Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib205G2009 Durio zibethinus HOM05D007311 ORTHO05D009011 5.7e-80 300.8 148 100.0
Gohir.D08G169100 Gossypium hirsutum HOM05D007311 ORTHO05D009011 3.1e-70 268.5 148 86.5
COL.COLO4_16729 Corchorus olitorius HOM05D007311 ORTHO05D009011 5.3e-70 267.7 148 84.5
Thecc.03G322100 Theobroma cacao HOM05D007311 ORTHO05D009011 2.2e-68 262.3 154 84.4
Gohir.A08G147900 Gossypium hirsutum HOM05D007311 ORTHO05D009011 5.5e-67 257.7 148 82.4
CiPaw.11G077300 Carya illinoinensis HOM05D007311 ORTHO05D009011 5.7e-64 247.7 148 78.4
QL12p002522 Quercus lobata HOM05D007311 ORTHO05D009011 1.3e-63 246.5 148 77.7
Gorai.004G176300 Gossypium raimondii HOM05D007311 ORTHO05D009011 2.8e-63 245.4 186 67.7
GSVIVG01036913001 Vitis vinifera HOM05D007311 ORTHO05D009011 3.7e-63 245.0 148 75.7
RcHm_v2.0_Chr7g0214961 Rosa chinensis HOM05D007311 ORTHO05D009011 8.2e-63 243.8 148 75.7
Manes.15G187600 Manihot esculenta HOM05D007311 ORTHO05D009011 7.0e-62 240.7 148 77.0
Prupe.5G015700 Prunus persica HOM05D007311 ORTHO05D009011 1.2e-61 240.0 148 77.7
Glyma.19G247100 Glycine max HOM05D007311 ORTHO05D009011 1.6e-61 239.6 148 75.0
TWI32G0505 Tripterygium wilfordii HOM05D007311 ORTHO05D009011 3.5e-61 238.4 148 75.0
Ciclev10002031m.g Citrus clementina HOM05D007311 ORTHO05D009011 4.5e-61 238.0 148 74.3
MD16G1286900 Malus domestica HOM05D007311 ORTHO05D009011 5.9e-61 237.7 148 75.0
FAN08G0573 Fragaria x ananassa HOM05D007311 ORTHO05D009011 1.0e-60 236.9 144 75.7
Glyma.03G249600 Glycine max HOM05D007311 ORTHO05D009011 1.0e-60 236.9 148 73.0
Nn3g18546 Nelumbo nucifera HOM05D007311 ORTHO05D009011 1.3e-60 236.5 147 74.1
Lalb_Chr15g0076111 Lupinus albus HOM05D007311 ORTHO05D009011 2.9e-60 235.3 148 73.6
Lj1g0003439 Lotus japonicus HOM05D007311 ORTHO05D009011 3.8e-60 235.0 148 73.6
Aqoxy102s011 Aquilegia oxysepala HOM05D007311 ORTHO05D009011 5.0e-60 234.6 148 70.3
Aqoxy2G03516 Aquilegia oxysepala HOM05D007311 ORTHO05D009011 5.0e-60 234.6 148 70.3
arahy.Tifrunner.gnm1.ann1.C28JQA Arachis hypogaea HOM05D007311 ORTHO05D009011 1.1e-59 233.4 148 71.6
arahy.Tifrunner.gnm1.ann1.M0M2WX Arachis hypogaea HOM05D007311 ORTHO05D009011 1.1e-59 233.4 148 71.6
Phvul.006G104200 Phaseolus vulgaris HOM05D007311 ORTHO05D009011 1.5e-59 233.0 148 73.6
TAR629G0827 Trochodendron aralioides HOM05D007311 ORTHO05D009011 2.5e-59 232.3 148 74.3
FAN18G0784 Fragaria x ananassa HOM05D007311 ORTHO05D009011 7.2e-59 230.7 172 65.1
VMungo0540G0453 Vigna mungo HOM05D007311 ORTHO05D009011 7.2e-59 230.7 148 72.3
Cfa012633 Carpinus fangiana HOM05D007311 ORTHO05D009011 9.4e-59 230.3 136 77.9
Potri.003G106700 Populus trichocarpa HOM05D007311 ORTHO05D009011 9.4e-59 230.3 149 74.5
FvH4_5g24490 Fragaria vesca HOM05D007311 ORTHO05D009011 1.6e-58 229.6 172 64.5
Solyc08g075070.3 Solanum lycopersicum HOM05D007311 ORTHO05D009011 1.6e-58 229.6 146 74.7
THA.LOC104811225 Tarenaya hassleriana HOM05D007311 ORTHO05D009011 1.6e-58 229.6 148 69.6
Migut.E01383 Erythranthe guttata HOM05D007311 ORTHO05D009011 2.1e-58 229.2 148 71.6
PGR031G0344 Punica granatum HOM05D007311 ORTHO05D009011 8.0e-58 227.3 148 69.6
ClCG07G011190 Citrullus lanatus HOM05D000351 ORTHO05D000250 3.0e-57 225.3 148 68.2
MELO3C016211.2 Cucumis melo HOM05D007311 ORTHO05D009011 3.0e-57 225.3 148 68.9
CsaV3_4G007060 Cucumis sativus L. HOM05D007311 ORTHO05D009011 8.8e-57 223.8 148 68.2
MSTRG.1753 Avicennia marina HOM05D007311 ORTHO05D009011 1.5e-56 223.0 148 69.6
Nitab4.5_0000623g0080 Nicotiana tabacum HOM05D007311 ORTHO05D009011 1.5e-56 223.0 146 69.9
Aa31LG6G2000 Aethionema arabicum HOM05D007311 ORTHO05D009011 2.0e-56 222.6 148 69.6
Cc01_g03300 Coffea canephora HOM05D007311 ORTHO05D009011 2.0e-56 222.6 148 72.3
Peaxi162Scf00330g01216 Petunia axillaris HOM05D007311 ORTHO05D009011 2.6e-56 222.2 146 68.5
SalBow3G0367 Salvia bowleyana HOM05D007311 ORTHO05D009011 3.3e-56 221.9 146 71.9
Sabra03G0073500 Salix brachista HOM05D007311 ORTHO05D009011 5.7e-56 221.1 149 69.8
Ca_09529_v3 Cicer arietinum L. HOM05D007311 ORTHO05D009011 7.5e-56 220.7 148 72.3
Oeu031947.3 Olea europaea HOM05D007311 ORTHO05D009011 9.7e-56 220.3 168 63.7
CAN.G22.34 Capsicum annuum HOM05D007311 ORTHO05D009011 1.3e-55 219.9 146 70.5
Nitab4.5_0007008g0080 Nicotiana tabacum HOM05D007311 ORTHO05D009011 1.3e-55 219.9 146 69.2
Haze_08033 Corylus avellana HOM05D007311 ORTHO05D009011 2.2e-55 219.2 213 54.0
Hma1.2p1_0294F.1_g116450 Hydrangea macrophylla HOM05D007311 ORTHO05D009011 2.2e-55 219.2 145 70.3
TPR.G7011 Trifolium pratense HOM05D007311 ORTHO05D009011 2.2e-55 219.2 148 70.9
Lsat_1_v5_gn_9_12020 Lactuca sativa HOM05D007311 ORTHO05D009011 3.7e-55 218.4 148 68.2
DCAR_030948 Daucus carota HOM05D007311 ORTHO05D009011 4.8e-55 218.0 148 70.9
Psat0s3161g0160 Pisum sativum HOM05D007311 ORTHO05D009011 4.8e-55 218.0 148 72.3
Sed0011898 Sechium edule HOM05D000351 ORTHO05D000250 1.1e-54 216.9 145 67.6
HanXRQChr07g0198461 Helianthus annuus HOM05D007311 ORTHO05D009011 5.3e-54 214.5 149 65.8
BcaC09g51414 Brassica carinata HOM05D007311 ORTHO05D009011 1.6e-53 213.0 148 65.5
ECA233G4235 Erigeron canadensis HOM05D007311 ORTHO05D009011 2.0e-53 212.6 151 67.5
BraA01t01079Z Brassica rapa HOM05D007311 ORTHO05D009011 2.7e-53 212.2 148 64.9
CANSAT35G1819 Cannabis sativa HOM05D000351 ORTHO05D000250 2.7e-53 212.2 153 68.0
PSO210G1792 Papaver somniferum HOM05D007311 ORTHO05D009011 2.7e-53 212.2 146 66.4
vmacro22112 Vaccinium macrocarpon HOM05D007311 ORTHO05D009011 2.7e-53 212.2 171 63.2
A01p11360 Brassica napus HOM05D000351 ORTHO05D009011 5.9e-53 211.1 148 64.2
Thhalv10024796m.g Eutrema salsugineum HOM05D000351 ORTHO05D009011 5.9e-53 211.1 148 64.9
Medtr7g115450 Medicago truncatula HOM05D007311 ORTHO05D009011 5.9e-53 211.1 148 68.2
Medtr7g115470 Medicago truncatula HOM05D007311 ORTHO05D009011 5.9e-53 211.1 148 68.2
C01p13360 Brassica napus HOM05D007311 ORTHO05D009011 7.7e-53 210.7 148 64.9
AUR62039076 Chenopodium quinoa HOM05D007311 ORTHO05D009011 7.7e-53 210.7 148 65.5
Eucgr.E01832 Eucalyptus grandis HOM05D007311 ORTHO05D009011 7.7e-53 210.7 149 66.4
Sp7g18020 Schrenkiella parvula HOM05D007311 ORTHO05D009011 7.7e-53 210.7 148 64.9
PSO238G0022 Papaver somniferum HOM05D007311 ORTHO05D009011 1.7e-52 209.5 146 65.8
CDE11G0786 Ceratophyllum demersum HOM05D007311 ORTHO05D009011 3.8e-52 208.4 148 64.9
SGA_v2.0_scaffold144G35891 Striga asiatica HOM05D007311 ORTHO05D009011 3.8e-52 208.4 165 63.6
Carub.0007s2183 Capsella rubella HOM05D007311 ORTHO05D009011 5.0e-52 208.0 149 63.8
CARHR226190 Cardamine hirsuta HOM05D007311 ORTHO05D009011 6.5e-52 207.6 148 64.2
AT4G19400 Arabidopsis thaliana HOM05D007311 ORTHO05D009011 1.1e-51 206.8 149 64.4
AT4G19410 Arabidopsis thaliana HOM05D000351 ORTHO05D009011 1.1e-51 206.8 149 64.4
PGSC0003DMG400020814 Solanum tuberosum HOM05D007311 ORTHO05D009011 1.1e-51 206.8 174 59.8
BcaNung01781 Brassica carinata HOM05D007311 ORTHO05D009011 2.5e-51 205.7 148 62.2
unitig_899.g14733 Utricularia gibba HOM05D007311 ORTHO05D009011 3.2e-51 205.3 149 65.1
AL7G34740 Arabidopsis lyrata HOM05D007311 ORTHO05D009011 5.5e-51 204.5 149 63.8
ATR0796G066 Amborella trichopoda HOM05D007311 ORTHO05D009011 7.2e-51 204.1 148 64.2
MBI03_g29283_MAGBIO Magnolia biondii HOM05D006174 ORTHO05D007987 1.2e-50 203.4 131 71.0
Sc18g0005580 Simmondsia chinensis HOM05D007311 ORTHO05D009011 2.1e-50 202.6 134 71.6
EL10Ac9g22274 Beta vulgaris HOM05D007311 ORTHO05D009011 2.7e-50 202.2 148 63.5
Hund06317 Selenicereus undatus HOM05D007311 ORTHO05D009011 4.7e-50 201.4 148 62.8
HPP92_005283 Vanilla planifolia HOM05D007311 ORTHO05D009011 8.0e-50 200.7 144 63.9
QL12p002612 Quercus lobata HOM05D007311 ORTHO05D009011 2.3e-49 199.1 147 63.9
Cpa.g.sc542.2 Carica papaya HOM05D007311 ORTHO05D009011 1.3e-47 193.4 124 71.8
Zm00001eb284430 Zea mays HOM05D007311 ORTHO05D009011 4.5e-45 184.9 145 56.6
AUR62010310 Chenopodium quinoa HOM05D007311 ORTHO05D009011 3.8e-44 181.8 120 70.0
CSS0046759 Camellia sinensis var. sinensis HOM05D007311 ORTHO05D009011 4.2e-43 178.3 113 77.9
Dinv37446 Davidia involucrata HOM05D007311 ORTHO05D009011 1.1e-38 163.7 104 74.0
Os05g0241400 Oryza sativa ssp. japonica HOM05D007311 ORTHO05D009011 4.5e-37 158.3 119 56.3
Sopen08g023700 Solanum pennellii HOM05D007311 ORTHO05D009011 1.1e-35 153.7 92 77.2
TWI60G1527 Tripterygium wilfordii HOM05D007311 ORTHO05D009011 2.3e-33 146.0 148 52.0
Ah.01g011070 Amaranthus hybridus HOM05D007311 ORTHO05D009011 4.6e-29 131.7 104 61.5
SEGI_31752 Sequoiadendron giganteum HOM05D007311 ORTHO05D009011 2.8e-26 122.5 101 51.5
AagrBONN_evm.TU.Sc2ySwM_228.4293 Anthoceros agrestis HOM05D007311 ORTHO05D009011 2.0e-24 116.3 145 33.8
Eucgr.E01790 Eucalyptus grandis HOM05D007311 ORTHO05D009011 1.6e-21 106.7 82 63.4
Eucgr.E01869 Eucalyptus grandis HOM05D007311 ORTHO05D009011 2.1e-21 106.3 66 71.2
SalBow8G5581 Salvia bowleyana HOM05D007311 ORTHO05D009011 3.0e-20 102.4 65 75.4
SalBow1G6002 Salvia bowleyana HOM05D007311 ORTHO05D009011 1.5e-19 100.1 64 75.0
BcaC02g07636 Brassica carinata HOM05D007311 ORTHO05D009011 9.5e-19 97.4 103 49.5
Ciclev10003443m.g Citrus clementina HOM05D007311 ORTHO05D009011 1.2e-18 97.1 77 58.4
Rhsim07G0141400 Rhododendron simsii HOM05D000351 ORTHO05D000250 6.8e-17 91.3 121 45.5
SMO139G0010 Selaginella moellendorffii HOM05D007311 ORTHO05D009011 8.9e-17 90.9 146 34.9
Mapoly0040s0015 Marchantia polymorpha HOM05D007311 ORTHO05D009011 5.4e-14 81.6 134 29.9
FAN13G1634 Fragaria x ananassa HOM05D007311 ORTHO05D009011 1.3e-12 77.0 45 71.1
Medtr5g045430 Medicago truncatula HOM05D007311 ORTHO05D009011 5.1e-12 75.1 66 56.1
Zm00001eb347540 Zea mays HOM05D007311 ORTHO05D009011 1.6e-10 70.1 66 47.0
Ca_12103_v3 Cicer arietinum L. HOM05D007311 ORTHO05D009011 1.4e-09 67.0 38 76.3
Medtr2g084355 Medicago truncatula HOM05D003237 ORTHO05D003631 2.4e-06 56.2 44 61.4


User provided reference genes

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