Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib212G0230 Durio zibethinus HOM05D006670 ORTHO05D008715 1.5e-150 536.2 282 100.0
Thecc.04G214700 Theobroma cacao HOM05D006670 ORTHO05D008715 1.5e-129 466.5 273 89.0
COL.COLO4_05724 Corchorus olitorius HOM05D006670 ORTHO05D008715 2.6e-126 455.7 273 87.2
Gorai.011G163000 Gossypium raimondii HOM05D006670 ORTHO05D008715 1.8e-122 443.0 274 84.3
Gohir.D10G145900 Gossypium hirsutum HOM05D006670 ORTHO05D008715 5.1e-122 441.4 274 83.9
Gohir.A10G120500 Gossypium hirsutum HOM05D006670 ORTHO05D008715 5.7e-121 438.0 274 83.2
RcHm_v2.0_Chr4g0396631 Rosa chinensis HOM05D006670 ORTHO05D008715 4.1e-111 405.2 273 77.3
Ciclev10005609m.g Citrus clementina HOM05D006670 ORTHO05D008715 4.5e-110 401.7 270 75.6
FAN22G1637 Fragaria x ananassa HOM05D006670 ORTHO05D008715 1.7e-109 399.8 274 74.5
CiPaw.01G205600 Carya illinoinensis HOM05D006670 ORTHO05D008715 2.2e-109 399.4 272 76.8
MD13G1229700 Malus domestica HOM05D006670 ORTHO05D008715 2.9e-109 399.1 273 76.9
FvH4_4g05510 Fragaria vesca HOM05D006670 ORTHO05D008715 3.8e-109 398.7 274 75.2
FAN12G2738 Fragaria x ananassa HOM05D006670 ORTHO05D008715 1.4e-108 396.7 274 74.8
Manes.15G049800 Manihot esculenta HOM05D006670 ORTHO05D008715 1.4e-108 396.7 269 74.7
Prupe.1G056900 Prunus persica HOM05D006670 ORTHO05D008715 3.2e-108 395.6 273 75.5
QL06p022765 Quercus lobata HOM05D006670 ORTHO05D008715 7.2e-108 394.4 269 76.6
FAN07G0632 Fragaria x ananassa HOM05D006670 ORTHO05D008715 9.4e-108 394.0 274 74.5
Dinv27152 Davidia involucrata HOM05D006670 ORTHO05D008715 1.2e-107 393.7 266 76.3
Haze_11539 Corylus avellana HOM05D006670 ORTHO05D008715 2.1e-107 392.9 273 74.4
Manes.03G154700 Manihot esculenta HOM05D006670 ORTHO05D008715 3.6e-107 392.1 267 76.0
Cfa014868 Carpinus fangiana HOM05D006670 ORTHO05D008715 1.4e-106 390.2 273 74.0
CSS0047689 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 6.7e-106 387.9 273 73.3
Potri.003G174400 Populus trichocarpa HOM05D006670 ORTHO05D008715 1.1e-105 387.1 270 74.8
Sabra03G0127900 Salix brachista HOM05D006670 ORTHO05D008715 1.5e-105 386.7 270 74.1
TAR636G1307 Trochodendron aralioides HOM05D006670 ORTHO05D008715 9.7e-105 384.0 271 73.8
Aqoxy2G03824 Aquilegia oxysepala HOM05D006670 ORTHO05D008715 1.7e-104 383.3 273 73.3
BcaB06g26594 Brassica carinata HOM05D006670 ORTHO05D008715 8.2e-104 380.9 270 70.4
PGR083G1840 Punica granatum HOM05D006670 ORTHO05D008715 1.8e-103 379.8 274 71.9
MELO3C006346.2 Cucumis melo HOM05D006670 ORTHO05D008715 2.4e-103 379.4 270 71.9
DCAR_024309 Daucus carota HOM05D006670 ORTHO05D008715 3.1e-103 379.0 270 73.0
BolC7t41764H Brassica oleracea HOM05D006670 ORTHO05D008715 4.1e-103 378.6 271 70.5
Rhsim09G0047600 Rhododendron simsii HOM05D006670 ORTHO05D008715 4.1e-103 378.6 266 72.2
A07p08240 Brassica napus HOM05D006670 ORTHO05D008715 7.0e-103 377.9 271 72.0
CSS0048127 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 7.0e-103 377.9 273 71.4
Rhsim09G0046600 Rhododendron simsii HOM05D006670 ORTHO05D008715 7.0e-103 377.9 266 73.3
AT3G24030 Arabidopsis thaliana HOM05D006670 ORTHO05D008715 9.1e-103 377.5 270 70.7
HanXRQChr01g0022661 Helianthus annuus HOM05D006670 ORTHO05D008715 1.2e-102 377.1 269 71.0
Carub.0003s2449 Capsella rubella HOM05D006670 ORTHO05D008715 3.5e-102 375.6 270 71.1
CANSAT78G1187 Cannabis sativa HOM05D006670 ORTHO05D008715 4.5e-102 375.2 266 71.8
Lsat_1_v5_gn_0_4721 Lactuca sativa HOM05D006670 ORTHO05D008715 5.9e-102 374.8 267 71.2
CsaV3_3G011380 Cucumis sativus L. HOM05D006670 ORTHO05D008715 7.7e-102 374.4 270 71.1
BcaC06g35628 Brassica carinata HOM05D006670 ORTHO05D008715 1.0e-101 374.0 271 69.7
C07p12780 Brassica napus HOM05D006670 ORTHO05D008715 1.0e-101 374.0 271 69.7
Thhalv10002635m.g Eutrema salsugineum HOM05D006670 ORTHO05D008715 2.2e-101 372.9 268 69.8
Sed0004390 Sechium edule HOM05D006670 ORTHO05D008715 2.9e-101 372.5 270 71.1
BraA07t28607Z Brassica rapa HOM05D006670 ORTHO05D008715 6.5e-101 371.3 271 69.7
AL3G39350 Arabidopsis lyrata HOM05D006670 ORTHO05D008715 8.5e-101 370.9 270 69.6
Hund24851 Selenicereus undatus HOM05D006670 ORTHO05D008715 1.1e-100 370.5 269 69.1
CARHR100200 Cardamine hirsuta HOM05D006670 ORTHO05D008715 1.9e-100 369.8 270 68.9
ClCG05G003670 Citrullus lanatus HOM05D006670 ORTHO05D008715 2.5e-100 369.4 267 71.9
Sp3g21930 Schrenkiella parvula HOM05D006670 ORTHO05D008715 3.2e-100 369.0 270 69.3
Sc13g0002920 Simmondsia chinensis HOM05D006670 ORTHO05D008715 3.2e-100 369.0 271 69.0
Cpa.g.sc59.72 Carica papaya HOM05D006670 ORTHO05D008715 4.2e-100 368.6 270 71.5
MSTRG.4202 Avicennia marina HOM05D006670 ORTHO05D008715 1.2e-99 367.1 272 69.5
ECA248G0542 Erigeron canadensis HOM05D006670 ORTHO05D008715 1.6e-99 366.7 272 67.6
MBI10_g16834_MAGBIO Magnolia biondii HOM05D006670 ORTHO05D008715 2.7e-99 365.9 273 69.6
Migut.G00614 Erythranthe guttata HOM05D006670 ORTHO05D008715 3.0e-98 362.5 273 69.6
VMungo0720G2028 Vigna mungo HOM05D006670 ORTHO05D008715 6.7e-98 361.3 273 70.0
AUR62035928 Chenopodium quinoa HOM05D006670 ORTHO05D008715 8.8e-98 360.9 270 68.5
AUR62035321 Chenopodium quinoa HOM05D006670 ORTHO05D008715 1.1e-97 360.5 270 68.9
Glyma.10G127400 Glycine max HOM05D006670 ORTHO05D008715 1.5e-97 360.1 276 68.8
Phvul.007G238000 Phaseolus vulgaris HOM05D006670 ORTHO05D008715 1.5e-97 360.1 271 69.4
PSO063G6527 Papaver somniferum HOM05D006670 ORTHO05D008715 3.3e-97 359.0 272 68.4
PSO017G1158 Papaver somniferum HOM05D006670 ORTHO05D008715 5.7e-97 358.2 272 68.8
Eucgr.H02870 Eucalyptus grandis HOM05D006670 ORTHO05D008715 2.2e-96 356.3 272 71.0
Lalb_Chr01g0011161 Lupinus albus HOM05D006670 ORTHO05D008715 2.8e-96 355.9 267 72.3
vmacro00519 Vaccinium macrocarpon HOM05D006670 ORTHO05D008715 2.8e-96 355.9 323 61.6
arahy.Tifrunner.gnm1.ann1.CI907D Arachis hypogaea HOM05D006670 ORTHO05D008715 3.7e-96 355.5 275 69.5
Ah.04g153360 Amaranthus hybridus HOM05D006670 ORTHO05D008715 8.2e-96 354.4 264 69.7
Atru.chr4.1814 Acer truncatum HOM05D006670 ORTHO05D008715 1.1e-95 354.0 277 67.9
arahy.Tifrunner.gnm1.ann1.M1QCRY Arachis hypogaea HOM05D006670 ORTHO05D008715 1.1e-95 354.0 275 69.1
Sopen05g031980 Solanum pennellii HOM05D006670 ORTHO05D008715 4.1e-95 352.1 268 68.3
Lju414A3G25 Lonicera japonica HOM05D006670 ORTHO05D008715 2.0e-94 349.7 239 76.6
SGA_v2.0_scaffold57G20164 Striga asiatica HOM05D006670 ORTHO05D008715 2.0e-94 349.7 273 66.3
ATR0787G198 Amborella trichopoda HOM05D006670 ORTHO05D008715 1.3e-93 347.1 270 66.3
Peaxi162Scf00536g00711 Petunia axillaris HOM05D006670 ORTHO05D008715 1.3e-93 347.1 268 66.8
Psat6g047400 Pisum sativum HOM05D006670 ORTHO05D008715 1.7e-93 346.7 274 68.2
TPR.G11296 Trifolium pratense HOM05D006670 ORTHO05D008715 1.7e-93 346.7 272 68.4
Ca_11808_v3 Cicer arietinum L. HOM05D006670 ORTHO05D008715 2.9e-93 345.9 273 69.2
Lj6g0025132 Lotus japonicus HOM05D006670 ORTHO05D008715 2.9e-93 345.9 272 67.6
Medtr1g046510 Medicago truncatula HOM05D006670 ORTHO05D008715 5.0e-93 345.1 273 68.1
Medtr1g046790 Medicago truncatula HOM05D006670 ORTHO05D008715 8.5e-93 344.4 273 67.8
THA.LOC104808732 Tarenaya hassleriana HOM05D006670 ORTHO05D008715 1.9e-92 343.2 275 64.4
Actinidia25088 Actinidia chinensis HOM05D006670 ORTHO05D008715 2.3e-90 336.3 243 72.4
Nn3g19866 Nelumbo nucifera HOM05D006670 ORTHO05D008715 2.6e-89 332.8 232 75.0
GSVIVG01029032001 Vitis vinifera HOM05D006670 ORTHO05D008715 4.8e-88 328.6 223 76.7
Nitab4.5_0001769g0060 Nicotiana tabacum HOM05D006670 ORTHO05D008715 8.3e-88 327.8 271 63.8
Zm00001eb341310 Zea mays HOM05D006670 ORTHO05D008715 8.3e-88 327.8 281 62.3
Nitab4.5_0012036g0010 Nicotiana tabacum HOM05D006670 ORTHO05D008715 1.8e-87 326.6 271 64.2
SEGI_39672 Sequoiadendron giganteum HOM05D006670 ORTHO05D008715 4.1e-87 325.5 275 62.9
unitig_747.g21700 Utricularia gibba HOM05D006670 ORTHO05D008715 5.9e-86 321.6 396 47.5
Pp3c9_10780 Physcomitrium patens HOM05D006670 ORTHO05D008715 5.0e-85 318.5 266 60.9
SHI00002 Sapria himalayana HOM05D006670 ORTHO05D008715 1.6e-83 313.5 290 59.3
PGSC0003DMG400027217 Solanum tuberosum HOM05D006670 ORTHO05D008715 8.0e-83 311.2 240 67.5
Mapoly0087s0052 Marchantia polymorpha HOM05D006670 ORTHO05D008715 1.4e-82 310.5 273 59.3
Oeu022324.1 Olea europaea HOM05D006670 ORTHO05D008715 2.8e-80 302.8 240 65.4
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 8.3e-80 301.2 262 58.8
Cc03_g07080 Coffea canephora HOM05D006670 ORTHO05D008715 1.1e-79 300.8 224 69.2
SMO137G0262 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 2.9e-77 292.7 262 61.5
CDE01G0405 Ceratophyllum demersum HOM05D007853 ORTHO05D009873 7.2e-76 288.1 232 63.8
EL10Ac3g06772 Beta vulgaris HOM05D006670 ORTHO05D008715 6.4e-72 275.0 230 62.2
RhsimUnG0181700 Rhododendron simsii HOM05D006670 ORTHO05D008715 9.2e-71 271.2 266 56.0
SMO134G0250 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 2.3e-66 256.5 271 53.1
Cre06.g255350 Chlamydomonas reinhardtii HOM05D006670 ORTHO05D008715 2.4e-63 246.5 267 52.1
Dinv44414 Davidia involucrata HOM05D006670 ORTHO05D008715 4.1e-55 219.2 148 78.4
Psat7g020640 Pisum sativum HOM05D006670 ORTHO05D008715 4.3e-52 209.1 183 65.6
Psat4g139560 Pisum sativum HOM05D006670 ORTHO05D000720 1.9e-47 193.7 220 53.2
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.9e-47 193.7 138 70.3
Lju414A3G24 Lonicera japonica HOM05D006670 ORTHO05D008715 5.4e-47 192.2 181 60.2
CAN.G305.17 Capsicum annuum HOM05D006670 ORTHO05D008715 8.6e-45 184.9 155 60.6
CAN.G305.16 Capsicum annuum HOM05D006670 ORTHO05D008715 7.6e-41 171.8 135 68.1
Psat0s5229g0080 Pisum sativum HOM05D006670 ORTHO05D006513 9.9e-41 171.4 217 48.4
Potri.001G053900 Populus trichocarpa HOM05D006670 ORTHO05D008715 4.9e-40 169.1 120 73.3
Os01g0363600 Oryza sativa ssp. japonica HOM05D006670 ORTHO05D008715 1.2e-38 164.5 136 58.1
Psat4g139640 Pisum sativum HOM05D006670 ORTHO05D002176 8.4e-32 141.7 136 60.3
Sabra01G0038200 Salix brachista HOM05D006670 ORTHO05D349611 9.3e-31 138.3 207 44.4
Lsat_1_v5_gn_5_180420 Lactuca sativa HOM05D006670 ORTHO05D008715 7.9e-30 135.2 119 59.7
Migut.G00612 Erythranthe guttata HOM05D006670 ORTHO05D008715 1.5e-28 131.0 128 62.5
Cfa024720 Carpinus fangiana HOM05D005536 ORTHO05D006999 9.3e-23 111.7 248 33.5
PGSC0003DMG402027165 Solanum tuberosum HOM05D006670 ORTHO05D008715 2.1e-22 110.5 80 68.8
FAN17G2931 Fragaria x ananassa HOM05D006670 ORTHO05D008715 4.6e-22 109.4 81 69.1
Cpa.g.sc59.70 Carica papaya HOM05D006670 ORTHO05D119377 1.3e-11 74.7 108 44.4
Psat5g196680 Pisum sativum HOM05D006670 ORTHO05D008715 4.2e-07 59.7 48 58.3


User provided reference genes

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