Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib211G0419 Durio zibethinus HOM05D000054 ORTHO05D000171 1.6e-54 215.7 98 100.0
Gorai.010G162800 Gossypium raimondii HOM05D000054 ORTHO05D000171 8.5e-24 113.6 91 61.5
Lj1C1177G18 Lonicera japonica HOM05D000054 ORTHO05D000171 7.2e-23 110.5 97 54.6
Duzib235G0508 Durio zibethinus HOM05D000054 ORTHO05D000171 1.2e-22 109.8 91 59.3
Gohir.A06G127800 Gossypium hirsutum HOM05D000054 ORTHO05D000171 6.1e-22 107.5 91 59.3
Thecc.06G162700 Theobroma cacao HOM05D000054 ORTHO05D000171 8.0e-22 107.1 91 58.2
FAN21G4054 Fragaria x ananassa HOM05D000054 ORTHO05D000171 2.3e-21 105.5 98 53.1
CSS0022270 Camellia sinensis var. sinensis HOM05D000054 ORTHO05D000171 4.8e-19 97.8 120 43.3
CSS0048529 Camellia sinensis var. sinensis HOM05D000054 ORTHO05D000171 8.2e-19 97.1 101 46.5
Dinv12728 Davidia involucrata HOM05D000054 ORTHO05D000171 1.1e-18 96.7 119 42.9
Dinv32322 Davidia involucrata HOM05D000054 ORTHO05D000171 2.4e-18 95.5 120 42.5
MD10G1273600 Malus domestica HOM05D000054 ORTHO05D000171 7.0e-18 94.0 123 41.5
COL.COLO4_22843 Corchorus olitorius HOM05D000054 ORTHO05D000171 1.2e-17 93.2 51 86.3
CSS0014394 Camellia sinensis var. sinensis HOM05D000054 ORTHO05D000171 2.0e-17 92.4 120 40.8
CSS0034854 Camellia sinensis var. sinensis HOM05D000054 ORTHO05D000171 2.0e-17 92.4 124 39.5
MD10G1273400 Malus domestica HOM05D000054 ORTHO05D000171 2.6e-17 92.0 90 51.1
CSS0022769 Camellia sinensis var. sinensis HOM05D000054 ORTHO05D000171 3.5e-17 91.7 120 40.8
FAN21G0760 Fragaria x ananassa HOM05D000054 ORTHO05D000171 5.9e-17 90.9 91 51.6
MD00G1006900 Malus domestica HOM05D000054 ORTHO05D000171 5.9e-17 90.9 90 48.9
Actinidia16764 Actinidia chinensis HOM05D000054 ORTHO05D000171 7.7e-17 90.5 120 40.8
GSVIVG01021280001 Vitis vinifera HOM05D000054 ORTHO05D000171 7.7e-17 90.5 121 40.5
FvH4_3g07044 Fragaria vesca HOM05D000054 ORTHO05D000171 1.0e-16 90.1 91 51.6
Prupe.4G069200 Prunus persica HOM05D000054 ORTHO05D000171 1.7e-16 89.4 97 46.4
vmacro10939 Vaccinium macrocarpon HOM05D000054 ORTHO05D000171 1.7e-16 89.4 120 39.2
arahy.Tifrunner.gnm1.ann1.LTRJ1V Arachis hypogaea HOM05D000054 ORTHO05D000171 2.2e-16 89.0 124 37.9
CAN.G411.26 Capsicum annuum HOM05D000054 ORTHO05D000171 3.8e-16 88.2 121 39.7
arahy.Tifrunner.gnm1.ann1.FI1HV3 Arachis hypogaea HOM05D000054 ORTHO05D000171 5.0e-16 87.8 124 37.9
FAN21G0360 Fragaria x ananassa HOM05D000054 ORTHO05D000171 6.5e-16 87.4 89 51.7
MD00G1006700 Malus domestica HOM05D000054 ORTHO05D000171 6.5e-16 87.4 91 48.4
TPR.G6785 Trifolium pratense HOM05D000054 ORTHO05D000171 6.5e-16 87.4 120 40.0
Ciclev10014125m.g Citrus clementina HOM05D000054 ORTHO05D000171 8.5e-16 87.0 111 41.4
RcHm_v2.0_Chr5g0012081 Rosa chinensis HOM05D000054 ORTHO05D000171 8.5e-16 87.0 51 74.5
TWI09G1120 Tripterygium wilfordii HOM05D000054 ORTHO05D000171 1.1e-15 86.7 138 38.4
GSVIVG01021282001 Vitis vinifera HOM05D000054 ORTHO05D000171 1.1e-15 86.7 58 63.8
Potri.004G063500 Populus trichocarpa HOM05D000054 ORTHO05D000171 2.5e-15 85.5 119 40.3
Eucgr.E02840 Eucalyptus grandis HOM05D000054 ORTHO05D000171 3.2e-15 85.1 120 35.8
FvH4_3g07010 Fragaria vesca HOM05D000054 ORTHO05D000171 9.4e-15 83.6 91 47.3
Prupe.4G069100 Prunus persica HOM05D000054 ORTHO05D000171 9.4e-15 83.6 123 40.7
Eucgr.E02839 Eucalyptus grandis HOM05D000054 ORTHO05D000171 1.2e-14 83.2 119 36.1
MSTRG.7442 Avicennia marina HOM05D000054 ORTHO05D000171 1.6e-14 82.8 125 36.0
FAN21G2359 Fragaria x ananassa HOM05D000054 ORTHO05D000171 1.6e-14 82.8 91 47.3
RcHm_v2.0_Chr5g0012091 Rosa chinensis HOM05D000054 ORTHO05D000171 2.1e-14 82.4 51 70.6
MD00G1006800 Malus domestica HOM05D000054 ORTHO05D000171 3.6e-14 81.6 90 44.4
RcHm_v2.0_Chr5g0012101 Rosa chinensis HOM05D000054 ORTHO05D000171 3.6e-14 81.6 51 70.6
CSS0048398 Camellia sinensis var. sinensis HOM05D000054 ORTHO05D000171 4.7e-14 81.3 51 66.7
Ca_17882_v3 Cicer arietinum L. HOM05D000054 ORTHO05D000171 4.7e-14 81.3 119 37.8
Manes.16G044300 Manihot esculenta HOM05D000054 ORTHO05D000171 4.7e-14 81.3 120 40.0
TWI73G0799 Tripterygium wilfordii HOM05D000054 ORTHO05D000171 4.7e-14 81.3 124 38.7
ECA248G2116 Erigeron canadensis HOM05D000054 ORTHO05D000171 8.0e-14 80.5 120 35.8
Migut.M00993 Erythranthe guttata HOM05D000054 ORTHO05D000171 8.0e-14 80.5 123 36.6
Eucgr.E02844 Eucalyptus grandis HOM05D000054 ORTHO05D000171 8.0e-14 80.5 58 58.6
FAN11G3923 Fragaria x ananassa HOM05D000054 ORTHO05D000171 8.0e-14 80.5 121 37.2
Gohir.D06G139600 Gossypium hirsutum HOM05D000054 ORTHO05D000171 8.0e-14 80.5 91 48.4
PGSC0003DMG401028453 Solanum tuberosum HOM05D000054 ORTHO05D000171 8.0e-14 80.5 125 33.6
HanXRQChr01g0006411 Helianthus annuus HOM05D000054 ORTHO05D000171 1.0e-13 80.1 120 38.3
ECA236G2881 Erigeron canadensis HOM05D000054 ORTHO05D000171 2.3e-13 79.0 120 35.0
ECA248G0995 Erigeron canadensis HOM05D000054 ORTHO05D000171 2.3e-13 79.0 120 34.2
PGSC0003DMG400028454 Solanum tuberosum HOM05D000054 ORTHO05D000171 2.3e-13 79.0 119 37.0
MSTRG.7441 Avicennia marina HOM05D000054 ORTHO05D000171 4.0e-13 78.2 123 34.1
CSS0015393 Camellia sinensis var. sinensis HOM05D000054 ORTHO05D000171 4.0e-13 78.2 58 56.9
CiPaw.09G135600 Carya illinoinensis HOM05D000054 ORTHO05D000171 4.0e-13 78.2 91 44.0
CAN.G411.25 Capsicum annuum HOM05D000054 ORTHO05D000171 5.2e-13 77.8 125 32.0
Solyc02g071880.3 Solanum lycopersicum HOM05D000054 ORTHO05D000171 5.2e-13 77.8 119 37.0
Sopen02g020870 Solanum pennellii HOM05D000054 ORTHO05D000171 5.2e-13 77.8 119 37.0
Eucgr.E02843 Eucalyptus grandis HOM05D000054 ORTHO05D000171 6.8e-13 77.4 58 55.2
FAN25G2900 Fragaria x ananassa HOM05D000054 ORTHO05D000171 6.8e-13 77.4 89 49.4
Lsat_1_v5_gn_7_26820 Lactuca sativa HOM05D000054 ORTHO05D000171 6.8e-13 77.4 118 33.9
Hund21457 Selenicereus undatus HOM05D000054 ORTHO05D000171 6.8e-13 77.4 103 40.8
Solyc02g071870.4 Solanum lycopersicum HOM05D000054 ORTHO05D000171 8.8e-13 77.0 125 32.0
Migut.H01401 Erythranthe guttata HOM05D000054 ORTHO05D000171 1.2e-12 76.6 123 34.1
Eucgr.D00415 Eucalyptus grandis HOM05D000054 ORTHO05D000171 1.2e-12 76.6 118 35.6
AUR62039501 Chenopodium quinoa HOM05D000054 ORTHO05D000171 1.5e-12 76.3 51 62.7
SalBow7G1080 Salvia bowleyana HOM05D000054 ORTHO05D000171 1.5e-12 76.3 124 34.7
SalBow7G1540 Salvia bowleyana HOM05D000054 ORTHO05D000171 1.5e-12 76.3 124 34.7
Eucgr.E02842 Eucalyptus grandis HOM05D000054 ORTHO05D000171 2.0e-12 75.9 50 62.0
Sed0008044 Sechium edule HOM05D000054 ORTHO05D000171 2.0e-12 75.9 123 33.3
Sopen02g020860 Solanum pennellii HOM05D000054 ORTHO05D000171 2.0e-12 75.9 125 32.0
Cc02_g15910 Coffea canephora HOM05D000054 ORTHO05D000171 2.6e-12 75.5 57 57.9
RcHm_v2.0_Chr5g0012071 Rosa chinensis HOM05D000054 ORTHO05D000171 2.6e-12 75.5 51 64.7
SalBow8G0050 Salvia bowleyana HOM05D000054 ORTHO05D000171 3.4e-12 75.1 123 35.0
ECA248G3187 Erigeron canadensis HOM05D000054 ORTHO05D000171 4.4e-12 74.7 118 36.4
arahy.Tifrunner.gnm1.ann1.G6JZIF Arachis hypogaea HOM05D000054 ORTHO05D000171 5.7e-12 74.3 51 60.8
CiPaw.09G135900 Carya illinoinensis HOM05D000054 ORTHO05D000171 5.7e-12 74.3 120 37.5
ClCG03G007350 Citrullus lanatus HOM05D000054 ORTHO05D000171 5.7e-12 74.3 93 40.9
FAN21G1730 Fragaria x ananassa HOM05D000054 ORTHO05D000171 5.7e-12 74.3 118 37.3
HanXRQChr09g0258651 Helianthus annuus HOM05D000054 ORTHO05D000171 5.7e-12 74.3 120 33.3
THA.LOC104814277 Tarenaya hassleriana HOM05D000054 ORTHO05D000171 5.7e-12 74.3 90 44.4
MELO3C002686.2 Cucumis melo HOM05D000054 ORTHO05D000171 9.8e-12 73.6 93 40.9
HanXRQChr04g0116211 Helianthus annuus HOM05D000054 ORTHO05D000171 9.8e-12 73.6 120 32.5
FAN21G2154 Fragaria x ananassa HOM05D000054 ORTHO05D000171 1.3e-11 73.2 89 47.2
Lalb_Chr13g0295381 Lupinus albus HOM05D000054 ORTHO05D000171 1.3e-11 73.2 51 60.8
Sed0002767 Sechium edule HOM05D000054 ORTHO05D000171 1.3e-11 73.2 123 33.3
MSTRG.14746 Avicennia marina HOM05D000054 ORTHO05D000171 1.7e-11 72.8 117 34.2
Glyma.08G120302 Glycine max HOM05D000054 ORTHO05D000171 1.7e-11 72.8 119 35.3
Ah.14g086900 Amaranthus hybridus HOM05D000054 ORTHO05D000171 2.2e-11 72.4 51 58.8
Lj4g0008664 Lotus japonicus HOM05D000054 ORTHO05D000171 2.2e-11 72.4 51 60.8
PGR042G3709 Punica granatum HOM05D000054 ORTHO05D000171 2.2e-11 72.4 90 45.6
Ciclev10014126m.g Citrus clementina HOM05D000054 ORTHO05D000171 2.8e-11 72.0 49 65.3
Aa31LG6G5890 Aethionema arabicum HOM05D000054 ORTHO05D000171 4.8e-11 71.2 89 42.7
arahy.Tifrunner.gnm1.ann1.1DL5MS Arachis hypogaea HOM05D000054 ORTHO05D000171 6.3e-11 70.9 51 58.8
PGR042G1935 Punica granatum HOM05D000054 ORTHO05D000171 6.3e-11 70.9 50 64.0
Atru.chr9.1615 Acer truncatum HOM05D000054 ORTHO05D000171 8.3e-11 70.5 122 33.6
MSTRG.16180 Avicennia marina HOM05D000054 ORTHO05D000171 8.3e-11 70.5 123 32.5
Glyma.05G162800 Glycine max HOM05D000054 ORTHO05D000171 8.3e-11 70.5 57 56.1
Glyma.13G224500 Glycine max HOM05D000054 ORTHO05D000171 8.3e-11 70.5 92 40.2
QL05p051255 Quercus lobata HOM05D000054 ORTHO05D000171 8.3e-11 70.5 60 56.7
Psat7g067280 Pisum sativum HOM05D000054 ORTHO05D000171 1.1e-10 70.1 51 58.8
Potri.011G072566 Populus trichocarpa HOM05D000054 ORTHO05D000171 1.1e-10 70.1 58 56.9
VMungo0540G2231 Vigna mungo HOM05D000054 ORTHO05D000171 1.4e-10 69.7 56 53.6
A09p36700 Brassica napus HOM05D000054 ORTHO05D000171 1.8e-10 69.3 120 33.3
BraA09t39189Z Brassica rapa HOM05D000054 ORTHO05D000171 1.8e-10 69.3 120 33.3
CANSAT35G1492 Cannabis sativa HOM05D000054 ORTHO05D000171 1.8e-10 69.3 118 34.7
Lj2C315T5 Lonicera japonica HOM05D000054 ORTHO05D000171 1.8e-10 69.3 120 33.3
Oeu039866.1 Olea europaea HOM05D000054 ORTHO05D000171 2.4e-10 68.9 158 31.6
QL05p050823 Quercus lobata HOM05D000054 ORTHO05D000171 2.4e-10 68.9 60 55.0
VMungo0251G2422 Vigna mungo HOM05D000054 ORTHO05D000171 2.4e-10 68.9 119 32.8
DCAR_005176 Daucus carota HOM05D000054 ORTHO05D000171 3.1e-10 68.6 114 36.0
MD00G1007000 Malus domestica HOM05D000054 ORTHO05D000171 3.1e-10 68.6 91 41.8
Sabra11G0056800 Salix brachista HOM05D000054 ORTHO05D005077 3.1e-10 68.6 105 37.1
Sp1g25640 Schrenkiella parvula HOM05D000054 ORTHO05D000171 3.1e-10 68.6 91 38.5
Carub.0001s2799 Capsella rubella HOM05D000054 ORTHO05D000171 4.1e-10 68.2 91 39.6
Eucgr.D00418 Eucalyptus grandis HOM05D000054 ORTHO05D002584 4.1e-10 68.2 59 47.5
Medtr8g087740 Medicago truncatula HOM05D000054 ORTHO05D000171 4.1e-10 68.2 51 58.8
BcaC05g26990 Brassica carinata HOM05D000054 ORTHO05D002584 5.4e-10 67.8 119 33.6
C05p28500 Brassica napus HOM05D000054 ORTHO05D000171 5.4e-10 67.8 119 33.6
BolC5t31574H Brassica oleracea HOM05D000054 ORTHO05D000171 5.4e-10 67.8 119 33.6
Eucgr.D00419 Eucalyptus grandis HOM05D000054 ORTHO05D000171 5.4e-10 67.8 118 33.1
Sabra11G0060200 Salix brachista HOM05D000054 ORTHO05D000171 5.4e-10 67.8 105 37.1
Atru.chr10.1517 Acer truncatum HOM05D000054 ORTHO05D000171 7.0e-10 67.4 49 59.2
AL1G43580 Arabidopsis lyrata HOM05D000054 ORTHO05D000171 9.1e-10 67.0 91 39.6
Lsat_1_v5_gn_7_26661 Lactuca sativa HOM05D000054 ORTHO05D000171 9.1e-10 67.0 98 35.7
AT1G29750 Arabidopsis thaliana HOM05D000054 ORTHO05D000171 1.2e-09 66.6 91 39.6
Thhalv10006670m.g Eutrema salsugineum HOM05D000054 ORTHO05D000171 1.2e-09 66.6 91 39.6
BcaB03g12175 Brassica carinata HOM05D000054 ORTHO05D000171 1.6e-09 66.2 90 40.0
COL.COLO4_22844 Corchorus olitorius HOM05D000054 ORTHO05D000171 2.0e-09 65.9 128 31.2
CsaV3_1G032970 Cucumis sativus L. HOM05D000054 ORTHO05D000171 2.0e-09 65.9 54 53.7
Thecc.06G162800 Theobroma cacao HOM05D000054 ORTHO05D000171 2.7e-09 65.5 51 56.9
FvH4_3g07045 Fragaria vesca HOM05D000054 ORTHO05D000171 3.5e-09 65.1 51 56.9
CARHR029120 Cardamine hirsuta HOM05D000054 ORTHO05D000171 4.5e-09 64.7 91 38.5
BcaC01g00133 Brassica carinata HOM05D000054 ORTHO05D000171 5.9e-09 64.3 90 37.8
C03p76150 Brassica napus HOM05D000054 ORTHO05D000171 5.9e-09 64.3 90 37.8
BolC3t19871H Brassica oleracea HOM05D000054 ORTHO05D000171 5.9e-09 64.3 90 37.8
Manes.17G061200 Manihot esculenta HOM05D000054 ORTHO05D000171 5.9e-09 64.3 90 40.0
Phvul.006G170500 Phaseolus vulgaris HOM05D000054 ORTHO05D000171 5.9e-09 64.3 131 32.1
QL05p051288 Quercus lobata HOM05D000054 ORTHO05D000171 1.3e-08 63.2 64 51.6
A08p24880 Brassica napus HOM05D000054 ORTHO05D000171 1.7e-08 62.8 90 36.7
BraA08t34444Z Brassica rapa HOM05D000054 ORTHO05D000171 1.7e-08 62.8 90 36.7
GSVIVG01021278001 Vitis vinifera HOM05D000054 ORTHO05D000171 1.7e-08 62.8 49 53.1
HanXRQChr16g0498651 Helianthus annuus HOM05D000054 ORTHO05D000171 2.9e-08 62.0 91 35.2
Gohir.D05G155500 Gossypium hirsutum HOM05D000054 ORTHO05D000171 3.8e-08 61.6 49 53.1
Oeu040935.1 Olea europaea HOM05D000054 ORTHO05D000171 3.8e-08 61.6 144 27.8
DCAR_005178 Daucus carota HOM05D000054 ORTHO05D002584 6.5e-08 60.8 125 32.0
Gohir.A05G152800 Gossypium hirsutum HOM05D000054 ORTHO05D000171 8.5e-08 60.5 49 53.1
HanXRQChr10g0279211 Helianthus annuus HOM05D000054 ORTHO05D000171 8.5e-08 60.5 51 47.1
Nitab4.5_0008572g0050 Nicotiana tabacum HOM05D000054 ORTHO05D000171 1.1e-07 60.1 98 34.7
DCAR_007925 Daucus carota HOM05D000054 ORTHO05D002584 1.9e-07 59.3 104 33.7
Duzib235G0553 Durio zibethinus HOM05D000054 ORTHO05D000171 2.5e-07 58.9 49 53.1
Gohir.A06G127900 Gossypium hirsutum HOM05D000054 ORTHO05D000171 3.2e-07 58.5 97 34.0
Thecc.06G162900 Theobroma cacao HOM05D000054 ORTHO05D000171 4.2e-07 58.2 120 28.3
Haze_05431 Corylus avellana HOM05D000054 ORTHO05D000171 5.5e-07 57.8 51 54.9
MBI06_g10744_MAGBIO Magnolia biondii HOM05D000054 ORTHO05D000171 5.5e-07 57.8 103 35.0
Phvul.002G242600 Phaseolus vulgaris HOM05D000054 ORTHO05D000171 5.5e-07 57.8 50 52.0
HanXRQChr16g0498661 Helianthus annuus HOM05D000054 ORTHO05D000171 7.2e-07 57.4 87 34.5
Gohir.D06G139500 Gossypium hirsutum HOM05D000054 ORTHO05D000171 1.2e-06 56.6 90 35.6
Gorai.010G162700 Gossypium raimondii HOM05D000054 ORTHO05D000171 1.2e-06 56.6 90 35.6
FAN21G3268 Fragaria x ananassa HOM05D000054 ORTHO05D000171 2.7e-06 55.5 64 43.8
ClCG11G017250 Citrullus lanatus HOM05D000054 ORTHO05D000171 3.6e-06 55.1 83 39.8
Potri.011G073091 Populus trichocarpa HOM05D000054 ORTHO05D000171 3.6e-06 55.1 89 36.0
Peaxi162Scf00112g01913 Petunia axillaris HOM05D000054 ORTHO05D000171 4.7e-06 54.7 108 29.6
BcaB07g32562 Brassica carinata HOM05D000054 ORTHO05D002584 6.1e-06 54.3 105 30.5
Rhsim02G0110200 Rhododendron simsii HOM05D000054 ORTHO05D000171 8.0e-06 53.9 86 33.7


User provided reference genes

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