Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib205G0315 Durio zibethinus HOM05D006632 ORTHO05D008224 3.2e-130 468.4 233 100.0
Gohir.D12G222100 Gossypium hirsutum HOM05D006632 ORTHO05D008224 1.3e-115 419.9 230 91.3
Gorai.008G238100 Gossypium raimondii HOM05D006632 ORTHO05D008224 8.5e-115 417.2 230 90.9
Gohir.A12G219900 Gossypium hirsutum HOM05D006632 ORTHO05D008224 1.0e-112 410.2 230 90.0
Thecc.03G254100 Theobroma cacao HOM05D006632 ORTHO05D008224 9.2e-109 397.1 228 88.2
TWI81G0482 Tripterygium wilfordii HOM05D006632 ORTHO05D008224 1.1e-98 363.6 233 77.7
Atru.chr9.1340 Acer truncatum HOM05D006632 ORTHO05D008224 3.3e-98 362.1 229 78.2
Cfa012746 Carpinus fangiana HOM05D006632 ORTHO05D008224 5.6e-98 361.3 230 78.7
Ciclev10022042m.g Citrus clementina HOM05D006632 ORTHO05D008224 4.7e-97 358.2 232 77.2
Prupe.5G072600 Prunus persica HOM05D006632 ORTHO05D008224 8.0e-97 357.5 232 75.9
GSVIVG01001305001 Vitis vinifera HOM05D006632 ORTHO05D008224 1.0e-96 357.1 228 76.8
Haze_07882 Corylus avellana HOM05D006632 ORTHO05D008224 3.1e-96 355.5 227 78.9
CiPaw.11G152400 Carya illinoinensis HOM05D006632 ORTHO05D008224 6.8e-96 354.4 229 75.1
Potri.003G111100 Populus trichocarpa HOM05D006632 ORTHO05D008224 6.8e-96 354.4 230 76.5
CANSAT21G1011 Cannabis sativa HOM05D006632 ORTHO05D008224 8.9e-96 354.0 231 76.6
PGSC0003DMG400012506 Solanum tuberosum HOM05D006632 ORTHO05D008224 2.0e-95 352.8 227 75.8
Potri.008G135980 Populus trichocarpa HOM05D006632 ORTHO05D008224 7.5e-95 350.9 230 76.5
Solyc08g007410.4 Solanum lycopersicum HOM05D006632 ORTHO05D008224 1.7e-94 349.7 227 75.3
Sopen08g003360 Solanum pennellii HOM05D006632 ORTHO05D008224 2.9e-94 349.0 227 75.3
CARHR222910 Cardamine hirsuta HOM05D006632 ORTHO05D008224 3.7e-94 348.6 229 74.2
Rhsim07G0107100 Rhododendron simsii HOM05D006632 ORTHO05D008224 3.7e-94 348.6 231 77.1
Nn6g34002 Nelumbo nucifera HOM05D006632 ORTHO05D008224 8.3e-94 347.4 226 76.1
Glyma.05G058200 Glycine max HOM05D006632 ORTHO05D008224 1.1e-93 347.1 229 75.5
Sed0019633 Sechium edule HOM05D006632 ORTHO05D008224 1.9e-93 346.3 226 74.3
VMungo0251G2371 Vigna mungo HOM05D006632 ORTHO05D008224 1.9e-93 346.3 229 74.7
Nitab4.5_0001707g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 2.4e-93 345.9 238 72.3
AL7G38450 Arabidopsis lyrata HOM05D006632 ORTHO05D008224 4.1e-93 345.1 230 74.8
RcHm_v2.0_Chr7g0202881 Rosa chinensis HOM05D006632 ORTHO05D008224 5.4e-93 344.7 234 73.9
Hma1.2p1_0916F.1_g236520 Hydrangea macrophylla HOM05D006632 ORTHO05D008224 9.2e-93 344.0 231 75.3
Cc08_g12700 Coffea canephora HOM05D006632 ORTHO05D008224 1.2e-92 343.6 229 74.2
MELO3C013948.2 Cucumis melo HOM05D006632 ORTHO05D008224 2.0e-92 342.8 226 75.2
Lsat_1_v5_gn_6_91561 Lactuca sativa HOM05D006632 ORTHO05D008224 2.0e-92 342.8 226 73.9
Oeu062975.1 Olea europaea HOM05D006632 ORTHO05D008224 2.0e-92 342.8 229 74.7
Aa31LG2G12620 Aethionema arabicum HOM05D006632 ORTHO05D008224 3.5e-92 342.0 231 73.6
Manes.01G079200 Manihot esculenta HOM05D006632 ORTHO05D008224 3.5e-92 342.0 237 73.8
Psat4g070160 Pisum sativum HOM05D006632 ORTHO05D008224 6.0e-92 341.3 231 73.6
Actinidia05199 Actinidia chinensis HOM05D006632 ORTHO05D008224 1.0e-91 340.5 233 73.4
Phvul.003G219500 Phaseolus vulgaris HOM05D006632 ORTHO05D008224 1.7e-91 339.7 232 72.8
ClCG10G002780 Citrullus lanatus HOM05D006632 ORTHO05D008224 2.3e-91 339.3 226 74.8
Nitab4.5_0004059g0060 Nicotiana tabacum HOM05D006632 ORTHO05D008224 3.9e-91 338.6 233 72.5
Lalb_Chr05g0225741 Lupinus albus HOM05D006632 ORTHO05D008224 8.6e-91 337.4 229 74.7
Carub.0007s2499 Capsella rubella HOM05D006632 ORTHO05D008224 1.1e-90 337.0 230 72.2
Medtr4g101100 Medicago truncatula HOM05D006632 ORTHO05D008224 1.1e-90 337.0 234 73.5
AT4G16510 Arabidopsis thaliana HOM05D006632 ORTHO05D008224 1.9e-90 336.3 230 72.6
Nitab4.5_0000312g0210 Nicotiana tabacum HOM05D006632 ORTHO05D008224 3.3e-90 335.5 228 73.2
FAN18G2132 Fragaria x ananassa HOM05D006632 ORTHO05D008224 5.6e-90 334.7 232 74.1
TPR.G37669 Trifolium pratense HOM05D006632 ORTHO05D008224 5.6e-90 334.7 230 73.9
arahy.Tifrunner.gnm1.ann1.E5X9TE Arachis hypogaea HOM05D006632 ORTHO05D008224 1.2e-89 333.6 227 72.7
Lj4g0001078 Lotus japonicus HOM05D006632 ORTHO05D008224 1.2e-89 333.6 231 71.9
Sabra03G0077000 Salix brachista HOM05D006632 ORTHO05D008224 2.8e-89 332.4 271 63.8
CSS0044555 Camellia sinensis var. sinensis HOM05D006632 ORTHO05D008224 3.6e-89 332.0 235 72.3
Sp7g15070 Schrenkiella parvula HOM05D006632 ORTHO05D008224 3.6e-89 332.0 228 71.5
Migut.A00961 Erythranthe guttata HOM05D006632 ORTHO05D008224 6.2e-89 331.3 236 71.6
A08p12540 Brassica napus HOM05D006632 ORTHO05D008224 8.1e-89 330.9 227 71.4
BraA08t33245Z Brassica rapa HOM05D006632 ORTHO05D008224 8.1e-89 330.9 227 71.4
arahy.Tifrunner.gnm1.ann1.UQJ0AM Arachis hypogaea HOM05D006632 ORTHO05D008224 1.1e-88 330.5 227 72.2
MSTRG.25531 Avicennia marina HOM05D006632 ORTHO05D008224 1.8e-88 329.7 226 71.7
Lj2A215T22 Lonicera japonica HOM05D006632 ORTHO05D008224 1.8e-88 329.7 226 71.2
PSO063G6697 Papaver somniferum HOM05D006632 ORTHO05D008224 2.3e-88 329.3 235 69.8
BolC8t48376H Brassica oleracea HOM05D006632 ORTHO05D008224 3.1e-88 328.9 227 71.8
DCAR_027784 Daucus carota HOM05D006632 ORTHO05D008224 4.0e-88 328.6 231 71.9
Thhalv10026162m.g Eutrema salsugineum HOM05D006632 ORTHO05D008224 5.2e-88 328.2 228 71.5
PSO782G3692 Papaver somniferum HOM05D006632 ORTHO05D008224 5.2e-88 328.2 235 68.9
vmacro14091 Vaccinium macrocarpon HOM05D006632 ORTHO05D008224 8.9e-88 327.4 275 64.0
FAN08G0873 Fragaria x ananassa HOM05D006632 ORTHO05D008224 1.5e-87 326.6 243 70.4
THA.LOC104814709 Tarenaya hassleriana HOM05D006632 ORTHO05D008224 1.5e-87 326.6 229 72.5
FAN04G0341 Fragaria x ananassa HOM05D006632 ORTHO05D008224 2.0e-87 326.2 243 71.2
Rhsim07G0106500 Rhododendron simsii HOM05D006632 ORTHO05D008224 4.4e-87 325.1 298 60.4
FAN13G0450 Fragaria x ananassa HOM05D006632 ORTHO05D008224 3.7e-86 322.0 260 66.5
ECA240G2825 Erigeron canadensis HOM05D006632 ORTHO05D008224 8.3e-86 320.9 231 69.3
CsaV3_3G002820 Cucumis sativus L. HOM05D006632 ORTHO05D008224 1.4e-85 320.1 208 73.6
CAN.G1227.10 Capsicum annuum HOM05D006632 ORTHO05D008224 4.1e-85 318.5 175 84.6
Ah.12g056690 Amaranthus hybridus HOM05D006632 ORTHO05D008224 1.2e-84 317.0 226 69.9
PGR042G2887 Punica granatum HOM05D006632 ORTHO05D008224 2.1e-84 316.2 231 69.3
HanXRQChr03g0088651 Helianthus annuus HOM05D006632 ORTHO05D008224 2.7e-84 315.8 222 72.1
AUR62039953 Chenopodium quinoa HOM05D006632 ORTHO05D008224 3.5e-84 315.5 222 72.1
MD06G1061300 Malus domestica HOM05D006632 ORTHO05D008224 6.0e-84 314.7 231 68.0
CDE02G1947 Ceratophyllum demersum HOM05D006632 ORTHO05D008224 1.1e-82 310.5 222 70.3
EL10Ac5g13049 Beta vulgaris HOM05D006632 ORTHO05D008224 1.9e-82 309.7 226 69.5
Aqoxy5G03914 Aquilegia oxysepala HOM05D006632 ORTHO05D008224 3.3e-82 308.9 225 68.9
Eucgr.E00435 Eucalyptus grandis HOM05D006632 ORTHO05D008224 1.2e-81 307.0 240 66.2
AUR62007500 Chenopodium quinoa HOM05D006632 ORTHO05D008224 2.1e-81 306.2 223 70.9
HPP92_014478 Vanilla planifolia HOM05D006632 ORTHO05D008224 2.8e-81 305.8 229 67.2
SGA_v2.0_scaffold120G32870 Striga asiatica HOM05D006632 ORTHO05D008224 8.9e-80 300.8 289 57.4
BcaC07g37993 Brassica carinata HOM05D006632 ORTHO05D008224 1.0e-75 287.3 201 72.1
unitig_27.g25096 Utricularia gibba HOM05D006632 ORTHO05D008224 1.3e-75 287.0 201 69.7
SEGI_31519 Sequoiadendron giganteum HOM05D006632 ORTHO05D008224 1.9e-74 283.1 233 61.8
Dinv21617 Davidia involucrata HOM05D006632 ORTHO05D008224 2.5e-74 282.7 227 66.5
Os02g0662200 Oryza sativa ssp. japonica HOM05D006632 ORTHO05D008224 4.3e-74 282.0 230 60.0
Sc01g0008570 Simmondsia chinensis HOM05D006632 ORTHO05D008224 2.1e-73 279.6 160 83.8
Peaxi162Scf00102g01151 Petunia axillaris HOM05D006632 ORTHO05D008224 8.1e-73 277.7 231 62.8
MD00G1115100 Malus domestica HOM05D006632 ORTHO05D008224 6.9e-72 274.6 245 61.2
Zm00001eb249830 Zea mays HOM05D006632 ORTHO05D008224 2.9e-70 269.2 231 59.7
QL12p012693 Quercus lobata HOM05D006632 ORTHO05D008224 1.1e-69 267.3 188 72.9
SMO143G0241 Selaginella moellendorffii HOM05D006632 ORTHO05D008224 5.4e-69 265.0 184 67.4
Mapoly0121s0036 Marchantia polymorpha HOM05D006632 ORTHO05D008224 1.2e-68 263.8 183 69.4
Pp3c24_4050 Physcomitrium patens HOM05D006632 ORTHO05D008224 1.3e-67 260.4 199 63.3
Hund14588 Selenicereus undatus HOM05D006632 ORTHO05D008224 7.3e-66 254.6 382 43.2
Nitab4.5_0017825g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 1.4e-64 250.4 188 67.6
DCAR_004945 Daucus carota HOM05D006632 ORTHO05D008224 2.4e-61 239.6 228 57.9
CBR_g26463 Chara braunii HOM05D006632 ORTHO05D008224 3.9e-59 232.3 183 60.7
SalBow6G7145 Salvia bowleyana HOM05D006632 ORTHO05D008224 3.3e-50 202.6 155 69.0
Ca_22220_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 1.6e-49 200.3 183 62.3
Ca_21955_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 2.4e-48 196.4 155 69.7
Cre07.g338250 Chlamydomonas reinhardtii HOM05D006632 ORTHO05D008224 7.6e-47 191.4 168 52.4
ATR0564G418 Amborella trichopoda HOM05D006632 ORTHO05D008224 3.7e-41 172.6 164 56.7
C01p26240 Brassica napus HOM05D006632 ORTHO05D008224 2.4e-40 169.9 133 66.2
BolC1t02568H Brassica oleracea HOM05D006632 ORTHO05D008224 2.4e-40 169.9 133 66.2
MCO15G182 Micromonas commoda HOM05D006632 ORTHO05D008224 6.1e-36 155.2 163 47.9
PRCOL_00001140 Prasinoderma coloniale HOM05D006632 ORTHO05D008224 8.7e-35 151.4 209 39.7
Dinv39125 Davidia involucrata HOM05D006632 ORTHO05D008224 1.4e-32 144.1 136 59.6
BraA01t02010Z Brassica rapa HOM05D006632 ORTHO05D008224 1.0e-30 137.9 149 53.7
A01p20910 Brassica napus HOM05D006632 ORTHO05D008224 8.5e-30 134.8 149 53.0
Cpa.g.sc276.6 Carica papaya HOM05D006632 ORTHO05D008224 1.4e-27 127.5 108 66.7
AagrBONN_evm.TU.Sc2ySwM_117.1014 Anthoceros agrestis HOM05D006632 ORTHO05D008224 2.0e-23 113.6 140 44.3
Peaxi162Scf00002g00156 Petunia axillaris HOM05D006632 ORTHO05D008224 7.7e-23 111.7 81 66.7
Duzib068G0053 Durio zibethinus HOM05D006632 ORTHO05D008224 1.1e-21 107.8 54 90.7
FvH4_5g00080 Fragaria vesca HOM05D011292 ORTHO05D013599 5.5e-21 105.5 103 59.2
TAR636G0287 Trochodendron aralioides HOM05D006632 ORTHO05D008224 2.2e-17 93.6 101 54.5
DCAR_004944 Daucus carota HOM05D006632 ORTHO05D008224 2.4e-16 90.1 100 55.0
Potri.001G122501 Populus trichocarpa HOM05D006632 ORTHO05D008224 2.1e-12 77.0 53 64.2
Sabra01G0094400 Salix brachista HOM05D006632 ORTHO05D008224 4.7e-12 75.9 46 73.9


User provided reference genes

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