Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib205G0804 Durio zibethinus HOM05D006803 ORTHO05D008552 2.9e-93 345.1 166 100.0
Duzib084G0216 Durio zibethinus HOM05D006803 ORTHO05D008552 5.6e-76 287.7 166 84.9
Thecc.03G190700 Theobroma cacao HOM05D006803 ORTHO05D008552 5.2e-74 281.2 166 84.9
COL.COLO4_07418 Corchorus olitorius HOM05D006803 ORTHO05D008552 2.6e-73 278.9 166 81.9
Gohir.D08G108400 Gossypium hirsutum HOM05D006803 ORTHO05D008552 2.3e-69 265.8 166 80.7
Gorai.004G116000 Gossypium raimondii HOM05D006803 ORTHO05D008552 2.3e-69 265.8 166 80.7
Gohir.A08G097600 Gossypium hirsutum HOM05D006803 ORTHO05D008552 4.7e-67 258.1 166 78.9
Ciclev10006070m.g Citrus clementina HOM05D006803 ORTHO05D008552 7.1e-55 217.6 165 63.6
ClCG05G008590 Citrullus lanatus HOM05D006803 ORTHO05D008552 3.9e-53 211.8 123 80.5
Manes.14G019756 Manihot esculenta HOM05D006803 ORTHO05D008552 6.6e-53 211.1 170 63.5
MD01G1213500 Malus domestica HOM05D006803 ORTHO05D008552 1.5e-52 209.9 167 64.1
MELO3C006968.2 Cucumis melo HOM05D006803 ORTHO05D008552 3.3e-52 208.8 123 78.0
Cpa.g.sc3.33 Carica papaya HOM05D006803 ORTHO05D008552 2.1e-51 206.1 161 66.5
Prupe.2G305500 Prunus persica HOM05D006803 ORTHO05D008552 2.1e-51 206.1 127 76.4
Actinidia34181 Actinidia chinensis HOM05D006803 ORTHO05D008552 2.8e-51 205.7 170 62.9
Potri.012G033700 Populus trichocarpa HOM05D006803 ORTHO05D008552 2.8e-51 205.7 167 61.7
Sed0009140 Sechium edule HOM05D006803 ORTHO05D008552 2.8e-51 205.7 135 71.9
A10p10450 Brassica napus HOM05D006803 ORTHO05D008552 8.1e-51 204.1 169 63.3
BraA10t43128Z Brassica rapa HOM05D006803 ORTHO05D008552 8.1e-51 204.1 170 61.2
QL09p011586 Quercus lobata HOM05D006803 ORTHO05D008552 1.1e-50 203.8 144 69.4
C09p42680 Brassica napus HOM05D006803 ORTHO05D008552 1.4e-50 203.4 119 79.0
BolC9t57144H Brassica oleracea HOM05D006803 ORTHO05D008552 1.4e-50 203.4 119 79.0
RcHm_v2.0_Chr1g0379821 Rosa chinensis HOM05D006803 ORTHO05D008552 1.8e-50 203.0 127 76.4
MD07G1283300 Malus domestica HOM05D006803 ORTHO05D008552 2.4e-50 202.6 130 72.3
Aa31LG3G9190 Aethionema arabicum HOM05D006803 ORTHO05D008552 3.1e-50 202.2 153 64.1
Carub.0008s1314 Capsella rubella HOM05D006803 ORTHO05D008552 3.1e-50 202.2 172 64.0
FAN06G1048 Fragaria x ananassa HOM05D006803 ORTHO05D008552 3.1e-50 202.2 137 73.0
FAN06G4527 Fragaria x ananassa HOM05D006803 ORTHO05D008552 3.1e-50 202.2 137 73.0
AT5G52960 Arabidopsis thaliana HOM05D006803 ORTHO05D008552 5.3e-50 201.4 119 78.2
CiPaw.05G259100 Carya illinoinensis HOM05D006803 ORTHO05D008552 5.3e-50 201.4 164 66.5
Sp6g15120 Schrenkiella parvula HOM05D006803 ORTHO05D008552 5.3e-50 201.4 154 66.2
arahy.Tifrunner.gnm1.ann1.GHK1U8 Arachis hypogaea HOM05D006803 ORTHO05D008552 6.9e-50 201.1 155 65.2
arahy.Tifrunner.gnm1.ann1.V6YLC6 Arachis hypogaea HOM05D006803 ORTHO05D008552 6.9e-50 201.1 155 65.2
EL10Ac3g05364 Beta vulgaris HOM05D006803 ORTHO05D008552 6.9e-50 201.1 157 65.6
Dinv28351 Davidia involucrata HOM05D006803 ORTHO05D008552 6.9e-50 201.1 160 65.0
THA.LOC104825126 Tarenaya hassleriana HOM05D006803 ORTHO05D008552 6.9e-50 201.1 168 61.3
Hma1.2p1_0327F.1_g126650 Hydrangea macrophylla HOM05D006803 ORTHO05D008552 9.0e-50 200.7 174 62.1
AL8G27460 Arabidopsis lyrata HOM05D006803 ORTHO05D008552 1.2e-49 200.3 171 62.6
FvH4_7g30800 Fragaria vesca HOM05D006803 ORTHO05D008552 1.2e-49 200.3 170 65.9
Nn1g01776 Nelumbo nucifera HOM05D006803 ORTHO05D008552 1.5e-49 199.9 161 64.0
FAN01G0710 Fragaria x ananassa HOM05D006803 ORTHO05D008552 2.0e-49 199.5 137 72.3
Thhalv10014833m.g Eutrema salsugineum HOM05D006803 ORTHO05D008552 2.6e-49 199.1 120 79.2
vmacro06587 Vaccinium macrocarpon HOM05D006803 ORTHO05D008552 3.4e-49 198.7 180 58.3
TPR.G36689 Trifolium pratense HOM05D006803 ORTHO05D008552 5.8e-49 198.0 174 60.9
FAN10G2870 Fragaria x ananassa HOM05D006803 ORTHO05D008552 7.6e-49 197.6 137 71.5
Glyma.09G125800 Glycine max HOM05D006803 ORTHO05D008552 7.6e-49 197.6 170 61.8
VMungo0464G0281 Vigna mungo HOM05D006803 ORTHO05D008552 7.6e-49 197.6 165 62.4
FAN03G2299 Fragaria x ananassa HOM05D006803 ORTHO05D008552 9.9e-49 197.2 137 70.8
GSVIVG01028745001 Vitis vinifera HOM05D006803 ORTHO05D008552 1.3e-48 196.8 167 61.7
Hund11694 Selenicereus undatus HOM05D006803 ORTHO05D008552 1.7e-48 196.4 158 64.6
TWI14G0759 Tripterygium wilfordii HOM05D006803 ORTHO05D008552 6.4e-48 194.5 125 76.8
TAR333G0006 Trochodendron aralioides HOM05D006803 ORTHO05D008552 6.4e-48 194.5 170 59.4
Eucgr.K00316 Eucalyptus grandis HOM05D006803 ORTHO05D008552 1.9e-47 193.0 115 80.9
Atru.chr1.293 Acer truncatum HOM05D006803 ORTHO05D008552 3.2e-47 192.2 181 57.5
Peaxi162Scf00904g00457 Petunia axillaris HOM05D006803 ORTHO05D008552 3.2e-47 192.2 134 70.1
Potri.016G123100 Populus trichocarpa HOM05D006803 ORTHO05D008552 4.2e-47 191.8 135 67.4
Migut.F00254 Erythranthe guttata HOM05D006803 ORTHO05D008552 7.1e-47 191.0 136 65.4
Lj3C914T13 Lonicera japonica HOM05D006803 ORTHO05D008552 7.1e-47 191.0 166 61.4
MBI06_g04289_MAGBIO Magnolia biondii HOM05D006803 ORTHO05D008552 7.1e-47 191.0 155 63.2
Aqoxy7G00212 Aquilegia oxysepala HOM05D006803 ORTHO05D008552 9.3e-47 190.7 138 67.4
Ca_19336_v3 Cicer arietinum L. HOM05D006803 ORTHO05D008552 9.3e-47 190.7 173 58.4
CDE04G2534 Ceratophyllum demersum HOM05D006803 ORTHO05D008552 1.2e-46 190.3 166 62.0
Oeu044167.1 Olea europaea HOM05D006803 ORTHO05D008552 1.6e-46 189.9 114 77.2
PSO135G0887 Papaver somniferum HOM05D006803 ORTHO05D008552 2.7e-46 189.1 169 60.4
Sed0024434 Sechium edule HOM05D006803 ORTHO05D008552 2.7e-46 189.1 139 68.3
Sc19g0001080 Simmondsia chinensis HOM05D006803 ORTHO05D008552 3.5e-46 188.7 96 87.5
unitig_37.g11977 Utricularia gibba HOM05D000211 ORTHO05D002285 3.5e-46 188.7 112 78.6
Actinidia08612 Actinidia chinensis HOM05D006803 ORTHO05D008552 4.6e-46 188.3 170 58.2
SalBow4G1856 Salvia bowleyana HOM05D006803 ORTHO05D008552 4.6e-46 188.3 136 67.6
SalBow4G1881 Salvia bowleyana HOM05D006803 ORTHO05D008552 4.6e-46 188.3 136 67.6
Glyma.16G172700 Glycine max HOM05D006803 ORTHO05D008552 6.0e-46 188.0 168 57.1
Phvul.004G101300 Phaseolus vulgaris HOM05D006803 ORTHO05D008552 6.0e-46 188.0 141 65.2
PGR142G1334 Punica granatum HOM05D006803 ORTHO05D008552 6.0e-46 188.0 170 60.0
SGA_v2.0_scaffold44G16771 Striga asiatica HOM05D006803 ORTHO05D008552 7.8e-46 187.6 127 72.4
CANSAT21G0672 Cannabis sativa HOM05D006803 ORTHO05D008552 1.0e-45 187.2 98 84.7
HanXRQChr09g0253111 Helianthus annuus HOM05D006803 ORTHO05D008552 1.3e-45 186.8 132 66.7
Cc02_g02040 Coffea canephora HOM05D006803 ORTHO05D008552 2.3e-45 186.0 96 87.5
PSO384G2893 Papaver somniferum HOM05D006803 ORTHO05D008552 2.3e-45 186.0 137 70.8
DCAR_014527 Daucus carota HOM05D006803 ORTHO05D008552 3.0e-45 185.7 163 57.7
Sabra15G0018100 Salix brachista HOM05D006803 ORTHO05D008552 3.0e-45 185.7 183 53.6
Sabra15G0020600 Salix brachista HOM05D006803 ORTHO05D008552 3.0e-45 185.7 183 53.0
CAN.G108.11 Capsicum annuum HOM05D006803 ORTHO05D008552 6.6e-45 184.5 110 76.4
Psat1g097000 Pisum sativum HOM05D006803 ORTHO05D008552 8.7e-45 184.1 171 57.9
PGSC0003DMG400009065 Solanum tuberosum HOM05D006803 ORTHO05D008552 8.7e-45 184.1 166 59.0
TWI39G0241 Tripterygium wilfordii HOM05D006803 ORTHO05D008552 1.1e-44 183.7 129 71.3
CDE03G0029 Ceratophyllum demersum HOM05D006803 ORTHO05D008552 1.5e-44 183.3 144 65.3
Medtr6g034205 Medicago truncatula HOM05D006803 ORTHO05D008552 1.5e-44 183.3 152 62.5
Solyc03g007540.3 Solanum lycopersicum HOM05D006803 ORTHO05D008552 1.5e-44 183.3 134 66.4
Sopen03g003500 Solanum pennellii HOM05D006803 ORTHO05D008552 1.5e-44 183.3 166 59.0
Lj2g0024519 Lotus japonicus HOM05D006803 ORTHO05D008552 4.3e-44 181.8 167 55.1
Lsat_1_v5_gn_9_57340 Lactuca sativa HOM05D006803 ORTHO05D008552 5.6e-44 181.4 145 60.7
Lalb_Chr01g0009661 Lupinus albus HOM05D006803 ORTHO05D008552 1.3e-43 180.3 178 56.2
CSS0034587 Camellia sinensis var. sinensis HOM05D006803 ORTHO05D008552 1.6e-43 179.9 96 82.3
Mapoly0006s0111 Marchantia polymorpha HOM05D006803 ORTHO05D008552 1.6e-43 179.9 96 82.3
ATR0721G182 Amborella trichopoda HOM05D006803 ORTHO05D008552 2.1e-43 179.5 140 64.3
Rhsim03G0197200 Rhododendron simsii HOM05D006803 ORTHO05D008552 3.1e-42 175.6 98 80.6
ECA232G4170 Erigeron canadensis HOM05D006803 ORTHO05D008552 6.9e-42 174.5 163 56.4
Os05g0569200 Oryza sativa ssp. japonica HOM05D006803 ORTHO05D008552 3.4e-41 172.2 96 81.2
Zm00001eb296320 Zea mays HOM05D006803 ORTHO05D008552 4.5e-41 171.8 116 69.8
SEGI_13941 Sequoiadendron giganteum HOM05D006803 ORTHO05D008552 7.6e-41 171.0 107 77.6
Sabra12G0022800 Salix brachista HOM05D006803 ORTHO05D008552 2.9e-40 169.1 204 46.1
AagrBONN_evm.TU.Sc2ySwM_228.1351 Anthoceros agrestis HOM05D006803 ORTHO05D008552 7.1e-39 164.5 93 79.6
SMO169G0228 Selaginella moellendorffii HOM05D006803 ORTHO05D008552 9.3e-39 164.1 116 65.5
Pp3c4_26620 Physcomitrium patens HOM05D006803 ORTHO05D008552 6.0e-38 161.4 93 77.4
Pp3c26_8430 Physcomitrium patens HOM05D006803 ORTHO05D008552 6.2e-35 151.4 93 74.2
Haze_00093 Corylus avellana HOM05D006803 ORTHO05D008552 1.5e-33 146.7 104 69.2
Nitab4.5_0000472g0050 Nicotiana tabacum HOM05D006803 ORTHO05D008552 2.6e-33 146.0 134 57.5
Nitab4.5_0001331g0090 Nicotiana tabacum HOM05D006803 ORTHO05D008552 6.5e-32 141.4 170 51.2
CARHR265930 Cardamine hirsuta HOM05D006803 ORTHO05D008552 8.4e-32 141.0 141 53.9
CBR_g9073 Chara braunii HOM05D006803 ORTHO05D008552 3.2e-31 139.0 100 64.0
BcaB08g35659 Brassica carinata HOM05D006803 ORTHO05D008552 3.5e-30 135.6 127 55.9
Eucgr.L03342 Eucalyptus grandis HOM05D006803 ORTHO05D008552 1.3e-27 127.1 92 69.6
HPP92_011456 Vanilla planifolia HOM05D006803 ORTHO05D008552 1.0e-24 117.5 65 83.1
Oeu059677.1 Olea europaea HOM05D006803 ORTHO05D008552 5.0e-24 115.2 101 54.5
Oeu008094.1 Olea europaea HOM05D006803 ORTHO05D008552 2.5e-20 102.8 121 47.1
Oeu059693.1 Olea europaea HOM05D006803 ORTHO05D008552 1.3e-19 100.5 121 47.1
Thecc.03G190900 Theobroma cacao HOM05D006803 ORTHO05D008552 7.4e-12 74.7 36 97.2
RcHm_v2.0_Chr1g0379761 Rosa chinensis HOM05D006803 ORTHO05D008552 4.1e-10 68.9 35 85.7


User provided reference genes

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