Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib205G1649 Durio zibethinus HOM05D007298 ORTHO05D009226 4.6e-155 551.2 281 100.0
Thecc.03G118900 Theobroma cacao HOM05D007298 ORTHO05D009226 1.6e-115 419.9 292 78.8
COL.COLO4_37432 Corchorus olitorius HOM05D007298 ORTHO05D009226 1.8e-114 416.4 299 76.3
Gohir.A12G186800 Gossypium hirsutum HOM05D007298 ORTHO05D009226 6.7e-98 361.3 287 70.4
Gohir.D12G189800 Gossypium hirsutum HOM05D007298 ORTHO05D009226 6.7e-98 361.3 287 70.7
Gorai.008G203600 Gossypium raimondii HOM05D007298 ORTHO05D009226 4.4e-97 358.6 287 70.0
CiPaw.13G179900 Carya illinoinensis HOM05D007298 ORTHO05D009226 4.0e-82 308.9 291 64.3
Cfa009528 Carpinus fangiana HOM05D007298 ORTHO05D009226 1.5e-81 307.0 293 62.8
Sabra01G0000900 Salix brachista HOM05D007298 ORTHO05D009226 9.1e-79 297.7 291 59.8
Potri.001G001000 Populus trichocarpa HOM05D007298 ORTHO05D009226 8.5e-77 291.2 274 62.4
Haze_22918 Corylus avellana HOM05D007298 ORTHO05D009226 7.0e-71 271.6 297 58.9
Actinidia30606 Actinidia chinensis HOM05D007298 ORTHO05D009226 1.2e-70 270.8 284 55.6
ClCG06G017280 Citrullus lanatus HOM05D007298 ORTHO05D009226 1.2e-70 270.8 275 58.9
MELO3C026268.2 Cucumis melo HOM05D007298 ORTHO05D009226 5.9e-70 268.5 288 56.6
CsaV3_1G001220 Cucumis sativus L. HOM05D007298 ORTHO05D009226 1.7e-69 266.9 288 56.6
Sed0017427 Sechium edule HOM05D007298 ORTHO05D009226 2.9e-69 266.2 288 55.6
Psat7g113280 Pisum sativum HOM05D007298 ORTHO05D009226 3.8e-69 265.8 287 56.4
TPR.G16338 Trifolium pratense HOM05D007298 ORTHO05D009226 1.1e-68 264.2 293 54.9
VMungo0251G1522 Vigna mungo HOM05D007298 ORTHO05D009226 3.6e-67 259.2 286 54.5
Lj4g0005920 Lotus japonicus HOM05D007298 ORTHO05D009226 4.7e-67 258.8 286 54.2
Hma1.2p1_1436F.1_g283160 Hydrangea macrophylla HOM05D007298 ORTHO05D009226 6.1e-67 258.5 291 57.0
vmacro16084 Vaccinium macrocarpon HOM05D007298 ORTHO05D009226 6.1e-67 258.5 293 55.3
TAR623G1587 Trochodendron aralioides HOM05D007298 ORTHO05D009226 8.9e-66 254.6 277 58.1
MBI13_g02430_MAGBIO Magnolia biondii HOM05D007298 ORTHO05D009226 1.5e-65 253.8 290 54.8
Lalb_Chr16g0383911 Lupinus albus HOM05D007298 ORTHO05D009226 2.6e-65 253.1 292 52.4
Phvul.002G230700 Phaseolus vulgaris HOM05D007298 ORTHO05D009226 5.7e-65 251.9 283 54.1
TWI32G0891 Tripterygium wilfordii HOM05D007298 ORTHO05D009226 6.3e-64 248.4 277 56.7
PGR119G1464 Punica granatum HOM05D007298 ORTHO05D009226 1.2e-62 244.2 281 53.4
Nn2g15906 Nelumbo nucifera HOM05D007298 ORTHO05D009226 2.0e-62 243.4 297 51.9
Lalb_Chr09g0327771 Lupinus albus HOM05D007298 ORTHO05D009226 3.5e-62 242.7 290 51.4
Medtr4g088515 Medicago truncatula HOM05D000062 ORTHO05D000043 7.8e-62 241.5 273 54.2
Aqoxy2G04036 Aquilegia oxysepala HOM05D007298 ORTHO05D009226 2.3e-61 240.0 273 54.6
Rhsim12G0097800 Rhododendron simsii HOM05D007298 ORTHO05D009226 3.8e-61 239.2 273 53.8
CSS0015764 Camellia sinensis var. sinensis HOM05D007298 ORTHO05D009226 6.6e-61 238.4 282 54.3
Lalb_Chr05g0218531 Lupinus albus HOM05D007298 ORTHO05D009226 6.6e-61 238.4 285 49.5
QL01p007822 Quercus lobata HOM05D007298 ORTHO05D009226 6.6e-61 238.4 283 55.5
Cc11_g17470 Coffea canephora HOM05D007298 ORTHO05D009226 1.5e-60 237.3 290 52.4
arahy.Tifrunner.gnm1.ann1.IS7ZQD Arachis hypogaea HOM05D002349 ORTHO05D002464 7.3e-60 235.0 291 49.8
arahy.Tifrunner.gnm1.ann1.MB6W4F Arachis hypogaea HOM05D002349 ORTHO05D002464 7.3e-60 235.0 291 49.8
Ca_18576_v3 Cicer arietinum L. HOM05D007298 ORTHO05D009226 2.1e-59 233.4 281 51.2
Nitab4.5_0007554g0010 Nicotiana tabacum HOM05D007298 ORTHO05D009226 2.1e-59 233.4 290 51.0
Glyma.07G199400 Glycine max HOM05D007298 ORTHO05D009226 4.7e-59 232.3 292 50.7
Duzib084G1143 Durio zibethinus HOM05D007298 ORTHO05D009226 8.0e-59 231.5 207 65.7
Nn7g35796 Nelumbo nucifera HOM05D007298 ORTHO05D009226 1.4e-58 230.7 300 49.3
Peaxi162Scf00128g01770 Petunia axillaris HOM05D007298 ORTHO05D009226 2.6e-57 226.5 288 49.3
Eucgr.J01725 Eucalyptus grandis HOM05D007298 ORTHO05D009226 4.4e-57 225.7 293 50.2
Nitab4.5_0008442g0010 Nicotiana tabacum HOM05D007298 ORTHO05D009226 4.4e-57 225.7 291 46.0
Glyma.13G177000 Glycine max HOM05D007298 ORTHO05D009226 1.1e-55 221.1 296 49.3
PGSC0003DMG400025413 Solanum tuberosum HOM05D007298 ORTHO05D009226 3.5e-54 216.1 279 48.0
Ciclev10017525m.g Citrus clementina HOM05D007298 ORTHO05D009226 1.0e-53 214.5 247 55.5
Dinv31519 Davidia involucrata HOM05D007298 ORTHO05D009226 3.9e-53 212.6 230 57.8
MD11G1000700 Malus domestica HOM05D007298 ORTHO05D009226 6.6e-53 211.8 281 52.0
Manes.15G111000 Manihot esculenta HOM05D007298 ORTHO05D009226 5.6e-52 208.8 284 48.6
Sc05g0003880 Simmondsia chinensis HOM05D007298 ORTHO05D009226 3.6e-51 206.1 304 46.7
Nitab4.5_0001600g0070 Nicotiana tabacum HOM05D005538 ORTHO05D007055 4.7e-51 205.7 272 48.9
Actinidia09612 Actinidia chinensis HOM05D007298 ORTHO05D009226 3.1e-50 203.0 276 49.3
Migut.K01030 Erythranthe guttata HOM05D007298 ORTHO05D009226 4.4e-49 199.1 266 48.5
Sed0020092 Sechium edule HOM05D007298 ORTHO05D009226 2.9e-48 196.4 218 54.6
AUR62008624 Chenopodium quinoa HOM05D007298 ORTHO05D009226 3.7e-48 196.1 248 52.0
AT4G26415 Arabidopsis thaliana HOM05D007298 ORTHO05D009226 1.4e-47 194.1 310 42.6
RcHm_v2.0_Chr5g0084091 Rosa chinensis HOM05D007298 ORTHO05D009226 7.0e-47 191.8 307 45.9
FvH4_3g45980 Fragaria vesca HOM05D007298 ORTHO05D009226 9.2e-47 191.4 291 45.7
Carub.0007s1454 Capsella rubella HOM05D007298 ORTHO05D009226 1.2e-46 191.0 310 43.5
Sp7g24320 Schrenkiella parvula HOM05D007298 ORTHO05D009226 1.0e-45 188.0 306 43.5
THA.LOC104813474 Tarenaya hassleriana HOM05D007298 ORTHO05D009226 1.0e-45 188.0 305 43.6
Prupe.6G001000 Prunus persica HOM05D007298 ORTHO05D009226 1.3e-45 187.6 329 45.3
Sopen05g018720 Solanum pennellii HOM05D007298 ORTHO05D009226 1.3e-45 187.6 270 44.4
FAN16G2589 Fragaria x ananassa HOM05D007298 ORTHO05D009226 3.0e-45 186.4 292 44.9
A03p56680 Brassica napus HOM05D007298 ORTHO05D009226 3.3e-44 183.0 306 42.8
C07p54880 Brassica napus HOM05D007298 ORTHO05D009226 3.3e-44 183.0 307 42.7
BolC7t45976H Brassica oleracea HOM05D007298 ORTHO05D009226 3.3e-44 183.0 307 42.7
BraA03t14738Z Brassica rapa HOM05D007298 ORTHO05D009226 3.3e-44 183.0 306 42.8
AL7G26540 Arabidopsis lyrata HOM05D007298 ORTHO05D009226 4.3e-44 182.6 291 42.3
Lsat_1_v5_gn_4_2201 Lactuca sativa HOM05D007298 ORTHO05D009226 7.3e-44 181.8 282 43.3
Solyc05g024020.1 Solanum lycopersicum HOM05D007298 ORTHO05D009226 1.2e-43 181.0 267 44.6
BcaC06g32750 Brassica carinata HOM05D007298 ORTHO05D009226 8.1e-43 178.3 287 43.2
EL10Ac4g07728 Beta vulgaris HOM05D007298 ORTHO05D009226 1.1e-42 177.9 231 49.8
AUR62033147 Chenopodium quinoa HOM05D007298 ORTHO05D009226 1.1e-42 177.9 233 50.2
Thhalv10026008m.g Eutrema salsugineum HOM05D007298 ORTHO05D009226 3.1e-42 176.4 290 42.8
Hma1.2p1_0459F.1_g157260 Hydrangea macrophylla HOM05D007298 ORTHO05D009226 8.9e-42 174.9 236 50.0
CARHR233970 Cardamine hirsuta HOM05D007298 ORTHO05D009226 1.5e-41 174.1 257 47.5
CANSAT11G1103 Cannabis sativa HOM05D007298 ORTHO05D009226 9.9e-41 171.4 230 50.9
FAN11G2203 Fragaria x ananassa HOM05D007298 ORTHO05D009226 8.3e-40 168.3 275 44.4
BcaNung02423 Brassica carinata HOM05D007298 ORTHO05D009226 1.4e-39 167.5 296 42.2
DCAR_006996 Daucus carota HOM05D007298 ORTHO05D009226 1.9e-39 167.2 369 37.7
ATR0068G085 Amborella trichopoda HOM05D007298 ORTHO05D009226 5.4e-39 165.6 331 39.0
FAN21G1139 Fragaria x ananassa HOM05D007298 ORTHO05D009226 7.1e-39 165.2 276 42.8
Cpa.g.sc119.13 Carica papaya HOM05D007298 ORTHO05D009226 9.2e-39 164.9 274 43.8
FAN25G2175 Fragaria x ananassa HOM05D007298 ORTHO05D009226 1.2e-38 164.5 276 43.8
SGA_v2.0_scaffold9G04794 Striga asiatica HOM05D002076 ORTHO05D002087 1.6e-38 164.1 275 40.0
Ah.08g213460 Amaranthus hybridus HOM05D007298 ORTHO05D009226 3.0e-37 159.8 276 42.4
HanXRQChr12g0385721 Helianthus annuus HOM05D007298 ORTHO05D009226 5.6e-36 155.6 199 48.2
unitig_22.g6385 Utricularia gibba HOM05D007298 ORTHO05D009226 3.1e-34 149.8 221 44.3
DCAR_006994 Daucus carota HOM05D007298 ORTHO05D009226 6.8e-34 148.7 355 36.3
SalBow2G0405 Salvia bowleyana HOM05D007298 ORTHO05D009226 2.9e-32 143.3 253 40.7
SalBow2G1404 Salvia bowleyana HOM05D007298 ORTHO05D009226 2.9e-32 143.3 253 40.7
Glyma.15G076400 Glycine max HOM05D007298 ORTHO05D009226 2.1e-30 137.1 221 41.6
Zm00001eb127960 Zea mays HOM05D007298 ORTHO05D009226 6.0e-30 135.6 224 43.3
Glyma.13G237100 Glycine max HOM05D007298 ORTHO05D009226 5.2e-26 122.5 127 53.5
Phvul.006G183700 Phaseolus vulgaris HOM05D007298 ORTHO05D009226 2.7e-22 110.2 213 38.5
CDE07G0295 Ceratophyllum demersum HOM05D000114 ORTHO05D000038 7.3e-20 102.1 118 54.2
Nitab4.5_0000340g0060 Nicotiana tabacum HOM05D007298 ORTHO05D009226 1.6e-14 84.3 96 46.9
C01p22270 Brassica napus HOM05D007298 ORTHO05D009226 3.8e-08 63.2 131 42.0
SEGI_13333 Sequoiadendron giganteum HOM05D007298 ORTHO05D009226 3.8e-08 63.2 159 35.2
BcaC01g06536 Brassica carinata HOM05D007298 ORTHO05D009226 8.4e-08 62.0 99 44.4
BcaC09g50700 Brassica carinata HOM05D007298 ORTHO05D009226 2.4e-07 60.5 99 44.4
BolC1t02157H Brassica oleracea HOM05D007298 ORTHO05D009226 2.4e-07 60.5 99 44.4


User provided reference genes

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