Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib205G1447 Durio zibethinus HOM05D007991 ORTHO05D010158 3.0e-65 251.9 146 100.0
COL.COLO4_28875 Corchorus olitorius HOM05D007991 ORTHO05D010158 6.3e-15 84.7 88 58.0
COL.COLO4_04148 Corchorus olitorius HOM05D007991 ORTHO05D010158 3.1e-14 82.4 53 75.5
Manes.06G170500 Manihot esculenta HOM05D007991 ORTHO05D010158 2.6e-13 79.3 79 63.3
Manes.06G170901 Manihot esculenta HOM05D007991 ORTHO05D010158 3.5e-13 79.0 79 63.3
TWI39G0184 Tripterygium wilfordii HOM05D007991 ORTHO05D010158 1.0e-12 77.4 78 59.0
Lsat_1_v5_gn_7_112301 Lactuca sativa HOM05D007991 ORTHO05D010158 1.3e-12 77.0 58 65.5
Prupe.4G140900 Prunus persica HOM05D007991 ORTHO05D010158 1.3e-12 77.0 56 66.1
GSVIVG01035227001 Vitis vinifera HOM05D007991 ORTHO05D010158 1.3e-12 77.0 75 61.3
PGR042G3415 Punica granatum HOM05D007991 ORTHO05D010158 1.7e-12 76.6 51 72.5
Gorai.007G003200 Gossypium raimondii HOM05D007991 ORTHO05D010158 5.0e-12 75.1 53 69.8
Ciclev10023629m.g Citrus clementina HOM05D007991 ORTHO05D010158 6.5e-12 74.7 72 55.6
Aqoxy6G00820 Aquilegia oxysepala HOM05D007991 ORTHO05D010158 1.5e-11 73.6 74 56.8
GSVIVG01012568001 Vitis vinifera HOM05D007991 ORTHO05D010158 1.5e-11 73.6 78 59.0
Aa31LG8G190 Aethionema arabicum HOM05D007991 ORTHO05D010158 2.5e-11 72.8 70 54.3
Atru.chr8.1056 Acer truncatum HOM05D007991 ORTHO05D010158 3.2e-11 72.4 71 59.2
Medtr2g069650 Medicago truncatula HOM05D007991 ORTHO05D010158 3.2e-11 72.4 82 52.4
Lalb_Chr03g0031611 Lupinus albus HOM05D007991 ORTHO05D010158 4.2e-11 72.0 51 68.6
AT3G12960 Arabidopsis thaliana HOM05D007991 ORTHO05D010158 5.5e-11 71.6 51 66.7
HanXRQChr11g0334671 Helianthus annuus HOM05D007991 ORTHO05D010158 5.5e-11 71.6 55 65.5
Lj3g0014492 Lotus japonicus HOM05D007991 ORTHO05D010158 7.2e-11 71.2 58 58.6
AL3G24640 Arabidopsis lyrata HOM05D007991 ORTHO05D010158 9.4e-11 70.9 51 66.7
Cpa.g.sc10.36 Carica papaya HOM05D007991 ORTHO05D010158 9.4e-11 70.9 79 53.2
Gohir.D11G002200 Gossypium hirsutum HOM05D007991 ORTHO05D010158 9.4e-11 70.9 53 66.0
Peaxi162Scf00452g00812 Petunia axillaris HOM05D007991 ORTHO05D010158 2.1e-10 69.7 55 60.0
Carub.0003s1230 Capsella rubella HOM05D007991 ORTHO05D010158 2.7e-10 69.3 51 64.7
CsaV3_4G031820 Cucumis sativus L. HOM05D005971 ORTHO05D007459 2.7e-10 69.3 77 53.2
RcHm_v2.0_Chr5g0026701 Rosa chinensis HOM05D007991 ORTHO05D010158 2.7e-10 69.3 86 48.8
Lalb_Chr19g0133391 Lupinus albus HOM05D007991 ORTHO05D010158 4.7e-10 68.6 75 54.7
PGSC0003DMG400022239 Solanum tuberosum HOM05D007991 ORTHO05D010158 4.7e-10 68.6 55 61.8
EL10Ac4g08566 Beta vulgaris HOM05D007991 ORTHO05D010158 6.1e-10 68.2 66 59.1
CAN.G943.33 Capsicum annuum HOM05D007991 ORTHO05D010158 8.0e-10 67.8 55 60.0
Ca_03685_v3 Cicer arietinum L. HOM05D007991 ORTHO05D010158 8.0e-10 67.8 66 59.1
ClCG11G016360 Citrullus lanatus HOM05D007991 ORTHO05D010158 8.0e-10 67.8 72 56.9
ClCG11G016370 Citrullus lanatus HOM05D007991 ORTHO05D010158 8.0e-10 67.8 72 56.9
Solyc07g066400.1 Solanum lycopersicum HOM05D007991 ORTHO05D010158 8.0e-10 67.8 55 60.0
FAN25G2658 Fragaria x ananassa HOM05D007991 ORTHO05D010158 1.0e-09 67.4 64 54.7
Gohir.A11G002600 Gossypium hirsutum HOM05D007991 ORTHO05D010158 1.0e-09 67.4 82 52.4
BcaC09g48284 Brassica carinata HOM05D007991 ORTHO05D010158 1.4e-09 67.0 51 62.7
C01p52180 Brassica napus HOM05D007991 ORTHO05D010158 1.4e-09 67.0 51 62.7
BolC1t05158H Brassica oleracea HOM05D007991 ORTHO05D010158 1.4e-09 67.0 51 62.7
CARHR087490 Cardamine hirsuta HOM05D007991 ORTHO05D010158 1.4e-09 67.0 59 62.7
ECA236G0423 Erigeron canadensis HOM05D007991 ORTHO05D010158 1.4e-09 67.0 59 61.0
Glyma.08G172800 Glycine max HOM05D007991 ORTHO05D010158 1.8e-09 66.6 76 48.7
Psat1g011440 Pisum sativum HOM05D007991 ORTHO05D010158 1.8e-09 66.6 52 61.5
Cfa019429 Carpinus fangiana HOM05D007991 ORTHO05D010158 3.0e-09 65.9 48 64.6
Phvul.005G056100 Phaseolus vulgaris HOM05D007991 ORTHO05D010158 3.0e-09 65.9 52 59.6
TPR.G9765 Trifolium pratense HOM05D007991 ORTHO05D010158 3.0e-09 65.9 88 52.3
Sopen07g034570 Solanum pennellii HOM05D007991 ORTHO05D010158 4.0e-09 65.5 55 60.0
Sc16g0005380 Simmondsia chinensis HOM05D007991 ORTHO05D010158 5.2e-09 65.1 59 57.6
MD05G1219200 Malus domestica HOM05D007991 ORTHO05D010158 6.7e-09 64.7 88 47.7
QL04p074011 Quercus lobata HOM05D007991 ORTHO05D010158 8.8e-09 64.3 74 51.4
Thhalv10022193m.g Eutrema salsugineum HOM05D007991 ORTHO05D010158 1.2e-08 63.9 70 50.0
FAN16G1552 Fragaria x ananassa HOM05D007991 ORTHO05D010158 1.2e-08 63.9 86 47.7
MELO3C010561.2 Cucumis melo HOM05D007991 ORTHO05D010158 2.0e-08 63.2 90 45.6
FAN11G2864 Fragaria x ananassa HOM05D007991 ORTHO05D010158 2.0e-08 63.2 98 41.8
FAN21G1902 Fragaria x ananassa HOM05D007991 ORTHO05D010158 2.0e-08 63.2 98 41.8
Sp3g11110 Schrenkiella parvula HOM05D007991 ORTHO05D010158 2.0e-08 63.2 51 60.8
Ah.07g206310 Amaranthus hybridus HOM05D007991 ORTHO05D010158 2.6e-08 62.8 85 42.4
CSS0001388 Camellia sinensis var. sinensis HOM05D007991 ORTHO05D010158 3.3e-08 62.4 70 54.3
Nn7g37867 Nelumbo nucifera HOM05D007991 ORTHO05D010158 4.4e-08 62.0 84 46.4
Nitab4.5_0008437g0010 Nicotiana tabacum HOM05D007991 ORTHO05D010158 5.7e-08 61.6 55 58.2
BcaB04g21024 Brassica carinata HOM05D007991 ORTHO05D010158 2.2e-07 59.7 84 44.0
BraA01t04089Z Brassica rapa HOM05D007991 ORTHO05D010158 2.2e-07 59.7 79 46.8
CSS0033446 Camellia sinensis var. sinensis HOM05D007991 ORTHO05D010158 2.8e-07 59.3 51 60.8
CANSAT80G1088 Cannabis sativa HOM05D007991 ORTHO05D010158 2.8e-07 59.3 83 43.4
unitig_8.g4768 Utricularia gibba HOM05D007991 ORTHO05D010158 4.8e-07 58.5 55 58.2
CiPaw.04G012700 Carya illinoinensis HOM05D007991 ORTHO05D010158 8.2e-07 57.8 88 45.5
Sed0025657 Sechium edule HOM05D007991 ORTHO05D010158 8.2e-07 57.8 76 52.6
MBI02_g12653_MAGBIO Magnolia biondii HOM05D007991 ORTHO05D010158 4.1e-06 55.5 75 45.3


User provided reference genes

Program Settings