Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib205G1497 Durio zibethinus HOM05D007115 ORTHO05D008923 5.6e-119 431.0 229 100.0
Thecc.03G130400 Theobroma cacao HOM05D007115 ORTHO05D008923 1.1e-101 373.6 229 83.0
Haze_07151 Corylus avellana HOM05D007115 ORTHO05D008923 4.6e-89 331.6 230 74.8
Cfa018785 Carpinus fangiana HOM05D007115 ORTHO05D008923 3.7e-86 322.0 231 74.0
CiPaw.12G043900 Carya illinoinensis HOM05D007115 ORTHO05D008923 1.8e-85 319.7 229 73.8
Cpa.g.sc13.101 Carica papaya HOM05D007115 ORTHO05D008923 5.9e-84 314.7 229 69.9
Sabra15G0118300 Salix brachista HOM05D007115 ORTHO05D008923 5.0e-83 311.6 228 69.7
Hma1.2p1_0014F.1_g009320 Hydrangea macrophylla HOM05D007115 ORTHO05D008923 6.5e-83 311.2 228 71.5
Potri.015G097700 Populus trichocarpa HOM05D007115 ORTHO05D008923 8.5e-83 310.8 228 69.3
TWI39G0929 Tripterygium wilfordii HOM05D007115 ORTHO05D008923 1.9e-82 309.7 231 69.3
Dinv23157 Davidia involucrata HOM05D007115 ORTHO05D008923 3.2e-82 308.9 229 71.2
Atru.chr6.1807 Acer truncatum HOM05D007115 ORTHO05D008923 5.5e-82 308.1 228 68.9
QL10p002688 Quercus lobata HOM05D007115 ORTHO05D008923 2.3e-80 302.8 283 60.8
Manes.14G050500 Manihot esculenta HOM05D007115 ORTHO05D008923 3.3e-79 298.9 231 68.4
Gorai.007G042800 Gossypium raimondii HOM05D007115 ORTHO05D008923 9.7e-79 297.4 221 73.8
Gohir.D11G039800 Gossypium hirsutum HOM05D007115 ORTHO05D008923 2.8e-78 295.8 211 73.0
Hund02448 Selenicereus undatus HOM05D007115 ORTHO05D008923 4.8e-78 295.0 221 67.0
GSVIVG01008566001 Vitis vinifera HOM05D007115 ORTHO05D008923 6.3e-78 294.7 223 67.7
Sc04g0000560 Simmondsia chinensis HOM05D007115 ORTHO05D008923 1.8e-77 293.1 227 67.4
Lj5A95G76 Lonicera japonica HOM05D007115 ORTHO05D008923 2.4e-77 292.7 194 73.7
Gohir.A11G036350 Gossypium hirsutum HOM05D007115 ORTHO05D008923 1.2e-76 290.4 178 82.0
Actinidia25565 Actinidia chinensis HOM05D007115 ORTHO05D008923 3.5e-76 288.9 235 64.3
Glyma.06G169300 Glycine max HOM05D007115 ORTHO05D008923 5.9e-76 288.1 230 65.7
Ca_16052_v3 Cicer arietinum L. HOM05D007115 ORTHO05D008923 1.7e-75 286.6 227 67.8
Prupe.5G150000 Prunus persica HOM05D007115 ORTHO05D008923 2.2e-75 286.2 226 63.7
Ciclev10032623m.g Citrus clementina HOM05D007115 ORTHO05D008923 2.9e-75 285.8 192 76.6
Glyma.04G196500 Glycine max HOM05D007115 ORTHO05D008923 2.9e-75 285.8 220 66.8
FvH4_5g08420 Fragaria vesca HOM05D007115 ORTHO05D008923 3.8e-75 285.4 224 64.3
FAN13G1038 Fragaria x ananassa HOM05D007115 ORTHO05D008923 3.8e-75 285.4 224 64.3
RcHm_v2.0_Chr7g0190021 Rosa chinensis HOM05D007115 ORTHO05D008923 3.8e-75 285.4 224 64.7
FAN04G1902 Fragaria x ananassa HOM05D007115 ORTHO05D008923 6.5e-75 284.6 224 64.3
VMungo1309G2111 Vigna mungo HOM05D007115 ORTHO05D008923 1.1e-74 283.9 221 67.4
Rhsim08G0191000 Rhododendron simsii HOM05D007115 ORTHO05D008923 1.4e-74 283.5 230 63.9
Oeu004998.1 Olea europaea HOM05D007115 ORTHO05D008923 4.2e-74 282.0 226 65.0
Medtr3g099140 Medicago truncatula HOM05D007115 ORTHO05D008923 9.4e-74 280.8 227 66.1
FAN08G1896 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.6e-73 280.0 224 63.4
FAN18G3505 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.6e-73 280.0 224 63.8
Nitab4.5_0000624g0110 Nicotiana tabacum HOM05D007115 ORTHO05D008923 1.6e-73 280.0 236 62.3
Nitab4.5_0001311g0160 Nicotiana tabacum HOM05D007115 ORTHO05D008923 2.1e-73 279.6 231 62.3
Phvul.009G165800 Phaseolus vulgaris HOM05D007115 ORTHO05D008923 2.1e-73 279.6 170 80.0
CSS0028949 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 2.7e-73 279.3 239 65.3
ATR0790G002 Amborella trichopoda HOM05D007115 ORTHO05D008923 6.1e-73 278.1 170 77.1
vmacro19121 Vaccinium macrocarpon HOM05D007115 ORTHO05D008923 8.0e-73 277.7 231 61.9
CSS0028892 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 1.0e-72 277.3 239 65.3
CANSAT80G2203 Cannabis sativa HOM05D007115 ORTHO05D008923 1.0e-72 277.3 194 71.1
Lsat_1_v5_gn_1_33120 Lactuca sativa HOM05D007115 ORTHO05D008923 1.0e-72 277.3 240 62.1
Aqoxy5G03328 Aquilegia oxysepala HOM05D007115 ORTHO05D008923 1.4e-72 276.9 224 64.3
ClCG03G003830 Citrullus lanatus HOM05D007115 ORTHO05D008923 3.9e-72 275.4 225 64.9
MD06G1140800 Malus domestica HOM05D007115 ORTHO05D008923 1.1e-71 273.9 230 61.3
THA.LOC104811583 Tarenaya hassleriana HOM05D007115 ORTHO05D008923 1.1e-71 273.9 226 62.8
PGSC0003DMG400015264 Solanum tuberosum HOM05D007115 ORTHO05D008923 1.5e-71 273.5 229 62.4
Lj1g0010129 Lotus japonicus HOM05D007115 ORTHO05D008923 2.0e-71 273.1 227 65.2
CsaV3_1G009730 Cucumis sativus L. HOM05D007115 ORTHO05D008923 5.7e-71 271.6 228 62.7
HanXRQChr02g0034681 Helianthus annuus HOM05D007115 ORTHO05D008923 5.7e-71 271.6 235 64.7
MELO3C002367.2 Cucumis melo HOM05D007115 ORTHO05D008923 4.8e-70 268.5 229 62.0
PGR083G2674 Punica granatum HOM05D007115 ORTHO05D008923 4.8e-70 268.5 171 78.4
AUR62034838 Chenopodium quinoa HOM05D007115 ORTHO05D008923 8.2e-70 267.7 170 75.3
Lalb_Chr11g0069511 Lupinus albus HOM05D007115 ORTHO05D008923 1.4e-69 266.9 197 68.5
Solyc03g019660.4 Solanum lycopersicum HOM05D007115 ORTHO05D008923 1.8e-69 266.5 217 63.6
EL10Ac5g11401 Beta vulgaris HOM05D007115 ORTHO05D008923 2.4e-69 266.2 196 70.4
Sopen03g029960 Solanum pennellii HOM05D007115 ORTHO05D008923 4.1e-69 265.4 230 62.2
TPR.G14207 Trifolium pratense HOM05D007115 ORTHO05D008923 9.1e-69 264.2 222 67.1
MSTRG.11273 Avicennia marina HOM05D007115 ORTHO05D008923 3.5e-68 262.3 187 69.0
CDE02G1164 Ceratophyllum demersum HOM05D007115 ORTHO05D008923 1.3e-67 260.4 227 59.9
CAN.G1611.7 Capsicum annuum HOM05D007115 ORTHO05D008923 2.2e-67 259.6 187 68.4
Peaxi162Scf00089g00121 Petunia axillaris HOM05D007115 ORTHO05D008923 3.8e-67 258.8 239 59.4
Cc04_g09720 Coffea canephora HOM05D007115 ORTHO05D008923 5.0e-67 258.5 245 63.3
ECA247G2755 Erigeron canadensis HOM05D001512 ORTHO05D001574 9.4e-66 254.2 166 72.3
DCAR_007496 Daucus carota HOM05D007115 ORTHO05D008923 2.1e-65 253.1 244 57.8
Eucgr.B00101 Eucalyptus grandis HOM05D007115 ORTHO05D008923 2.1e-65 253.1 175 72.6
AL7G28270 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 3.6e-65 252.3 231 57.6
unitig_8.g3030 Utricularia gibba HOM05D007115 ORTHO05D008923 8.0e-65 251.1 199 60.8
Carub.0007s1613 Capsella rubella HOM05D007115 ORTHO05D008923 1.8e-64 250.0 229 56.3
AT4G24930 Arabidopsis thaliana HOM05D007115 ORTHO05D008923 5.2e-64 248.4 228 57.0
TAR622G0416 Trochodendron aralioides HOM05D007115 ORTHO05D008923 1.5e-63 246.9 134 86.6
Migut.I00540 Erythranthe guttata HOM05D007115 ORTHO05D008923 7.5e-63 244.6 246 56.1
Aa31LG7G10860 Aethionema arabicum HOM05D007115 ORTHO05D008923 1.3e-62 243.8 240 54.2
Thhalv10026135m.g Eutrema salsugineum HOM05D007115 ORTHO05D008923 1.1e-61 240.7 193 64.2
BcaNung06011 Brassica carinata HOM05D007115 ORTHO05D008923 4.1e-61 238.8 230 57.4
BolC1t01950H Brassica oleracea HOM05D007115 ORTHO05D008923 5.3e-61 238.4 224 58.0
CARHR232330 Cardamine hirsuta HOM05D007115 ORTHO05D008923 7.0e-61 238.0 228 55.3
PSO017G0512 Papaver somniferum HOM05D007115 ORTHO05D008923 1.2e-60 237.3 218 59.6
Nn4g22293 Nelumbo nucifera HOM05D007115 ORTHO05D008923 2.7e-60 236.1 137 81.8
Sp7g22910 Schrenkiella parvula HOM05D007115 ORTHO05D008923 2.7e-60 236.1 193 63.2
A01p16220 Brassica napus HOM05D007115 ORTHO05D008923 2.2e-59 233.0 232 55.6
BraA01t01558Z Brassica rapa HOM05D007115 ORTHO05D008923 2.2e-59 233.0 232 55.6
C01p20210 Brassica napus HOM05D007115 ORTHO05D008923 6.5e-59 231.5 169 67.5
SalBow5G3672 Salvia bowleyana HOM05D007115 ORTHO05D008923 1.6e-57 226.9 253 52.6
HPP92_023120 Vanilla planifolia HOM05D007115 ORTHO05D008923 2.7e-57 226.1 168 64.3
SGA_v2.0_scaffold258G45802 Striga asiatica HOM05D007115 ORTHO05D008923 1.4e-56 223.8 275 49.1
arahy.Tifrunner.gnm1.ann1.YTW6SU Arachis hypogaea HOM05D007115 ORTHO05D008923 3.0e-48 196.1 169 60.9
COL.COLO4_28141 Corchorus olitorius HOM05D007115 ORTHO05D008923 2.4e-45 186.4 99 90.9
Zm00001eb334110 Zea mays HOM05D007115 ORTHO05D008923 2.5e-42 176.4 148 61.5
Pp3c6_23090 Physcomitrium patens HOM05D007115 ORTHO05D008923 8.9e-40 167.9 160 52.5
AUR62029602 Chenopodium quinoa HOM05D007115 ORTHO05D008923 7.5e-39 164.9 99 76.8
Os01g0102300 Oryza sativa ssp. japonica HOM05D007115 ORTHO05D008923 3.7e-38 162.5 173 50.9
Psat5g051920 Pisum sativum HOM05D007115 ORTHO05D008923 4.6e-36 155.6 134 59.7
MBI11_g41395_MAGBIO Magnolia biondii HOM05D007115 ORTHO05D008923 3.9e-35 152.5 97 75.3
arahy.Tifrunner.gnm1.ann1.BUY811 Arachis hypogaea HOM05D007115 ORTHO05D008923 5.0e-35 152.1 97 75.3
SMO356G0600 Selaginella moellendorffii HOM05D007115 ORTHO05D008923 1.4e-32 144.1 152 46.7
Sed0002696 Sechium edule HOM05D007115 ORTHO05D008923 6.8e-24 115.2 125 53.6
Actinidia18342 Actinidia chinensis HOM05D007115 ORTHO05D008923 3.4e-23 112.8 64 76.6
ATR0405G001 Amborella trichopoda HOM05D007115 ORTHO05D008923 4.4e-23 112.5 63 82.5
SEGI_00544 Sequoiadendron giganteum HOM05D007115 ORTHO05D008923 8.3e-22 108.2 89 57.3
Ah.02g114850 Amaranthus hybridus HOM05D007115 ORTHO05D008923 7.1e-21 105.1 127 55.9
FAN18G1815 Fragaria x ananassa HOM05D007115 ORTHO05D008923 5.8e-15 85.5 61 65.6
Sabra12G0072200 Salix brachista HOM05D007115 ORTHO05D008923 6.4e-14 82.0 61 68.9
FAN13G2062 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.4e-13 80.9 63 63.5
Cre17.g714900 Chlamydomonas reinhardtii HOM05D007115 ORTHO05D008923 4.6e-12 75.9 159 29.6
Actinidia18341 Actinidia chinensis HOM05D000804 ORTHO05D000989 1.0e-11 74.7 99 47.5
MCO03G440 Micromonas commoda HOM05D007115 ORTHO05D008923 8.7e-11 71.6 146 30.8
AL6G46780 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 1.6e-09 67.4 95 44.2
FAN04G0070 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.8e-08 63.9 55 56.4
PRCOL_00005130 Prasinoderma coloniale HOM05D003314 ORTHO05D004164 4.0e-08 62.8 111 33.3


User provided reference genes

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