Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib205G1434 Durio zibethinus HOM05D005292 ORTHO05D006473 8.3e-188 660.2 333 100.0
Duzib084G0213 Durio zibethinus HOM05D005292 ORTHO05D006473 1.4e-150 536.6 408 71.3
Thecc.03G261400 Theobroma cacao HOM05D005292 ORTHO05D006473 2.7e-146 522.3 408 70.1
COL.COLO4_31983 Corchorus olitorius HOM05D005292 ORTHO05D006473 2.4e-139 499.2 409 67.2
Gohir.D12G223000 Gossypium hirsutum HOM05D005292 ORTHO05D006473 3.9e-137 491.9 408 66.9
Gohir.D03G157800 Gossypium hirsutum HOM05D005292 ORTHO05D006473 2.5e-136 489.2 408 66.2
Gohir.A03G012000 Gossypium hirsutum HOM05D005292 ORTHO05D006473 6.2e-135 484.6 408 65.9
Gorai.008G239300 Gossypium raimondii HOM05D005292 ORTHO05D006473 9.0e-134 480.7 433 63.3
Gorai.007G021400 Gossypium raimondii HOM05D005292 ORTHO05D006473 2.0e-133 479.6 410 65.9
Gorai.003G166300 Gossypium raimondii HOM05D005292 ORTHO05D006473 2.1e-130 469.5 408 64.0
Gohir.A11G020400 Gossypium hirsutum HOM05D005292 ORTHO05D006473 1.3e-129 466.8 408 64.5
Gohir.D11G020100 Gossypium hirsutum HOM05D005292 ORTHO05D006473 3.7e-127 458.8 408 63.5
Cpa.g.sc29.95 Carica papaya HOM05D005292 ORTHO05D006473 3.7e-119 432.2 396 61.4
MD04G1079900 Malus domestica HOM05D005292 ORTHO05D006473 2.6e-117 426.0 411 58.4
Cfa012803 Carpinus fangiana HOM05D005292 ORTHO05D006473 3.4e-117 425.6 408 60.0
QL12p014915 Quercus lobata HOM05D005292 ORTHO05D006473 1.4e-115 420.2 409 58.4
Ciclev10020454m.g Citrus clementina HOM05D005292 ORTHO05D006473 2.5e-115 419.5 408 58.8
GSVIVG01004916001 Vitis vinifera HOM05D005292 ORTHO05D006473 5.5e-115 418.3 373 62.5
Prupe.5G079200 Prunus persica HOM05D005292 ORTHO05D006473 6.1e-114 414.8 414 57.7
CiPaw.11G147800 Carya illinoinensis HOM05D005292 ORTHO05D006473 3.0e-113 412.5 408 58.3
Potri.001G118000 Populus trichocarpa HOM05D005292 ORTHO05D006473 1.5e-112 410.2 397 60.5
Lj4g0005126 Lotus japonicus HOM05D005292 ORTHO05D006473 3.7e-111 405.6 409 56.7
arahy.Tifrunner.gnm1.ann1.VS5X7Y Arachis hypogaea HOM05D005292 ORTHO05D006473 4.8e-111 405.2 408 56.9
Ca_12278_v3 Cicer arietinum L. HOM05D005292 ORTHO05D006473 4.8e-111 405.2 406 55.9
Atru.chr9.1428 Acer truncatum HOM05D005292 ORTHO05D006473 6.3e-111 404.8 383 60.3
CANSAT80G2034 Cannabis sativa HOM05D005292 ORTHO05D006473 6.3e-111 404.8 409 56.7
Manes.02G033900 Manihot esculenta HOM05D005292 ORTHO05D006473 1.8e-110 403.3 397 60.2
TWI15G0397 Tripterygium wilfordii HOM05D005292 ORTHO05D006473 2.4e-110 402.9 376 60.4
Phvul.003G214500 Phaseolus vulgaris HOM05D005292 ORTHO05D006473 4.1e-110 402.1 408 56.4
Lalb_Chr05g0225431 Lupinus albus HOM05D005292 ORTHO05D006473 1.5e-109 400.2 408 56.6
Glyma.05G052500 Glycine max HOM05D005292 ORTHO05D006473 2.0e-109 399.8 409 56.5
Glyma.17G134700 Glycine max HOM05D005292 ORTHO05D006473 3.4e-109 399.1 409 57.7
TWI15G0139 Tripterygium wilfordii HOM05D005292 ORTHO05D006473 3.4e-109 399.1 409 56.2
arahy.Tifrunner.gnm1.ann1.YRMJ3W Arachis hypogaea HOM05D005292 ORTHO05D006473 1.0e-108 397.5 395 57.7
VMungo1215G1740 Vigna mungo HOM05D005292 ORTHO05D006473 1.3e-108 397.1 408 56.9
Medtr4g102260 Medicago truncatula HOM05D005292 ORTHO05D006473 7.2e-107 391.3 414 55.1
Gohir.A12G220700 Gossypium hirsutum HOM05D005292 ORTHO05D006473 3.6e-106 389.0 324 65.7
Oeu016513.1 Olea europaea HOM05D005292 ORTHO05D006473 7.9e-106 387.9 407 55.8
TPR.G37684 Trifolium pratense HOM05D005292 ORTHO05D006473 7.9e-106 387.9 412 54.9
Nn1g01261 Nelumbo nucifera HOM05D005292 ORTHO05D006473 5.1e-105 385.2 398 54.8
Dinv21573 Davidia involucrata HOM05D005292 ORTHO05D006473 2.0e-104 383.3 411 55.2
Psat4g068120 Pisum sativum HOM05D005292 ORTHO05D006473 1.7e-103 380.2 413 54.2
Potri.003G114900 Populus trichocarpa HOM05D005292 ORTHO05D006473 2.8e-103 379.4 382 57.3
RcHm_v2.0_Chr7g0201621 Rosa chinensis HOM05D005292 ORTHO05D006473 3.1e-102 375.9 413 54.7
Sed0004099 Sechium edule HOM05D005292 ORTHO05D006473 4.1e-102 375.6 347 60.2
Peaxi162Scf00271g00021 Petunia axillaris HOM05D005292 ORTHO05D006473 2.0e-101 373.2 400 53.8
CiPaw.12G105300 Carya illinoinensis HOM05D005292 ORTHO05D006473 3.5e-101 372.5 352 60.2
MSTRG.12063 Avicennia marina HOM05D005292 ORTHO05D006473 7.7e-101 371.3 386 54.9
CSS0004035 Camellia sinensis var. sinensis HOM05D005292 ORTHO05D006473 7.7e-101 371.3 420 52.4
Nitab4.5_0003534g0020 Nicotiana tabacum HOM05D005292 ORTHO05D006473 1.7e-100 370.2 399 53.6
FAN08G1347 Fragaria x ananassa HOM05D005292 ORTHO05D006473 2.2e-100 369.8 408 53.9
CAN.G630.87 Capsicum annuum HOM05D005292 ORTHO05D006473 1.1e-99 367.5 401 53.1
MBI12_g31646_MAGBIO Magnolia biondii HOM05D005292 ORTHO05D006473 1.1e-99 367.5 394 54.8
FAN18G3339 Fragaria x ananassa HOM05D005292 ORTHO05D006473 1.9e-99 366.7 416 53.6
TAR636G1323 Trochodendron aralioides HOM05D005292 ORTHO05D006473 2.5e-99 366.3 344 60.2
FAN04G0899 Fragaria x ananassa HOM05D005292 ORTHO05D006473 3.2e-99 365.9 413 53.3
Hma1.2p1_0367F.1_g137040 Hydrangea macrophylla HOM05D005292 ORTHO05D006473 3.2e-99 365.9 372 57.3
Sopen08g027820 Solanum pennellii HOM05D005292 ORTHO05D006473 3.2e-99 365.9 399 52.9
vmacro14043 Vaccinium macrocarpon HOM05D005292 ORTHO05D006473 9.4e-99 364.4 333 62.2
Dinv39082 Davidia involucrata HOM05D005292 ORTHO05D006473 1.6e-98 363.6 410 52.7
Solyc08g079450.3 Solanum lycopersicum HOM05D005292 ORTHO05D006473 2.1e-98 363.2 399 52.4
FAN13G3324 Fragaria x ananassa HOM05D005292 ORTHO05D006473 8.0e-98 361.3 413 53.0
CsaV3_5G003780 Cucumis sativus L. HOM05D005292 ORTHO05D006473 5.2e-97 358.6 346 58.7
PSO782G2032 Papaver somniferum HOM05D005292 ORTHO05D006473 5.2e-97 358.6 315 61.6
CDE09G1063 Ceratophyllum demersum HOM05D005292 ORTHO05D006473 6.7e-97 358.2 349 55.6
Haze_08610 Corylus avellana HOM05D005292 ORTHO05D006473 6.7e-97 358.2 340 61.2
Lj8A255T56 Lonicera japonica HOM05D005292 ORTHO05D006473 6.7e-97 358.2 353 58.4
SGA_v2.0_scaffold120G32820 Striga asiatica HOM05D005292 ORTHO05D006473 6.7e-97 358.2 427 51.8
THA.LOC104813867 Tarenaya hassleriana HOM05D005292 ORTHO05D006473 1.1e-96 357.5 296 63.2
Cc08_g13210 Coffea canephora HOM05D005292 ORTHO05D006473 1.5e-96 357.1 344 59.3
PGSC0003DMG400003959 Solanum tuberosum HOM05D005292 ORTHO05D006473 2.6e-96 356.3 400 52.8
Actinidia02093 Actinidia chinensis HOM05D005292 ORTHO05D006473 9.7e-96 354.4 411 51.8
FvH4_5g00640 Fragaria vesca HOM05D005292 ORTHO05D006473 2.2e-95 353.2 317 63.7
Sabra01G0090700 Salix brachista HOM05D005292 ORTHO05D006473 4.8e-95 352.1 493 47.3
Eucgr.D01991 Eucalyptus grandis HOM05D005292 ORTHO05D006473 5.3e-94 348.6 341 59.5
PGR031G2306 Punica granatum HOM05D005292 ORTHO05D006473 1.3e-92 344.0 334 58.4
CDE11G0205 Ceratophyllum demersum HOM05D005292 ORTHO05D006473 3.8e-92 342.4 250 70.0
SalBow1G6483 Salvia bowleyana HOM05D005292 ORTHO05D006473 3.8e-92 342.4 369 54.2
Sp6g05330 Schrenkiella parvula HOM05D005292 ORTHO05D006473 5.0e-92 342.0 306 60.1
Sc22g0000600 Simmondsia chinensis HOM05D005292 ORTHO05D006473 5.0e-92 342.0 313 60.1
Aqoxy7G00654 Aquilegia oxysepala HOM05D005292 ORTHO05D006473 1.5e-91 340.5 344 57.6
BcaB01g02654 Brassica carinata HOM05D005292 ORTHO05D006473 1.5e-91 340.5 289 62.6
Hund14648 Selenicereus undatus HOM05D005292 ORTHO05D006473 1.5e-91 340.5 321 60.1
EL10Ac5g12610 Beta vulgaris HOM05D005292 ORTHO05D006473 3.2e-91 339.3 349 54.4
PSO478G4449 Papaver somniferum HOM05D005292 ORTHO05D006473 4.2e-91 339.0 315 59.4
Carub.0006s3135 Capsella rubella HOM05D005292 ORTHO05D006473 1.2e-90 337.4 321 57.9
Nitab4.5_0007591g0040 Nicotiana tabacum HOM05D005292 ORTHO05D006473 1.6e-90 337.0 414 50.0
ECA233G3282 Erigeron canadensis HOM05D005292 ORTHO05D006473 2.1e-90 336.7 407 51.1
Thhalv10028717m.g Eutrema salsugineum HOM05D005292 ORTHO05D006473 1.0e-89 334.3 358 54.5
ClCG01G003660 Citrullus lanatus HOM05D005292 ORTHO05D006473 4.0e-89 332.4 360 54.4
AL6G47090 Arabidopsis lyrata HOM05D005292 ORTHO05D006473 1.5e-88 330.5 329 57.8
Ah.12g058260 Amaranthus hybridus HOM05D005292 ORTHO05D006473 2.6e-88 329.7 234 73.5
HanXRQChr07g0188671 Helianthus annuus HOM05D005292 ORTHO05D006473 2.6e-88 329.7 412 50.5
BcaC01g04601 Brassica carinata HOM05D005292 ORTHO05D006473 3.4e-88 329.3 336 57.1
CARHR254020 Cardamine hirsuta HOM05D005292 ORTHO05D006473 5.7e-88 328.6 327 56.9
AT4G12230 Arabidopsis thaliana HOM05D005292 ORTHO05D006473 7.5e-88 328.2 329 55.9
AUR62010507 Chenopodium quinoa HOM05D005292 ORTHO05D006473 1.7e-87 327.0 332 54.8
ATR0757G031 Amborella trichopoda HOM05D005292 ORTHO05D006473 2.2e-87 326.6 202 78.7
Os10g0169800 Oryza sativa ssp. japonica HOM05D005292 ORTHO05D006473 3.7e-87 325.9 237 70.9
C03p35880 Brassica napus HOM05D005292 ORTHO05D006473 8.3e-87 324.7 337 57.0
BolC3t15896H Brassica oleracea HOM05D005292 ORTHO05D006473 8.3e-87 324.7 337 57.0
Migut.A00832 Erythranthe guttata HOM05D005292 ORTHO05D006473 2.4e-86 323.2 411 49.1
A03p29600 Brassica napus HOM05D005292 ORTHO05D006473 3.1e-86 322.8 336 56.5
HanXRQChr02g0046251 Helianthus annuus HOM05D005292 ORTHO05D006473 5.3e-86 322.0 413 49.2
BraA03t12155Z Brassica rapa HOM05D005292 ORTHO05D006473 7.0e-86 321.6 336 56.2
Aa31LG9G10310 Aethionema arabicum HOM05D005292 ORTHO05D006473 1.2e-85 320.9 295 62.4
Zm00001eb026990 Zea mays HOM05D005292 ORTHO05D006473 2.2e-84 316.6 199 77.4
unitig_744.g24320 Utricularia gibba HOM05D005292 ORTHO05D006473 5.0e-84 315.5 371 50.7
AUR62017394 Chenopodium quinoa HOM05D005292 ORTHO05D006473 2.5e-83 313.2 251 64.9
DCAR_006803 Daucus carota HOM05D005292 ORTHO05D006473 5.5e-83 312.0 348 53.2
Ah.02g116220 Amaranthus hybridus HOM05D005292 ORTHO05D006473 3.6e-82 309.3 266 61.3
HPP92_014608 Vanilla planifolia HOM05D005292 ORTHO05D006473 3.7e-79 299.3 260 61.9
Nn4g26373 Nelumbo nucifera HOM05D005292 ORTHO05D006473 4.8e-79 298.9 364 49.2
Dinv37766 Davidia involucrata HOM05D005292 ORTHO05D006473 1.0e-76 291.2 270 61.5
Oeu022319.3 Olea europaea HOM05D005292 ORTHO05D006473 1.3e-76 290.8 393 47.3
SEGI_16146 Sequoiadendron giganteum HOM05D005292 ORTHO05D006473 1.7e-76 290.4 268 57.8
Lsat_1_v5_gn_6_9841 Lactuca sativa HOM05D005292 ORTHO05D006473 1.9e-75 287.0 265 57.7
SMO223G0031 Selaginella moellendorffii HOM05D005292 ORTHO05D006473 6.3e-71 271.9 191 68.6
Pp3c6_20320 Physcomitrium patens HOM05D005292 ORTHO05D006473 9.2e-70 268.1 199 65.8
Mapoly0066s0051 Marchantia polymorpha HOM05D005292 ORTHO05D006473 5.2e-65 252.3 232 57.3
Rhsim07G0101700 Rhododendron simsii HOM05D005292 ORTHO05D006473 1.1e-62 244.6 450 39.8
Sabra03G0079600 Salix brachista HOM05D005292 ORTHO05D006473 1.7e-60 237.3 219 60.7
AagrBONN_evm.TU.Sc2ySwM_368.248 Anthoceros agrestis HOM05D005292 ORTHO05D006473 5.6e-59 232.3 240 55.4
Actinidia14462 Actinidia chinensis HOM05D005292 ORTHO05D006473 3.1e-57 226.5 333 47.7
MELO3C005579.2 Cucumis melo HOM05D005292 ORTHO05D006473 7.1e-46 188.7 175 61.7
Lsat_1_v5_gn_2_99060 Lactuca sativa HOM05D005292 ORTHO05D006473 2.8e-42 176.8 120 75.0
TAR629G1108 Trochodendron aralioides HOM05D005292 ORTHO05D006473 3.1e-41 173.3 183 52.5
TAR636G3691 Trochodendron aralioides HOM05D005292 ORTHO05D006473 1.3e-34 151.4 127 63.8
Glyma.05G052200 Glycine max HOM05D005292 ORTHO05D006473 2.2e-31 140.6 143 58.7
SEGI_08273 Sequoiadendron giganteum HOM05D005292 ORTHO05D006473 6.0e-29 132.5 84 77.4
MD06G1074800 Malus domestica HOM05D005292 ORTHO05D006473 5.3e-25 119.4 72 83.3
TWI81G0363 Tripterygium wilfordii HOM05D005292 ORTHO05D006473 1.1e-22 111.7 71 77.5
Lsat_1_v5_gn_8_156781 Lactuca sativa HOM05D005292 ORTHO05D006473 1.4e-22 111.3 82 73.2
SEGI_15988 Sequoiadendron giganteum HOM05D005292 ORTHO05D006473 1.4e-22 111.3 65 80.0
Lsat_1_v5_gn_8_99640 Lactuca sativa HOM05D005292 ORTHO05D006473 3.5e-21 106.7 75 72.0
Aa31LG11G5120 Aethionema arabicum HOM05D005292 ORTHO05D006473 5.1e-20 102.8 147 41.5
Lsat_1_v5_gn_8_88300 Lactuca sativa HOM05D005292 ORTHO05D006473 2.5e-19 100.5 155 41.3
MD06G1074900 Malus domestica HOM05D005292 ORTHO05D006473 5.6e-19 99.4 147 39.5
MD06G1074700 Malus domestica HOM05D005292 ORTHO05D248125 1.5e-08 64.7 98 43.9
Peaxi162Scf00102g01237 Petunia axillaris HOM05D000023 ORTHO05D013611 3.8e-07 60.1 46 58.7


User provided reference genes

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