Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib205G2017 Durio zibethinus HOM05D006677 ORTHO05D008348 0.0e+00 1531.2 752 100.0
Thecc.03G248200 Theobroma cacao HOM05D006677 ORTHO05D008348 0.0e+00 1314.3 798 82.3
COL.COLO4_37128 Corchorus olitorius HOM05D006677 ORTHO05D008348 0.0e+00 1277.3 797 79.9
Duzib068G0477 Durio zibethinus HOM05D006677 ORTHO05D008348 0.0e+00 1269.2 798 79.7
Gorai.008G233700 Gossypium raimondii HOM05D006677 ORTHO05D008348 0.0e+00 1245.3 800 78.4
Gohir.D12G218100 Gossypium hirsutum HOM05D006677 ORTHO05D008348 0.0e+00 1236.1 799 78.0
Gohir.A12G215500 Gossypium hirsutum HOM05D006677 ORTHO05D008348 0.0e+00 1222.2 799 77.7
CANSAT21G0792 Cannabis sativa HOM05D006677 ORTHO05D008348 2.8e-300 1035.0 801 63.8
Manes.02G041400 Manihot esculenta HOM05D006677 ORTHO05D008348 1.9e-285 985.7 800 62.8
Prupe.5G065400 Prunus persica HOM05D006677 ORTHO05D008348 2.6e-282 975.3 803 62.4
MD06G1053300 Malus domestica HOM05D006677 ORTHO05D008348 2.1e-279 965.7 813 61.9
RcHm_v2.0_Chr7g0203921 Rosa chinensis HOM05D006677 ORTHO05D008348 7.9e-279 963.8 792 62.4
MD04G1060300 Malus domestica HOM05D006677 ORTHO05D008348 2.2e-276 955.7 808 62.0
Ciclev10018892m.g Citrus clementina HOM05D006677 ORTHO05D008348 8.2e-276 953.7 812 61.6
Atru.chr9.1276 Acer truncatum HOM05D006677 ORTHO05D008348 1.1e-272 943.3 803 62.3
TWI60G0317 Tripterygium wilfordii HOM05D006677 ORTHO05D008348 7.2e-272 940.6 798 60.0
FAN13G0013 Fragaria x ananassa HOM05D006677 ORTHO05D008348 7.9e-271 937.2 794 60.8
FvH4_5g19410 Fragaria vesca HOM05D006677 ORTHO05D008348 1.0e-270 936.8 792 61.0
Cfa012688 Carpinus fangiana HOM05D006677 ORTHO05D008348 2.3e-270 935.6 802 61.8
Haze_07944 Corylus avellana HOM05D006677 ORTHO05D008348 3.3e-269 931.8 865 58.4
FAN04G1892 Fragaria x ananassa HOM05D006677 ORTHO05D008348 3.3e-269 931.8 792 60.6
TAR374G0600 Trochodendron aralioides HOM05D006677 ORTHO05D008348 7.4e-269 930.6 809 59.7
FAN18G1193 Fragaria x ananassa HOM05D006677 ORTHO05D008348 1.3e-268 929.9 792 60.7
CSS0025591 Camellia sinensis var. sinensis HOM05D006677 ORTHO05D008348 2.2e-268 929.1 794 59.8
Nitab4.5_0001381g0100 Nicotiana tabacum HOM05D006677 ORTHO05D008348 4.8e-268 927.9 790 59.0
FAN08G3018 Fragaria x ananassa HOM05D006677 ORTHO05D008348 4.1e-267 924.9 792 60.5
Hma1.2p1_0316F.1_g122840 Hydrangea macrophylla HOM05D006677 ORTHO05D008348 1.2e-266 923.3 798 59.3
PGR031G0681 Punica granatum HOM05D006677 ORTHO05D008348 2.6e-266 922.2 799 59.3
QL12p011426 Quercus lobata HOM05D006677 ORTHO05D008348 2.6e-266 922.2 860 58.3
Potri.001G155800 Populus trichocarpa HOM05D006677 ORTHO05D008348 1.7e-265 919.5 803 60.4
CiPaw.12G050300 Carya illinoinensis HOM05D006677 ORTHO05D008348 1.9e-264 916.0 803 61.0
Lj2C223G6 Lonicera japonica HOM05D006677 ORTHO05D008348 2.5e-264 915.6 801 59.2
Peaxi162Scf00209g00130 Petunia axillaris HOM05D006677 ORTHO05D008348 3.6e-263 911.8 795 58.9
Sopen08g026930 Solanum pennellii HOM05D006677 ORTHO05D008348 5.2e-262 907.9 795 57.2
THA.LOC104806670 Tarenaya hassleriana HOM05D006677 ORTHO05D008348 3.3e-261 905.2 798 58.9
Solyc08g078440.3 Solanum lycopersicum HOM05D006677 ORTHO05D008348 1.4e-259 899.8 795 57.0
CSS0006614 Camellia sinensis var. sinensis HOM05D006677 ORTHO05D008348 3.1e-259 898.7 794 58.3
CAN.G1178.20 Capsicum annuum HOM05D006677 ORTHO05D008348 5.9e-258 894.4 795 56.9
Rhsim07G0111300 Rhododendron simsii HOM05D006677 ORTHO05D008348 7.7e-258 894.0 798 59.3
Cc08_g12180 Coffea canephora HOM05D006677 ORTHO05D008348 2.5e-256 889.0 796 56.7
AUR62007111 Chenopodium quinoa HOM05D006677 ORTHO05D008348 5.5e-256 887.9 797 57.2
vmacro14066 Vaccinium macrocarpon HOM05D006677 ORTHO05D008348 7.2e-256 887.5 797 58.7
AL8G10640 Arabidopsis lyrata HOM05D006677 ORTHO05D008348 9.4e-256 887.1 800 57.6
Hund14577 Selenicereus undatus HOM05D006677 ORTHO05D008348 1.2e-255 886.7 797 56.7
Rhsim07G0110800 Rhododendron simsii HOM05D006677 ORTHO05D008348 1.6e-255 886.3 819 57.8
Sc22g0000980 Simmondsia chinensis HOM05D006677 ORTHO05D008348 1.4e-254 883.2 797 56.6
AT5G47400 Arabidopsis thaliana HOM05D006677 ORTHO05D008348 4.4e-253 878.2 802 56.9
MSTRG.12123 Avicennia marina HOM05D006677 ORTHO05D008348 4.8e-252 874.8 792 55.8
Nn6g33880 Nelumbo nucifera HOM05D006677 ORTHO05D008348 4.8e-252 874.8 810 56.2
EL10Ac5g12357 Beta vulgaris HOM05D006677 ORTHO05D008348 1.4e-251 873.2 796 56.3
Manes.01G083200 Manihot esculenta HOM05D006677 ORTHO05D008348 1.4e-251 873.2 799 57.1
CARHR173970 Cardamine hirsuta HOM05D006677 ORTHO05D008348 7.0e-251 870.9 800 56.9
AUR62019973 Chenopodium quinoa HOM05D006677 ORTHO05D008348 3.5e-250 868.6 795 56.2
Sp2g12115 Schrenkiella parvula HOM05D006677 ORTHO05D008348 5.0e-249 864.8 802 56.6
Thhalv10000783m.g Eutrema salsugineum HOM05D006677 ORTHO05D008348 4.2e-248 861.7 800 56.4
Nitab4.5_0002289g0120 Nicotiana tabacum HOM05D006677 ORTHO05D008348 2.7e-247 859.0 795 55.8
Migut.A01134 Erythranthe guttata HOM05D006677 ORTHO05D008348 8.0e-247 857.4 806 55.5
SGA_v2.0_scaffold104G30177 Striga asiatica HOM05D006677 ORTHO05D008348 3.0e-246 855.5 820 53.3
Carub.0008s0038 Capsella rubella HOM05D006677 ORTHO05D008348 5.7e-245 851.3 800 56.4
BcaC06g34255 Brassica carinata HOM05D006677 ORTHO05D008348 1.7e-244 849.7 802 56.7
Ah.12g054330 Amaranthus hybridus HOM05D006677 ORTHO05D008348 4.8e-244 848.2 800 55.0
C07p31040 Brassica napus HOM05D006677 ORTHO05D008348 4.8e-244 848.2 803 56.5
BolC7t43648H Brassica oleracea HOM05D006677 ORTHO05D008348 1.4e-243 846.7 801 56.3
arahy.Tifrunner.gnm1.ann1.WU4RWF Arachis hypogaea HOM05D006677 ORTHO05D008348 1.1e-240 837.0 815 55.3
DCAR_004989 Daucus carota HOM05D006677 ORTHO05D008348 5.2e-238 828.2 797 53.6
arahy.Tifrunner.gnm1.ann1.IBE8NF Arachis hypogaea HOM05D006677 ORTHO05D008348 6.8e-238 827.8 815 54.7
A06p45110 Brassica napus HOM05D006677 ORTHO05D008348 2.6e-237 825.9 800 55.1
Lalb_Chr05g0221161 Lupinus albus HOM05D006677 ORTHO05D008348 4.4e-237 825.1 799 55.7
BraA06t27381Z Brassica rapa HOM05D006677 ORTHO05D008348 2.4e-235 819.3 800 54.9
Aa31sc151G40 Aethionema arabicum HOM05D006677 ORTHO05D008348 3.5e-234 815.5 762 56.4
Aqoxy7G00821 Aquilegia oxysepala HOM05D006677 ORTHO05D008348 5.0e-233 811.6 808 52.6
SalBow6G5281 Salvia bowleyana HOM05D006677 ORTHO05D008348 3.3e-232 808.9 853 49.5
HanXRQChr16g0501081 Helianthus annuus HOM05D006677 ORTHO05D008348 2.1e-231 806.2 804 53.0
Ca_21980_v3 Cicer arietinum L. HOM05D006677 ORTHO05D008348 3.6e-231 805.4 810 54.6
Dinv21656 Davidia involucrata HOM05D006677 ORTHO05D008348 5.2e-230 801.6 636 63.8
Lj4g0000262 Lotus japonicus HOM05D006677 ORTHO05D008348 4.1e-227 792.0 802 54.5
Glyma.17G143800 Glycine max HOM05D006677 ORTHO05D008348 2.9e-220 769.2 806 54.5
Medtr4g100700 Medicago truncatula HOM05D006677 ORTHO05D008348 1.4e-219 766.9 809 51.9
VMungo0251G0668 Vigna mungo HOM05D006677 ORTHO05D008348 9.5e-216 754.2 801 53.2
Phvul.003G222500 Phaseolus vulgaris HOM05D006677 ORTHO05D008348 1.6e-215 753.4 806 53.3
Lsat_1_v5_gn_6_18041 Lactuca sativa HOM05D006677 ORTHO05D008348 4.0e-214 748.8 808 50.1
Actinidia26803 Actinidia chinensis HOM05D006677 ORTHO05D008348 1.5e-213 746.9 640 60.3
Psat4g072920 Pisum sativum HOM05D006677 ORTHO05D008348 4.9e-212 741.9 792 51.4
ECA233G6125 Erigeron canadensis HOM05D006677 ORTHO05D008348 8.1e-207 724.5 748 52.5
HanXRQChr08g0227751 Helianthus annuus HOM05D006677 ORTHO05D008348 1.1e-203 714.1 809 48.6
Oeu017057.2 Olea europaea HOM05D006677 ORTHO05D008348 2.7e-202 709.5 831 48.0
CDE11G0086 Ceratophyllum demersum HOM05D006677 ORTHO05D008348 1.7e-201 706.8 801 47.3
BcaC06g31390 Brassica carinata HOM05D006677 ORTHO05D008348 1.1e-200 704.1 670 55.8
Eucgr.D02100 Eucalyptus grandis HOM05D006677 ORTHO05D008348 4.4e-197 692.2 585 61.4
BcaC06g31392 Brassica carinata HOM05D006677 ORTHO05D008348 7.6e-197 691.4 790 50.6
HPP92_022463 Vanilla planifolia HOM05D006677 ORTHO05D008348 1.1e-192 677.6 813 46.0
Sabra01G0125500 Salix brachista HOM05D006677 ORTHO05D008348 3.6e-191 672.5 648 55.9
ATR0057G118 Amborella trichopoda HOM05D006677 ORTHO05D008348 1.2e-157 561.2 818 40.6
Glyma.05G062000 Glycine max HOM05D006677 ORTHO05D008348 3.6e-146 523.1 608 50.8
Zm00001eb000330 Zea mays HOM05D006677 ORTHO05D008348 1.6e-130 471.1 795 37.2
Actinidia10841 Actinidia chinensis HOM05D006677 ORTHO05D008348 3.6e-130 469.9 744 40.6
unitig_21.g20314 Utricularia gibba HOM05D006677 ORTHO05D008348 1.4e-121 441.4 749 36.4
TPR.G36090 Trifolium pratense HOM05D006677 ORTHO05D008348 2.6e-96 357.5 422 49.3
GSVIVG01006276001 Vitis vinifera HOM05D006677 ORTHO05D008348 9.5e-91 339.0 262 65.3
GSVIVG01006275001 Vitis vinifera HOM05D006677 ORTHO05D000005 1.3e-87 328.6 238 68.1
Pp3c19_23280 Physcomitrium patens HOM05D006677 ORTHO05D008348 3.2e-86 323.9 849 30.5
Cpa.g.sc3684.1 Carica papaya HOM05D006677 ORTHO05D008348 2.7e-85 320.9 241 65.6
TPR.G37689 Trifolium pratense HOM05D006677 ORTHO05D008348 4.8e-82 310.1 252 59.9
TAR365G0661 Trochodendron aralioides HOM05D006677 ORTHO05D008348 5.6e-75 286.6 279 54.5
DCAR_004986 Daucus carota HOM05D006677 ORTHO05D008348 7.3e-75 286.2 238 57.1
AagrBONN_evm.TU.Sc2ySwM_228.2440 Anthoceros agrestis HOM05D006677 ORTHO05D008348 2.1e-74 284.6 855 28.7
DCAR_004979 Daucus carota HOM05D006677 ORTHO05D008348 6.2e-74 283.1 238 56.3
DCAR_004983 Daucus carota HOM05D006677 ORTHO05D008348 4.5e-56 223.8 223 49.8
DCAR_004974 Daucus carota HOM05D006677 ORTHO05D008348 1.1e-54 219.2 200 52.0
TAR633G2042 Trochodendron aralioides HOM05D006677 ORTHO05D008348 7.9e-53 213.0 194 58.8
TAR629G1120 Trochodendron aralioides HOM05D006677 ORTHO05D008348 2.7e-45 188.0 149 61.1
CAN.G26.36 Capsicum annuum HOM05D006677 ORTHO05D008348 2.5e-38 164.9 168 51.2
Os10g0560500 Oryza sativa ssp. japonica HOM05D006677 ORTHO05D008348 3.1e-33 147.9 280 36.4
CBR_g16835 Chara braunii HOM05D000019 ORTHO05D000048 7.7e-32 143.3 684 23.4
DCAR_004972 Daucus carota HOM05D006677 ORTHO05D008348 4.5e-24 117.5 115 50.4
MCO13G224 Micromonas commoda HOM05D006677 ORTHO05D008348 5.4e-17 94.0 597 21.6
CAN.G1178.24 Capsicum annuum HOM05D006677 ORTHO05D008348 1.6e-13 82.4 72 51.4
Cre06.g278126 Chlamydomonas reinhardtii HOM05D006677 ORTHO05D008348 8.0e-13 80.1 193 30.6
TPR.G36480 Trifolium pratense HOM05D004733 ORTHO05D008348 1.4e-12 79.3 44 77.3
DCAR_004984 Daucus carota HOM05D006677 ORTHO05D008348 3.4e-11 74.7 40 80.0


User provided reference genes

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