOM05D006486 ORTHO05D007888 1.1e-38 164.5 257 48.2
Potri.011G042600 Populus trichocarpa HOM05D006486 ORTHO05D007888 1.8e-38 163.7 282 46.8
GSVIVG01003184001 Vitis vinifera HOM05D006486 ORTHO05D007888 1.8e-38 163.7 225 54.2
Haze_06575 Corylus avellana HOM05D006486 ORTHO05D007888 2.4e-38 163.3 252 49.6
Manes.17G039100 Manihot esculenta HOM05D006486 ORTHO05D007888 4.0e-38 162.5 255 49.8
arahy.Tifrunner.gnm1.ann1.3M60GY Arachis hypogaea HOM05D006486 ORTHO05D007888 9.0e-38 161.4 238 47.9
Haze_06576 Corylus avellana HOM05D006486 ORTHO05D007888 1.5e-37 160.6 252 49.2
Atru.chr10.2014 Acer truncatum HOM05D006486 ORTHO05D007888 2.0e-37 160.2 267 44.2
Lalb_Chr20g0122301 Lupinus albus HOM05D006486 ORTHO05D007888 2.6e-37 159.8 235 49.8
RcHm_v2.0_Chr5g0006301 Rosa chinensis HOM05D006486 ORTHO05D007888 4.4e-37 159.1 239 49.0
CiPaw.09G157800 Carya illinoinensis HOM05D006486 ORTHO05D007888 7.6e-37 158.3 255 46.3
Lj4g0025313 Lotus japonicus HOM05D006486 ORTHO05D007888 9.9e-37 157.9 248 48.0
Sabra11G0029300 Salix brachista HOM05D006486 ORTHO05D007888 1.3e-36 157.5 281 46.3
Glyma.13G246500 Glycine max HOM05D006486 ORTHO05D007888 1.7e-36 157.1 257 45.1
arahy.Tifrunner.gnm1.ann1.4FF3SU Arachis hypogaea HOM05D006486 ORTHO05D007888 2.2e-36 156.8 238 47.9
Ciclev10016271m.g Citrus clementina HOM05D006486 ORTHO05D007888 2.2e-36 156.8 231 49.4
Medtr4g091220 Medicago truncatula HOM05D006486 ORTHO05D007888 4.9e-36 155.6 262 45.8
Medtr2g011760 Medicago truncatula HOM05D006486 ORTHO05D007888 6.4e-36 155.2 239 49.0
QL04p018235 Quercus lobata HOM05D006486 ORTHO05D007888 8.4e-36 154.8 251 49.4
Phvul.006G192300 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 1.9e-35 153.7 260 45.8
MD05G1325600 Malus domestica HOM05D006486 ORTHO05D007888 5.4e-35 152.1 288 45.8
CSS0009661 Camellia sinensis var. sinensis HOM05D006486 ORTHO05D007888 9.3e-35 151.4 225 51.1
Nn1g06762 Nelumbo nucifera HOM05D006486 ORTHO05D007888 1.2e-34 151.0 232 49.1
Ca_00252_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 1.6e-34 150.6 247 47.0
Prupe.4G037000 Prunus persica HOM05D006486 ORTHO05D007888 2.7e-34 149.8 276 43.8
Cc02_g12410 Coffea canephora HOM05D006486 ORTHO05D007888 4.6e-34 149.1 213 48.8
THA.LOC104812719 Tarenaya hassleriana HOM05D006486 ORTHO05D007888 4.6e-34 149.1 221 47.1
Nn1g03891 Nelumbo nucifera HOM05D006486 ORTHO05D007888 1.0e-33 147.9 241 45.6
FAN16G2112 Fragaria x ananassa HOM05D006486 ORTHO05D007888 1.3e-33 147.5 250 46.0
AL7G32570 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 3.0e-33 146.4 233 46.4
TPR.G25690 Trifolium pratense HOM05D006486 ORTHO05D007888 1.5e-32 144.1 231 49.4
Lj6g0020154 Lotus japonicus HOM05D006486 ORTHO05D007888 4.3e-32 142.5 231 48.1
FAN25G3184 Fragaria x ananassa HOM05D006486 ORTHO05D007888 9.6e-32 141.4 250 43.6
FvH4_3g03970 Fragaria vesca HOM05D006486 ORTHO05D007888 1.3e-31 141.0 249 44.2
FAN11G1020 Fragaria x ananassa HOM05D006486 ORTHO05D007888 1.3e-31 141.0 249 44.2
MSTRG.7289 Avicennia marina HOM05D006486 ORTHO05D007888 2.8e-31 139.8 222 46.4
Rhsim02G0119500 Rhododendron simsii HOM05D006486 ORTHO05D007888 2.8e-31 139.8 281 40.9
Potri.004G034200 Populus trichocarpa HOM05D006486 ORTHO05D007888 3.6e-31 139.4 270 45.2
VMungo0540G0810 Vigna mungo HOM05D006486 ORTHO05D007888 3.6e-31 139.4 258 41.9
MD10G1303500 Malus domestica HOM05D006486 ORTHO05D007888 6.2e-31 138.7 288 42.4
FAN21G2539 Fragaria x ananassa HOM05D006486 ORTHO05D007888 1.1e-30 137.9 250 44.0
Actinidia24058 Actinidia chinensis HOM05D006486 ORTHO05D007888 2.4e-30 136.7 187 51.9
Oeu014709.1 Olea europaea HOM05D006486 ORTHO05D007888 2.4e-30 136.7 217 46.1
Psat1g208760 Pisum sativum HOM05D006486 ORTHO05D007888 2.4e-30 136.7 228 46.1
BcaNung02794 Brassica carinata HOM05D006486 ORTHO05D007888 5.3e-30 135.6 226 42.9
SGA_v2.0_scaffold7G03946 Striga asiatica HOM05D006486 ORTHO05D007888 6.9e-30 135.2 228 47.8
Sabra04G0019900 Salix brachista HOM05D006486 ORTHO05D007888 9.0e-30 134.8 239 46.4
Aqoxy1G03879 Aquilegia oxysepala HOM05D006486 ORTHO05D007888 1.2e-29 134.4 246 44.7
BolC1t01497H Brassica oleracea HOM05D006486 ORTHO05D007888 1.2e-29 134.4 225 42.7
Migut.M01215 Erythranthe guttata HOM05D006486 ORTHO05D007888 1.2e-29 134.4 212 48.1
A01p12810 Brassica napus HOM05D006486 ORTHO05D007888 1.5e-29 134.0 224 43.8
PGSC0003DMG400022406 Solanum tuberosum HOM05D006486 ORTHO05D007888 2.0e-29 133.7 258 40.3
Psat7g109320 Pisum sativum HOM05D006486 ORTHO05D007888 2.6e-29 133.3 234 43.2
CARHR228160 Cardamine hirsuta HOM05D006486 ORTHO05D007888 4.5e-29 132.5 229 43.7
Glyma.08G059200 Glycine max HOM05D006486 ORTHO05D007888 5.8e-29 132.1 250 43.2
AT4G21500 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 1.3e-28 131.0 222 45.0
Solyc02g079160.2 Solanum lycopersicum HOM05D006486 ORTHO05D007888 1.7e-28 130.6 259 40.5
TAR629G2100 Trochodendron aralioides HOM05D006486 ORTHO05D007888 2.9e-28 129.8 229 44.1
C01p15430 Brassica napus HOM05D006486 ORTHO05D007888 3.8e-28 129.4 225 41.8
Oeu059548.1 Olea europaea HOM05D006486 ORTHO05D007888 4.9e-28 129.0 212 45.8
Thhalv10026096m.g Eutrema salsugineum HOM05D006486 ORTHO05D007888 6.4e-28 128.6 233 42.5
Peaxi162Scf00083g00023 Petunia axillaris HOM05D006486 ORTHO05D007888 3.2e-27 126.3 230 43.0
Sed0019218 Sechium edule HOM05D006486 ORTHO05D007888 5.5e-27 125.6 232 42.2
Ca_18481_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 9.3e-27 124.8 165 47.9
Nitab4.5_0000190g0060 Nicotiana tabacum HOM05D006486 ORTHO05D007888 9.3e-27 124.8 281 39.5
Carub.0007s1992 Capsella rubella HOM05D006486 ORTHO05D007888 2.1e-26 123.6 232 42.7
Sopen02g023960 Solanum pennellii HOM05D006486 ORTHO05D007888 2.1e-26 123.6 256 39.8
ClCG01G022550 Citrullus lanatus HOM05D006486 ORTHO05D007888 3.5e-26 122.9 224 43.8
MSTRG.15936 Avicennia marina HOM05D006486 ORTHO05D007888 4.6e-26 122.5 226 44.7
BraA01t01225Z Brassica rapa HOM05D006486 ORTHO05D007888 6.0e-26 122.1 241 39.8
CANSAT56G1095 Cannabis sativa HOM05D006486 ORTHO05D007888 1.8e-25 120.6 275 38.5
PGR004G0715 Punica granatum HOM05D006486 ORTHO05D007888 1.8e-25 120.6 238 41.2
Nitab4.5_0006573g0010 Nicotiana tabacum HOM05D006486 ORTHO05D007888 3.9e-25 119.4 284 37.7
Aa31LG6G3500 Aethionema arabicum HOM05D006486 ORTHO05D007888 5.1e-25 119.0 252 40.5
CsaV3_6G049740 Cucumis sativus L. HOM05D006486 ORTHO05D007888 5.1e-25 119.0 233 41.6
Lj1P1213T18 Lonicera japonica HOM05D006486 ORTHO05D007888 3.3e-24 116.3 139 51.8
MELO3C007322.2 Cucumis melo HOM05D006486 ORTHO05D007888 3.7e-23 112.8 223 41.7
Actinidia11810 Actinidia chinensis HOM05D006486 ORTHO05D007888 4.8e-23 112.5 170 45.3
Oeu043421.1 Olea europaea HOM05D006486 ORTHO05D007888 6.2e-23 112.1 218 39.9
Nitab4.5_0002222g0020 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.4e-22 110.9 247 39.3
Sp7g19620 Schrenkiella parvula HOM05D006486 ORTHO05D007888 1.8e-22 110.5 239 43.5
SalBow8G4438 Salvia bowleyana HOM05D006486 ORTHO05D007888 2.0e-21 107.1 208 43.3
Oeu030052.1 Olea europaea HOM05D006486 ORTHO05D007888 7.6e-21 105.1 185 43.8
HanXRQChr16g0517421 Helianthus annuus HOM05D006486 ORTHO05D007888 3.2e-19 99.8 290 34.8
PSO832G0007 Papaver somniferum HOM05D006486 ORTHO05D007888 4.2e-19 99.4 247 36.0
PSO210G7027 Papaver somniferum HOM05D006486 ORTHO05D007888 3.5e-18 96.3 247 35.6
Phvul.002G221700 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 1.3e-17 94.4 243 36.6
DCAR_004139 Daucus carota HOM05D006486 ORTHO05D007888 3.0e-17 93.2 185 41.6
HanXRQChr08g0224091 Helianthus annuus HOM05D006486 ORTHO05D007888 3.0e-17 93.2 336 31.2
CDE05G2620 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 8.7e-17 91.7 252 36.9
CDE05G2026 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 4.3e-16 89.4 123 48.8
Lsat_1_v5_gn_4_56921 Lactuca sativa HOM05D006486 ORTHO05D007888 9.6e-16 88.2 121 46.3
VMungo0251G3177 Vigna mungo HOM05D006486 ORTHO05D007888 9.6e-16 88.2 246 34.1
ECA234G0536 Erigeron canadensis HOM05D006486 ORTHO05D007888 1.3e-15 87.8 126 45.2
Sed0006081 Sechium edule HOM05D006486 ORTHO05D007888 4.8e-15 85.9 119 47.1
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 1.4e-14 84.3 193 37.8
EL10Ac8g20532 Beta vulgaris HOM05D006486 ORTHO05D007888 6.9e-14 82.0 308 31.8
Oeu051330.1 Olea europaea HOM05D006486 ORTHO05D007888 4.5e-13 79.3 74 56.8
Sc24g0000710 Simmondsia chinensis HOM05D006486 ORTHO05D007888 1.9e-11 73.9 94 48.9
AT4G05018 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 3.0e-09 66.6 204 32.8
HPP92_012357 Vanilla planifolia HOM05D006486 ORTHO05D007888 3.9e-09 66.2 223 35.4
Ah.09g236140 Amaranthus hybridus HOM05D006486 ORTHO05D007888 1.5e-08 64.3 159 37.1
ATR0693G170 Amborella trichopoda HOM05D006486 ORTHO05D007888 4.3e-08 62.8 138 39.1
Nitab4.5_0001007g0050 Nicotiana tabacum HOM05D006486 ORTHO05D007888 8.2e-07 58.5 247 29.6


User provided reference genes

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