Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib205G1981 Durio zibethinus HOM05D002266 ORTHO05D010337 1.3e-241 839.3 431 100.0
Gohir.A07G046600 Gossypium hirsutum HOM05D002266 ORTHO05D010337 5.2e-174 614.8 437 75.7
Gorai.001G054000 Gossypium raimondii HOM05D002266 ORTHO05D010337 1.2e-173 613.6 437 75.7
Gohir.D07G050900 Gossypium hirsutum HOM05D002266 ORTHO05D010337 3.3e-173 612.1 437 75.5
Thecc.03G141000 Theobroma cacao HOM05D002266 ORTHO05D010337 2.0e-165 586.3 431 73.8
COL.COLO4_37262 Corchorus olitorius HOM05D002266 ORTHO05D010337 3.9e-121 439.1 323 72.8
TWI23G1291 Tripterygium wilfordii HOM05D002266 ORTHO05D010337 1.5e-109 400.6 420 54.0
Manes.14G044300 Manihot esculenta HOM05D002266 ORTHO05D010337 3.2e-107 392.9 421 53.7
Atru.chr6.1922 Acer truncatum HOM05D002266 ORTHO05D010337 1.8e-102 377.1 434 53.2
Atru.chr6.1924 Acer truncatum HOM05D002266 ORTHO05D010337 1.8e-102 377.1 434 53.2
Hma1.2p1_0452F.1_g155980 Hydrangea macrophylla HOM05D002266 ORTHO05D010337 1.3e-100 370.9 427 51.1
Lj5C86T8 Lonicera japonica HOM05D002266 ORTHO05D010337 1.9e-96 357.1 419 51.1
Rhsim08G0198000 Rhododendron simsii HOM05D002266 ORTHO05D010337 1.6e-95 354.0 444 47.7
Sabra12G0079800 Salix brachista HOM05D002266 ORTHO05D010337 5.8e-93 345.5 429 48.5
Potri.012G108900 Populus trichocarpa HOM05D002266 ORTHO05D010337 1.0e-92 344.7 414 48.8
Ciclev10033782m.g Citrus clementina HOM05D002266 ORTHO05D010337 6.5e-92 342.0 430 48.8
Prupe.5G140800 Prunus persica HOM05D002266 ORTHO05D010337 3.7e-79 299.7 412 46.1
QL10p000420 Quercus lobata HOM05D002266 ORTHO05D010337 2.4e-78 297.0 417 45.8
Cc04_g05840 Coffea canephora HOM05D002266 ORTHO05D010337 1.3e-76 291.2 415 45.5
Thhalv10005642m.g Eutrema salsugineum HOM05D002266 ORTHO05D010337 8.5e-76 288.5 396 43.7
AL8G38630 Arabidopsis lyrata HOM05D002266 ORTHO05D010337 1.9e-75 287.3 397 44.6
Carub.0008s2256 Capsella rubella HOM05D002266 ORTHO05D010337 3.2e-75 286.6 396 43.9
AT5G61865 Arabidopsis thaliana HOM05D002266 ORTHO05D010337 9.4e-75 285.0 395 44.3
DCAR_025647 Daucus carota HOM05D002266 ORTHO05D010337 2.1e-74 283.9 433 41.1
Migut.D01181 Erythranthe guttata HOM05D002266 ORTHO05D010337 3.9e-73 279.6 422 43.1
HanXRQChr05g0155381 Helianthus annuus HOM05D002266 ORTHO05D010337 8.8e-73 278.5 418 42.6
MD14G1146800 Malus domestica HOM05D002266 ORTHO05D010337 1.1e-72 278.1 380 45.0
CARHR275630 Cardamine hirsuta HOM05D002266 ORTHO05D010337 2.0e-72 277.3 396 42.9
Aqoxy3G02681 Aquilegia oxysepala HOM05D002266 ORTHO05D010337 8.2e-71 271.9 434 39.6
BcaC01g02442 Brassica carinata HOM05D002266 ORTHO05D010337 8.2e-71 271.9 395 43.5
C03p65250 Brassica napus HOM05D002266 ORTHO05D010337 8.2e-71 271.9 395 43.5
BolC3t18778H Brassica oleracea HOM05D002266 ORTHO05D010337 8.2e-71 271.9 395 43.5
Sp2g25060 Schrenkiella parvula HOM05D002266 ORTHO05D010337 2.0e-69 267.3 402 41.8
BraA06t25800Z Brassica rapa HOM05D002266 ORTHO05D010337 3.5e-69 266.5 397 43.3
A06p28540 Brassica napus HOM05D002266 ORTHO05D010337 5.9e-69 265.8 395 43.3
BcaB02g09608 Brassica carinata HOM05D002266 ORTHO05D010337 7.7e-69 265.4 392 42.6
RcHm_v2.0_Chr7g0188601 Rosa chinensis HOM05D002266 ORTHO05D010337 3.8e-68 263.1 412 43.4
SGA_v2.0_scaffold74G24650 Striga asiatica HOM05D002266 ORTHO05D010337 1.9e-67 260.8 424 40.1
Actinidia25516 Actinidia chinensis HOM05D002266 ORTHO05D010337 4.2e-67 259.6 324 47.5
THA.LOC104818284 Tarenaya hassleriana HOM05D002266 ORTHO05D010337 2.3e-65 253.8 399 42.1
Nitab4.5_0002584g0010 Nicotiana tabacum HOM05D002266 ORTHO05D010337 6.7e-65 252.3 422 41.2
FAN04G1258 Fragaria x ananassa HOM05D002266 ORTHO05D010337 3.3e-64 250.0 400 42.0
FvH4_5g09640 Fragaria vesca HOM05D002266 ORTHO05D010337 4.4e-64 249.6 400 42.5
Nitab4.5_0008403g0020 Nicotiana tabacum HOM05D002266 ORTHO05D010337 4.4e-64 249.6 432 38.9
Aa31LG11G1630 Aethionema arabicum HOM05D002266 ORTHO05D010337 6.3e-63 245.7 395 40.8
Solyc12g042340.2 Solanum lycopersicum HOM05D002266 ORTHO05D010337 8.2e-63 245.4 423 39.5
Peaxi162Scf00135g01413 Petunia axillaris HOM05D002266 ORTHO05D010337 9.1e-62 241.9 412 40.5
Cpa.g.sc13.178 Carica papaya HOM05D002266 ORTHO05D010337 2.0e-61 240.7 246 57.3
Sopen12g021270 Solanum pennellii HOM05D002266 ORTHO05D010337 5.9e-61 239.2 341 43.4
Lsat_1_v5_gn_5_10020 Lactuca sativa HOM05D002266 ORTHO05D010337 2.2e-60 237.3 411 38.2
Oeu013660.2 Olea europaea HOM05D002266 ORTHO05D010337 3.6e-58 229.9 366 41.0
FAN18G2616 Fragaria x ananassa HOM05D002266 ORTHO05D010337 5.7e-56 222.6 372 41.4
Dinv13716 Davidia involucrata HOM05D002266 ORTHO05D010337 3.5e-53 213.4 239 52.7
MBI07_g35979_MAGBIO Magnolia biondii HOM05D002266 ORTHO05D010337 3.8e-52 209.9 331 43.2
SalBow1G8312 Salvia bowleyana HOM05D002266 ORTHO05D010337 5.0e-52 209.5 398 36.2
FAN13G2170 Fragaria x ananassa HOM05D002266 ORTHO05D010337 1.6e-50 204.5 371 39.6
PSO339G3582 Papaver somniferum HOM05D002266 ORTHO05D010337 6.1e-50 202.6 359 40.1
unitig_747.g21318 Utricularia gibba HOM05D002266 ORTHO05D010337 8.8e-49 198.7 333 39.0
FAN08G1259 Fragaria x ananassa HOM05D002266 ORTHO05D010337 6.1e-42 176.0 386 35.2
PGSC0003DMG400014448 Solanum tuberosum HOM05D002266 ORTHO05D010337 3.0e-41 173.7 335 36.7
SEGI_02612 Sequoiadendron giganteum HOM05D002266 ORTHO05D000002 7.3e-19 99.4 350 26.0
Cpa.g.sc13.177 Carica papaya HOM05D002266 ORTHO05D010337 1.9e-14 84.7 198 36.9
Sabra13G0033600 Salix brachista HOM05D002266 ORTHO05D010337 7.8e-13 79.3 73 61.6
AagrBONN_evm.TU.Sc2ySwM_228.1887 Anthoceros agrestis HOM05D002266 ORTHO05D010337 2.4e-06 57.8 232 27.2


User provided reference genes

Program Settings