Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib211G0675 Durio zibethinus HOM05D006548 ORTHO05D008064 1.7e-82 309.3 156 100.0
Gohir.D07G202600 Gossypium hirsutum HOM05D006548 ORTHO05D008064 8.7e-71 270.4 156 86.5
Gorai.001G228000 Gossypium raimondii HOM05D006548 ORTHO05D008064 2.5e-70 268.9 156 85.9
Duzib138G0849 Durio zibethinus HOM05D006548 ORTHO05D008064 3.3e-70 268.5 156 85.3
COL.COLO4_06931 Corchorus olitorius HOM05D006548 ORTHO05D008064 1.2e-69 266.5 162 84.0
Gorai.007G160300 Gossypium raimondii HOM05D006548 ORTHO05D008064 1.2e-69 266.5 160 86.9
Gohir.A11G143200 Gossypium hirsutum HOM05D006548 ORTHO05D008064 4.7e-69 264.6 160 86.2
Gohir.D11G149500 Gossypium hirsutum HOM05D006548 ORTHO05D008064 2.4e-68 262.3 160 85.6
Thecc.01G209700 Theobroma cacao HOM05D006548 ORTHO05D008064 4.2e-65 251.5 140 91.4
Potri.002G239000 Populus trichocarpa HOM05D006548 ORTHO05D008064 3.6e-61 238.4 159 75.5
Ciclev10017030m.g Citrus clementina HOM05D006548 ORTHO05D008064 6.2e-61 237.7 159 76.1
Sabra02G0182000 Salix brachista HOM05D006548 ORTHO05D008064 5.8e-59 231.1 159 74.2
MBI08_g14954_MAGBIO Magnolia biondii HOM05D006659 ORTHO05D008064 1.7e-58 229.6 157 72.6
Manes.13G055300 Manihot esculenta HOM05D006548 ORTHO05D008064 1.7e-58 229.6 163 71.8
Manes.12G059600 Manihot esculenta HOM05D006548 ORTHO05D008064 2.2e-58 229.2 160 71.9
Migut.N00670 Erythranthe guttata HOM05D006548 ORTHO05D008064 2.9e-58 228.8 164 70.7
Potri.014G177100 Populus trichocarpa HOM05D006548 ORTHO05D008064 2.9e-58 228.8 159 73.6
Sabra14G0135300 Salix brachista HOM05D006548 ORTHO05D008064 4.9e-58 228.0 158 73.4
PGR083G0463 Punica granatum HOM05D006548 ORTHO05D008064 1.1e-57 226.9 162 72.2
Nn3g18599 Nelumbo nucifera HOM05D006548 ORTHO05D008064 1.4e-57 226.5 159 71.7
Oeu051515.1 Olea europaea HOM05D006548 ORTHO05D008064 1.9e-57 226.1 159 73.6
Hma1.2p1_0161F.1_g071510 Hydrangea macrophylla HOM05D006548 ORTHO05D008064 2.4e-57 225.7 164 72.0
Nitab4.5_0011925g0010 Nicotiana tabacum HOM05D006548 ORTHO05D008064 3.2e-57 225.3 164 70.7
Cpa.g.sc8.57 Carica papaya HOM05D004405 ORTHO05D005613 4.2e-57 224.9 161 72.0
PSO017G5831 Papaver somniferum HOM05D006548 ORTHO05D008064 5.4e-57 224.6 158 71.5
Rhsim13G0053600 Rhododendron simsii HOM05D006548 ORTHO05D008064 5.4e-57 224.6 163 69.3
PSO675G8742 Papaver somniferum HOM05D006548 ORTHO05D008064 7.1e-57 224.2 156 70.5
Atru.chr6.3534 Acer truncatum HOM05D006548 ORTHO05D008064 2.7e-56 222.2 163 68.7
Lj2P1115T39 Lonicera japonica HOM05D006548 ORTHO05D008064 3.5e-56 221.9 164 70.7
Nitab4.5_0002311g0090 Nicotiana tabacum HOM05D006548 ORTHO05D008064 3.5e-56 221.9 161 70.2
Sed0004612 Sechium edule HOM05D006548 ORTHO05D008064 3.5e-56 221.9 161 70.2
Cc01_g16030 Coffea canephora HOM05D006548 ORTHO05D008064 6.0e-56 221.1 161 71.4
Peaxi162Scf00372g00041 Petunia axillaris HOM05D006548 ORTHO05D008064 7.9e-56 220.7 160 70.6
TAR362G1118 Trochodendron aralioides HOM05D006548 ORTHO05D008064 1.0e-55 220.3 165 67.9
CSS0021481 Camellia sinensis var. sinensis HOM05D006548 ORTHO05D008064 1.3e-55 219.9 164 68.9
Prupe.8G188900 Prunus persica HOM05D006548 ORTHO05D008064 1.8e-55 219.5 166 69.9
THA.LOC104819003 Tarenaya hassleriana HOM05D006548 ORTHO05D008064 1.8e-55 219.5 163 65.6
CiPaw.13G058400 Carya illinoinensis HOM05D006548 ORTHO05D008064 2.3e-55 219.2 156 70.5
MSTRG.17967 Avicennia marina HOM05D006548 ORTHO05D008064 3.0e-55 218.8 157 70.7
Phvul.008G137800 Phaseolus vulgaris HOM05D006548 ORTHO05D008064 3.0e-55 218.8 163 69.3
Glyma.08G343100 Glycine max HOM05D006548 ORTHO05D008064 3.9e-55 218.4 157 67.5
MD10G1150500 Malus domestica HOM05D006548 ORTHO05D008064 3.9e-55 218.4 158 69.0
Nn4g25121 Nelumbo nucifera HOM05D006548 ORTHO05D008064 5.1e-55 218.0 159 70.4
VMungo1383G2587 Vigna mungo HOM05D006548 ORTHO05D008064 1.1e-54 216.9 158 69.6
RcHm_v2.0_Chr6g0282621 Rosa chinensis HOM05D006548 ORTHO05D008064 1.5e-54 216.5 157 66.2
Sopen06g034400 Solanum pennellii HOM05D006548 ORTHO05D008064 1.5e-54 216.5 160 68.1
FAN24G3284 Fragaria x ananassa HOM05D006548 ORTHO05D008064 1.9e-54 216.1 155 67.1
vmacro02826 Vaccinium macrocarpon HOM05D006548 ORTHO05D008064 1.9e-54 216.1 166 68.1
PGSC0003DMG400027686 Solanum tuberosum HOM05D006548 ORTHO05D008064 3.3e-54 215.3 160 67.5
CAN.G874.34 Capsicum annuum HOM05D006548 ORTHO05D008064 2.1e-53 212.6 164 65.2
ClCG09G007890 Citrullus lanatus HOM05D006548 ORTHO05D008064 2.1e-53 212.6 166 66.3
FvH4_2g17650 Fragaria vesca HOM05D006548 ORTHO05D008064 2.1e-53 212.6 157 65.0
HanXRQChr08g0231851 Helianthus annuus HOM05D006548 ORTHO05D008064 2.8e-53 212.2 157 68.8
AL3G18800 Arabidopsis lyrata HOM05D006548 ORTHO05D008064 3.7e-53 211.8 158 65.8
AT3G07480 Arabidopsis thaliana HOM05D006548 ORTHO05D008064 3.7e-53 211.8 158 65.8
CSS0032607 Camellia sinensis var. sinensis HOM05D006548 ORTHO05D008064 3.7e-53 211.8 166 66.3
FAN27G0042 Fragaria x ananassa HOM05D006548 ORTHO05D008064 3.7e-53 211.8 157 65.0
FAN27G0390 Fragaria x ananassa HOM05D006548 ORTHO05D008064 3.7e-53 211.8 157 65.0
CARHR082130 Cardamine hirsuta HOM05D006548 ORTHO05D008064 4.8e-53 211.5 162 65.4
SGA_v2.0_scaffold95G28706 Striga asiatica HOM05D006548 ORTHO05D008064 6.2e-53 211.1 162 67.3
A05p40730 Brassica napus HOM05D006548 ORTHO05D008064 8.1e-53 210.7 153 66.7
BraA05t22804Z Brassica rapa HOM05D006548 ORTHO05D008064 8.1e-53 210.7 153 66.7
Aa31LG5G18040 Aethionema arabicum HOM05D006548 ORTHO05D008064 1.1e-52 210.3 161 64.0
Cfa010631 Carpinus fangiana HOM05D006548 ORTHO05D008064 1.1e-52 210.3 161 68.3
Nitab4.5_0001348g0010 Nicotiana tabacum HOM05D006548 ORTHO05D008064 1.1e-52 210.3 165 64.8
Nitab4.5_0007144g0040 Nicotiana tabacum HOM05D006548 ORTHO05D008064 1.1e-52 210.3 165 64.8
arahy.Tifrunner.gnm1.ann1.C7NXRU Arachis hypogaea HOM05D006548 ORTHO05D008064 1.8e-52 209.5 164 65.2
Glyma.18G153900 Glycine max HOM05D006548 ORTHO05D008064 1.8e-52 209.5 158 69.0
Sp3g06390 Schrenkiella parvula HOM05D006548 ORTHO05D008064 2.4e-52 209.1 163 63.8
Aqoxy2G04054 Aquilegia oxysepala HOM05D006548 ORTHO05D008064 3.1e-52 208.8 160 65.0
Haze_03573 Corylus avellana HOM05D006548 ORTHO05D008064 3.1e-52 208.8 163 66.9
arahy.Tifrunner.gnm1.ann1.I0E60T Arachis hypogaea HOM05D006548 ORTHO05D008064 6.9e-52 207.6 164 64.6
Carub.0003s0703 Capsella rubella HOM05D006548 ORTHO05D008064 6.9e-52 207.6 158 64.6
BcaB03g14699 Brassica carinata HOM05D006548 ORTHO05D008064 1.5e-51 206.5 153 65.4
BolC5t34638H Brassica oleracea HOM05D006548 ORTHO05D008064 2.0e-51 206.1 156 66.0
QL09p047049 Quercus lobata HOM05D006548 ORTHO05D008064 2.0e-51 206.1 155 67.1
HPP92_002744 Vanilla planifolia HOM05D006548 ORTHO05D008064 2.0e-51 206.1 160 65.0
C05p59840 Brassica napus HOM05D006548 ORTHO05D008064 2.6e-51 205.7 156 65.4
Thhalv10021677m.g Eutrema salsugineum HOM05D006548 ORTHO05D008064 2.6e-51 205.7 159 65.4
Ah.11g050830 Amaranthus hybridus HOM05D006548 ORTHO05D008064 1.3e-50 203.4 164 65.2
BcaC05g29539 Brassica carinata HOM05D006548 ORTHO05D008064 1.3e-50 203.4 160 63.8
DCAR_030798 Daucus carota HOM05D006548 ORTHO05D008064 4.9e-50 201.4 159 63.5
unitig_61.g26345 Utricularia gibba HOM05D006548 ORTHO05D008064 6.4e-50 201.1 159 63.5
CANSAT01G2941 Cannabis sativa HOM05D006548 ORTHO05D008064 8.4e-50 200.7 167 59.9
AUR62028648 Chenopodium quinoa HOM05D006548 ORTHO05D008064 1.4e-49 199.9 167 59.3
TWI18G0731 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 1.9e-49 199.5 154 66.9
MELO3C015717.2 Cucumis melo HOM05D006548 ORTHO05D008064 2.4e-49 199.1 166 62.0
Psat3g151760 Pisum sativum HOM05D006548 ORTHO05D008064 2.4e-49 199.1 155 65.8
Lj1g0008534 Lotus japonicus HOM05D006548 ORTHO05D008064 4.2e-49 198.4 161 60.9
TWI75G1339 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 5.5e-49 198.0 155 63.9
Ca_07442_v3 Cicer arietinum L. HOM05D006548 ORTHO05D008064 1.6e-48 196.4 154 63.6
PGSC0003DMG400020639 Solanum tuberosum HOM05D006548 ORTHO05D008064 2.1e-48 196.1 162 63.0
Os09g0514600 Oryza sativa ssp. japonica HOM05D006548 ORTHO05D008064 3.5e-48 195.3 159 62.3
Solyc06g007630.1 Solanum lycopersicum HOM05D006548 ORTHO05D008064 3.5e-48 195.3 162 63.0
Sopen06g002520 Solanum pennellii HOM05D006548 ORTHO05D008064 3.5e-48 195.3 162 63.0
ECA247G0922 Erigeron canadensis HOM05D006548 ORTHO05D008064 4.6e-48 194.9 160 63.1
TPR.G26806 Trifolium pratense HOM05D006548 ORTHO05D008064 4.6e-48 194.9 156 65.4
TWI36G0698 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 4.6e-48 194.9 153 64.7
Lsat_1_v5_gn_9_16480 Lactuca sativa HOM05D006548 ORTHO05D008064 6.0e-48 194.5 161 63.4
Lalb_Chr01g0021941 Lupinus albus HOM05D006548 ORTHO05D008064 1.0e-47 193.7 161 59.0
Zm00001eb102720 Zea mays HOM05D006548 ORTHO05D008064 1.0e-47 193.7 160 60.6
GSVIVG01003797001 Vitis vinifera HOM05D006548 ORTHO05D008064 3.9e-47 191.8 119 72.3
Lalb_Chr03g0040981 Lupinus albus HOM05D006548 ORTHO05D008064 6.7e-47 191.0 158 59.5
ATR0824G029 Amborella trichopoda HOM05D006548 ORTHO05D008064 1.6e-45 186.4 140 62.9
Medtr7g051230 Medicago truncatula HOM05D006548 ORTHO05D008064 2.1e-45 186.0 154 60.4
Zm00001eb318350 Zea mays HOM05D006548 ORTHO05D008064 1.8e-44 183.0 166 57.8
Gohir.A07G196200 Gossypium hirsutum HOM05D006548 ORTHO05D008064 5.8e-43 177.9 148 66.2
Sc05g0001680 Simmondsia chinensis HOM05D006548 ORTHO05D008064 8.4e-42 174.1 125 70.4
CsaV3_7G027180 Cucumis sativus L. HOM05D006548 ORTHO05D008064 2.1e-40 169.5 150 60.7
EL10Ac5g10597 Beta vulgaris HOM05D006548 ORTHO05D008064 4.8e-37 158.3 107 70.1
Pp3c2_31000 Physcomitrium patens HOM05D006548 ORTHO05D008064 1.1e-30 137.1 130 47.7
AagrBONN_evm.TU.Sc2ySwM_362.984 Anthoceros agrestis HOM05D006548 ORTHO05D008064 4.3e-30 135.2 135 46.7
Ciclev10013747m.g Citrus clementina HOM05D006548 ORTHO05D008064 1.8e-28 129.8 84 72.6
BcaC05g29538 Brassica carinata HOM05D006548 ORTHO05D008064 3.8e-26 122.1 109 56.9
Mapoly0085s0036 Marchantia polymorpha HOM05D006548 ORTHO05D008064 5.0e-26 121.7 128 46.9
CDE12G0850 Ceratophyllum demersum HOM05D006548 ORTHO05D008064 3.6e-24 115.5 77 66.2
C03p67920 Brassica napus HOM05D006548 ORTHO05D008064 2.0e-22 109.8 89 62.9
BcaC01g02172 Brassica carinata HOM05D006548 ORTHO05D008064 9.7e-22 107.5 89 62.9
Actinidia30005 Actinidia chinensis HOM05D006548 ORTHO05D008064 5.5e-17 91.7 169 40.8
SEGI_16405 Sequoiadendron giganteum HOM05D002489 ORTHO05D002653 2.3e-15 86.3 71 56.3
CBR_g34314 Chara braunii HOM05D006548 ORTHO05D008064 1.1e-14 84.0 160 37.5
SMO119G0279 Selaginella moellendorffii HOM05D006548 ORTHO05D008064 1.6e-11 73.6 118 34.7
Mapoly0113s0043 Marchantia polymorpha HOM05D006548 ORTHO05D008064 2.0e-11 73.2 149 34.9
BolC3t19017H Brassica oleracea HOM05D006548 ORTHO05D008064 7.7e-11 71.2 48 66.7
BraA03t13759Z Brassica rapa HOM05D006548 ORTHO05D008064 1.7e-10 70.1 48 68.8


User provided reference genes

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