Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib211G0174 Durio zibethinus HOM05D005553 ORTHO05D006866 0.0e+00 1169.8 584 100.0
Duzib138G1946 Durio zibethinus HOM05D005553 ORTHO05D006866 3.6e-263 911.4 525 86.3
Gohir.D07G206400 Gossypium hirsutum HOM05D005553 ORTHO05D006866 3.1e-262 908.3 539 84.4
Gohir.A07G200000 Gossypium hirsutum HOM05D005553 ORTHO05D006866 6.8e-262 907.1 539 84.6
Gorai.001G232700 Gossypium raimondii HOM05D005553 ORTHO05D006866 3.4e-261 904.8 540 84.4
Thecc.01G222300 Theobroma cacao HOM05D005553 ORTHO05D006866 9.6e-248 860.1 497 85.3
COL.COLO4_15644 Corchorus olitorius HOM05D005553 ORTHO05D006866 7.1e-243 844.0 530 80.8
Cpa.g.sc8.131 Carica papaya HOM05D005553 ORTHO05D006866 4.4e-200 701.8 547 70.0
Cfa002842 Carpinus fangiana HOM05D005553 ORTHO05D006866 3.7e-199 698.7 538 68.0
Prupe.8G200200 Prunus persica HOM05D005553 ORTHO05D006866 1.4e-193 680.2 529 68.4
CSS0002030 Camellia sinensis var. sinensis HOM05D005553 ORTHO05D006866 6.7e-193 677.9 544 66.4
MD10G1161200 Malus domestica HOM05D005553 ORTHO05D006866 1.1e-190 670.6 542 66.4
Thhalv10020331m.g Eutrema salsugineum HOM05D005553 ORTHO05D006866 4.5e-189 665.2 515 66.8
Dinv12662 Davidia involucrata HOM05D005553 ORTHO05D006866 5.9e-189 664.8 552 65.0
CANSAT01G0440 Cannabis sativa HOM05D005553 ORTHO05D006866 1.1e-187 660.6 542 64.8
Sp3g06120 Schrenkiella parvula HOM05D005553 ORTHO05D006866 1.9e-187 659.8 515 67.0
AL3G18430 Arabidopsis lyrata HOM05D005553 ORTHO05D006866 3.2e-187 659.1 519 66.5
THA.LOC104818968 Tarenaya hassleriana HOM05D005553 ORTHO05D006866 8.0e-186 654.4 525 66.1
TWI36G0825 Tripterygium wilfordii HOM05D005553 ORTHO05D006866 1.4e-185 653.7 542 64.9
RcHm_v2.0_Chr6g0284311 Rosa chinensis HOM05D005553 ORTHO05D006866 1.8e-185 653.3 545 64.4
Carub.0003s0670 Capsella rubella HOM05D005553 ORTHO05D006866 8.8e-185 651.0 515 66.0
Atru.chr6.1417 Acer truncatum HOM05D005553 ORTHO05D006866 1.2e-184 650.6 525 67.4
vmacro14742 Vaccinium macrocarpon HOM05D005553 ORTHO05D006866 1.2e-184 650.6 552 64.3
Manes.13G047900 Manihot esculenta HOM05D005553 ORTHO05D006866 1.5e-184 650.2 552 63.9
Potri.002G245000 Populus trichocarpa HOM05D005553 ORTHO05D006866 7.5e-184 647.9 541 64.0
CARHR081820 Cardamine hirsuta HOM05D005553 ORTHO05D006866 2.8e-183 646.0 515 65.8
AT3G07180 Arabidopsis thaliana HOM05D005553 ORTHO05D006866 6.3e-183 644.8 519 65.3
Ciclev10019403m.g Citrus clementina HOM05D005553 ORTHO05D006866 8.3e-183 644.4 529 64.8
FAN27G0725 Fragaria x ananassa HOM05D005553 ORTHO05D006866 8.3e-183 644.4 523 65.6
A05p41030 Brassica napus HOM05D005553 ORTHO05D006866 1.4e-182 643.7 532 64.7
Sabra02G0186400 Salix brachista HOM05D005553 ORTHO05D006866 1.4e-182 643.7 540 63.7
Hma1.2p1_1018F.1_g248400 Hydrangea macrophylla HOM05D005553 ORTHO05D006866 1.8e-182 643.3 507 67.1
BcaC05g29748 Brassica carinata HOM05D005553 ORTHO05D006866 2.4e-182 642.9 526 64.3
Lj2A1127T50 Lonicera japonica HOM05D005553 ORTHO05D006866 1.6e-181 640.2 553 63.1
BraA05t22829Z Brassica rapa HOM05D005553 ORTHO05D006866 2.0e-181 639.8 532 64.1
FAN24G0205 Fragaria x ananassa HOM05D005553 ORTHO05D006866 7.7e-181 637.9 521 64.7
AL384U10020 Arabidopsis lyrata HOM05D005553 ORTHO05D006866 2.9e-180 636.0 508 65.9
FvH4_2g18680 Fragaria vesca HOM05D005553 ORTHO05D006866 2.9e-180 636.0 521 64.5
QL09p052121 Quercus lobata HOM05D005553 ORTHO05D006866 5.0e-180 635.2 503 68.4
BcaC05g29847 Brassica carinata HOM05D005553 ORTHO05D006866 6.5e-180 634.8 528 64.2
C05p60190 Brassica napus HOM05D005553 ORTHO05D006866 9.4e-179 630.9 528 64.0
BolC5t34669H Brassica oleracea HOM05D005553 ORTHO05D006866 9.4e-179 630.9 528 64.0
GSVIVG01038357001 Vitis vinifera HOM05D005553 ORTHO05D006866 2.1e-178 629.8 496 66.7
CSS0038931 Camellia sinensis var. sinensis HOM05D005553 ORTHO05D006866 6.1e-178 628.2 544 63.6
CsaV3_6G002380 Cucumis sativus L. HOM05D005553 ORTHO05D006866 4.0e-177 625.5 548 60.8
QL09p052989 Quercus lobata HOM05D005553 ORTHO05D006866 8.8e-177 624.4 503 68.0
Oeu023098.1 Olea europaea HOM05D005553 ORTHO05D006866 1.2e-176 624.0 536 60.8
Sed0021986 Sechium edule HOM05D005553 ORTHO05D006866 5.7e-176 621.7 548 61.3
PSO063G5023 Papaver somniferum HOM05D005553 ORTHO05D006866 1.7e-175 620.2 541 60.1
PGR044G2083 Punica granatum HOM05D005553 ORTHO05D006866 2.8e-175 619.4 541 60.3
Nn1g07927 Nelumbo nucifera HOM05D005553 ORTHO05D006866 3.7e-175 619.0 549 61.2
MSTRG.17999 Avicennia marina HOM05D005553 ORTHO05D006866 6.3e-175 618.2 551 60.8
HanXRQChr07g0189551 Helianthus annuus HOM05D005553 ORTHO05D006866 6.3e-175 618.2 542 60.9
MELO3C020015.2 Cucumis melo HOM05D005553 ORTHO05D006866 8.3e-175 617.8 547 60.5
Aa31LG5G17740 Aethionema arabicum HOM05D005553 ORTHO05D006866 1.1e-174 617.5 521 63.5
PSO782G3165 Papaver somniferum HOM05D005553 ORTHO05D006866 1.6e-173 613.6 541 59.3
PGSC0003DMG400017493 Solanum tuberosum HOM05D005553 ORTHO05D006866 2.0e-173 613.2 539 60.1
Eucgr.K02143 Eucalyptus grandis HOM05D005553 ORTHO05D006866 7.7e-173 611.3 547 59.0
DCAR_023559 Daucus carota HOM05D005553 ORTHO05D006866 1.3e-172 610.5 526 62.4
Glyma.18G166600 Glycine max HOM05D005553 ORTHO05D006866 2.3e-172 609.8 543 61.3
CiPaw.03G146800 Carya illinoinensis HOM05D005553 ORTHO05D006866 2.9e-172 609.4 457 69.6
PSO339G3667 Papaver somniferum HOM05D005553 ORTHO05D006866 3.3e-171 605.9 545 58.9
Solyc09g059600.4 Solanum lycopersicum HOM05D005553 ORTHO05D006866 5.5e-171 605.1 540 59.4
Phvul.008G130400 Phaseolus vulgaris HOM05D005553 ORTHO05D006866 9.5e-171 604.4 534 61.0
Sopen09g022770 Solanum pennellii HOM05D005553 ORTHO05D006866 6.1e-170 601.7 539 59.0
Sc05g0002010 Simmondsia chinensis HOM05D005553 ORTHO05D006866 8.0e-170 601.3 551 59.9
CAN.G5.44 Capsicum annuum HOM05D005553 ORTHO05D006866 2.3e-169 599.7 527 59.4
Cc01_g16820 Coffea canephora HOM05D005553 ORTHO05D006866 3.0e-169 599.4 507 61.9
Lalb_Chr03g0041571 Lupinus albus HOM05D005553 ORTHO05D006866 5.7e-168 595.1 524 60.5
VMungo1383G1602 Vigna mungo HOM05D005553 ORTHO05D006866 5.7e-168 595.1 543 60.0
arahy.Tifrunner.gnm1.ann1.T3HSIJ Arachis hypogaea HOM05D005553 ORTHO05D006866 1.7e-167 593.6 530 58.7
Hund05570 Selenicereus undatus HOM05D005553 ORTHO05D006866 1.7e-167 593.6 539 58.3
arahy.Tifrunner.gnm1.ann1.K25WW2 Arachis hypogaea HOM05D005553 ORTHO05D006866 2.2e-167 593.2 521 59.9
Ca_24091_v3 Cicer arietinum L. HOM05D005553 ORTHO05D006866 2.8e-167 592.8 533 59.7
Nitab4.5_0000045g0420 Nicotiana tabacum HOM05D005553 ORTHO05D006866 6.3e-167 591.7 566 58.1
Medtr7g056117 Medicago truncatula HOM05D005553 ORTHO05D006866 1.4e-166 590.5 541 59.1
Ah.08g214520 Amaranthus hybridus HOM05D005553 ORTHO05D006866 2.4e-166 589.7 541 57.7
Lsat_1_v5_gn_9_13060 Lactuca sativa HOM05D005553 ORTHO05D006866 2.4e-166 589.7 546 57.9
Aqoxy2G03234 Aquilegia oxysepala HOM05D005553 ORTHO05D006866 3.5e-165 585.9 550 57.3
Glyma.08G349700 Glycine max HOM05D005553 ORTHO05D006866 2.9e-164 582.8 536 59.7
Lj1g0021333 Lotus japonicus HOM05D005553 ORTHO05D006866 5.0e-164 582.0 539 58.4
Haze_24835 Corylus avellana HOM05D005553 ORTHO05D006866 6.6e-164 581.6 538 60.0
Migut.N00626 Erythranthe guttata HOM05D005553 ORTHO05D006866 1.1e-163 580.9 547 57.4
Rhsim01G0254300 Rhododendron simsii HOM05D005553 ORTHO05D006866 1.2e-162 577.4 502 63.3
TPR.G6452 Trifolium pratense HOM05D005553 ORTHO05D006866 3.4e-160 569.3 615 53.5
Nitab4.5_0000345g0010 Nicotiana tabacum HOM05D005553 ORTHO05D006866 7.5e-160 568.2 571 56.2
MBI06_g04543_MAGBIO Magnolia biondii HOM05D005553 ORTHO05D006866 4.9e-159 565.5 538 57.2
FAN15G3597 Fragaria x ananassa HOM05D005553 ORTHO05D006866 7.0e-158 561.6 573 55.7
Psat3g147960 Pisum sativum HOM05D005553 ORTHO05D006866 9.2e-158 561.2 541 56.9
ECA247G0750 Erigeron canadensis HOM05D005553 ORTHO05D006866 3.5e-157 559.3 535 57.2
SHI14561 Sapria himalayana HOM05D005553 ORTHO05D006866 3.1e-153 546.2 571 53.2
ClCG09G008830 Citrullus lanatus HOM05D005553 ORTHO05D006866 3.4e-152 542.7 546 56.2
arahy.Tifrunner.gnm1.ann1.84RPTF Arachis hypogaea HOM05D005553 ORTHO05D006866 8.3e-151 538.1 524 55.7
EL10Ac7g17878 Beta vulgaris HOM05D005553 ORTHO05D006866 6.0e-149 531.9 531 54.8
TAR365G1156 Trochodendron aralioides HOM05D005553 ORTHO05D006866 6.0e-149 531.9 425 64.2
Actinidia09473 Actinidia chinensis HOM05D005553 ORTHO05D006866 2.3e-148 530.0 536 55.6
Haze_24838 Corylus avellana HOM05D005553 ORTHO05D006866 5.1e-148 528.9 428 65.7
arahy.Tifrunner.gnm1.ann1.62F6YN Arachis hypogaea HOM05D005553 ORTHO05D006866 1.6e-146 523.9 510 55.7
CDE08G1475 Ceratophyllum demersum HOM05D005553 ORTHO05D006866 1.9e-139 500.4 553 49.5
ATR0609G062 Amborella trichopoda HOM05D005553 ORTHO05D006866 3.3e-139 499.6 538 51.1
Actinidia23714 Actinidia chinensis HOM05D005553 ORTHO05D006866 3.1e-137 493.0 546 55.1
Peaxi162Scf00238g00217 Petunia axillaris HOM05D005553 ORTHO05D006866 7.6e-136 488.4 519 53.2
Dinv19184 Davidia involucrata HOM05D005553 ORTHO05D006866 1.3e-135 487.6 458 59.2
SalBow3G3653 Salvia bowleyana HOM05D005553 ORTHO05D006866 8.4e-135 485.0 480 56.5
AUR62001118 Chenopodium quinoa HOM05D005553 ORTHO05D006866 2.7e-133 479.9 530 49.8
Os01g0907300 Oryza sativa ssp. japonica HOM05D005553 ORTHO05D006866 2.7e-133 479.9 538 49.8
DCAR_000631 Daucus carota HOM05D005553 ORTHO05D006866 5.1e-132 475.7 526 52.9
Zm00001eb365330 Zea mays HOM05D005553 ORTHO05D006866 1.8e-129 467.2 514 51.2
Potri.002G244801 Populus trichocarpa HOM05D005553 ORTHO05D006866 7.6e-128 461.8 279 79.2
arahy.Tifrunner.gnm1.ann1.B0WXN9 Arachis hypogaea HOM05D005553 ORTHO05D006866 1.7e-124 450.7 523 49.9
AUR62016558 Chenopodium quinoa HOM05D005553 ORTHO05D006866 1.4e-118 431.0 530 47.5
unitig_0.g372 Utricularia gibba HOM05D005553 ORTHO05D006866 5.8e-104 382.5 514 44.7
Pp3c13_19160 Physcomitrium patens HOM05D005553 ORTHO05D006866 2.1e-101 374.0 568 40.1
SMO353G0187 Selaginella moellendorffii HOM05D005553 ORTHO05D006866 3.6e-93 346.7 511 39.9
Mapoly0045s0104 Marchantia polymorpha HOM05D005553 ORTHO05D006866 3.9e-92 343.2 555 36.9
QL05p022419 Quercus lobata HOM05D005553 ORTHO05D006866 5.7e-91 339.3 244 67.2
AagrBONN_evm.TU.Sc2ySwM_117.1632 Anthoceros agrestis HOM05D005553 ORTHO05D006866 5.9e-88 329.3 527 38.5
arahy.Tifrunner.gnm1.ann1.ET68I8 Arachis hypogaea HOM05D005553 ORTHO05D006866 1.1e-86 325.1 362 49.2
arahy.Tifrunner.gnm1.ann1.SPK719 Arachis hypogaea HOM05D005553 ORTHO05D006866 8.5e-79 298.9 366 46.7
QL02p097148 Quercus lobata HOM05D005553 ORTHO05D006866 7.2e-78 295.8 249 59.8
arahy.Tifrunner.gnm1.ann1.YI9T1V Arachis hypogaea HOM05D005553 ORTHO05D006866 1.4e-73 281.6 359 46.0
CBR_g46590 Chara braunii HOM05D005553 ORTHO05D006866 2.1e-53 214.5 386 33.4
arahy.Tifrunner.gnm1.ann1.DF0SS3 Arachis hypogaea HOM05D005553 ORTHO05D006866 1.8e-52 211.5 273 46.9
HPP92_001410 Vanilla planifolia HOM05D005553 ORTHO05D006866 2.9e-50 204.1 205 54.6
HPP92_001419 Vanilla planifolia HOM05D005553 ORTHO05D008496 1.3e-47 195.3 164 61.0
arahy.Tifrunner.gnm1.ann1.3A36EA Arachis hypogaea HOM05D005553 ORTHO05D006866 3.3e-38 164.1 112 71.4
SEGI_34191 Sequoiadendron giganteum HOM05D005553 ORTHO05D006866 3.6e-29 134.0 147 45.6
SEGI_35984 Sequoiadendron giganteum HOM05D005553 ORTHO05D006866 8.1e-29 132.9 270 34.8
A05p41020 Brassica napus HOM05D005553 ORTHO05D006866 1.3e-23 115.5 223 38.6
EL10Ac7g17877 Beta vulgaris HOM05D005553 ORTHO05D006866 5.4e-17 93.6 169 37.9
TAR365G0595 Trochodendron aralioides HOM05D005553 ORTHO05D006866 6.0e-16 90.1 91 57.1
Cre01.g013400 Chlamydomonas reinhardtii HOM05D005553 ORTHO05D006866 1.6e-13 82.0 423 22.9
arahy.Tifrunner.gnm1.ann1.UUY44J Arachis hypogaea HOM05D005553 ORTHO05D006866 3.1e-12 77.8 214 31.3
Cfa026900 Carpinus fangiana HOM05D005553 ORTHO05D006866 1.2e-11 75.9 480 23.5
VMungo1383G0327 Vigna mungo HOM05D005553 ORTHO05D006866 7.6e-11 73.2 78 52.6


User provided reference genes

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