Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib205G0301 Durio zibethinus HOM05D004519 ORTHO05D006283 6.5e-293 1010.0 509 100.0
Gorai.004G182200 Gossypium raimondii HOM05D004519 ORTHO05D006283 9.3e-207 723.8 454 81.7
Gorai.007G033500 Gossypium raimondii HOM05D004519 ORTHO05D006283 2.5e-191 672.5 459 76.9
Gohir.A03G000032 Gossypium hirsutum HOM05D004519 ORTHO05D006283 2.1e-190 669.5 461 77.0
Thecc.03G310400 Theobroma cacao HOM05D004519 ORTHO05D006283 4.7e-190 668.3 458 77.1
Gorai.003G185500 Gossypium raimondii HOM05D004519 ORTHO05D006283 8.2e-187 657.5 461 75.7
Gohir.A11G028600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 7.2e-183 644.4 393 81.7
Duzib068G1409 Durio zibethinus HOM05D004519 ORTHO05D006283 6.7e-181 637.9 455 75.2
Gohir.D11G030600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 2.6e-180 636.0 393 80.7
Gohir.D08G174500 Gossypium hirsutum HOM05D004519 ORTHO05D006283 2.7e-174 615.9 395 79.5
Gohir.A08G153600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 4.0e-173 612.1 395 79.2
Ciclev10001047m.g Citrus clementina HOM05D004519 ORTHO05D006283 3.7e-171 605.5 462 66.9
RcHm_v2.0_Chr7g0211781 Rosa chinensis HOM05D004519 ORTHO05D006283 1.6e-169 600.1 410 70.2
GSVIVG01013060001 Vitis vinifera HOM05D004519 ORTHO05D006283 2.0e-169 599.7 443 69.3
Nn3g19385 Nelumbo nucifera HOM05D004519 ORTHO05D006283 2.9e-168 595.9 459 66.0
Dinv29004 Davidia involucrata HOM05D004519 ORTHO05D006283 8.5e-168 594.3 407 73.2
PGR042G1943 Punica granatum HOM05D004519 ORTHO05D006283 1.5e-167 593.6 436 67.2
FvH4_5g23060 Fragaria vesca HOM05D004519 ORTHO05D006283 9.4e-167 590.9 411 69.8
FAN18G3814 Fragaria x ananassa HOM05D004519 ORTHO05D006283 9.4e-167 590.9 411 69.8
FAN04G1490 Fragaria x ananassa HOM05D004519 ORTHO05D006283 2.1e-166 589.7 411 69.6
Cfa012505 Carpinus fangiana HOM05D004519 ORTHO05D006283 8.0e-166 587.8 398 72.1
Nn1g00218 Nelumbo nucifera HOM05D004519 ORTHO05D006283 1.4e-165 587.0 403 70.7
CSS0024637 Camellia sinensis var. sinensis HOM05D004519 ORTHO05D006283 3.0e-165 585.9 454 66.5
FAN18G1908 Fragaria x ananassa HOM05D004519 ORTHO05D006283 4.8e-163 578.6 457 64.1
MD06G1026700 Malus domestica HOM05D004519 ORTHO05D006283 1.1e-162 577.4 451 65.9
Potri.001G136600 Populus trichocarpa HOM05D004519 ORTHO05D006283 5.4e-162 575.1 445 67.4
FAN13G3061 Fragaria x ananassa HOM05D004519 ORTHO05D006283 9.1e-162 574.3 401 69.6
MELO3C003440.2 Cucumis melo HOM05D004519 ORTHO05D006283 2.0e-161 573.2 388 72.7
CsaV3_3G048840 Cucumis sativus L. HOM05D004519 ORTHO05D006283 2.7e-161 572.8 391 72.1
MD16G1279400 Malus domestica HOM05D004519 ORTHO05D006283 2.7e-161 572.8 451 66.3
Manes.17G018849 Manihot esculenta HOM05D004519 ORTHO05D006283 3.5e-161 572.4 456 65.8
CiPaw.11G098500 Carya illinoinensis HOM05D004519 ORTHO05D006283 7.7e-161 571.2 453 65.6
TAR629G2035 Trochodendron aralioides HOM05D004519 ORTHO05D006283 1.0e-160 570.9 482 62.2
Eucgr.E00228 Eucalyptus grandis HOM05D004519 ORTHO05D006283 5.0e-160 568.5 394 70.1
CiPaw.12G068400 Carya illinoinensis HOM05D004519 ORTHO05D006283 3.3e-159 565.8 388 72.2
Sc01g0007150 Simmondsia chinensis HOM05D004519 ORTHO05D006283 5.5e-159 565.1 429 67.1
Oeu027094.2 Olea europaea HOM05D004519 ORTHO05D006283 1.6e-158 563.5 449 65.5
THA.LOC104812759 Tarenaya hassleriana HOM05D004519 ORTHO05D006283 2.1e-158 563.1 421 68.6
Dinv25262 Davidia involucrata HOM05D004519 ORTHO05D006283 4.7e-158 562.0 386 71.5
HanXRQChr03g0083251 Helianthus annuus HOM05D004519 ORTHO05D006283 3.0e-157 559.3 444 65.1
THA.LOC104814413 Tarenaya hassleriana HOM05D004519 ORTHO05D006283 4.4e-156 555.4 461 62.9
PSO063G4347 Papaver somniferum HOM05D004519 ORTHO05D006283 6.3e-155 551.6 461 62.3
Aqoxy3G02176 Aquilegia oxysepala HOM05D004519 ORTHO05D006283 1.8e-154 550.1 443 62.3
PSO782G3212 Papaver somniferum HOM05D004519 ORTHO05D006283 2.4e-154 549.7 461 62.0
CANSAT01G0127 Cannabis sativa HOM05D004519 ORTHO05D006283 3.1e-154 549.3 350 75.7
Hma1.2p1_1569F.1_g291200 Hydrangea macrophylla HOM05D004519 ORTHO05D006283 9.2e-154 547.7 445 62.5
AT1G32200 Arabidopsis thaliana HOM05D004519 ORTHO05D006283 1.6e-153 547.0 397 66.2
Lj4g0001331 Lotus japonicus HOM05D004519 ORTHO05D006283 2.7e-153 546.2 360 71.9
MBI04_g32203_MAGBIO Magnolia biondii HOM05D004519 ORTHO05D006283 4.5e-153 545.4 463 60.5
A09p34000 Brassica napus HOM05D004519 ORTHO05D006283 5.9e-153 545.0 396 66.2
Gohir.D03G176300 Gossypium hirsutum HOM05D004519 ORTHO05D006283 5.9e-153 545.0 329 80.9
A05p25130 Brassica napus HOM05D004519 ORTHO05D006283 7.8e-153 544.7 423 64.1
BraA05t21393Z Brassica rapa HOM05D004519 ORTHO05D006283 7.8e-153 544.7 423 64.1
ClCG09G011630 Citrullus lanatus HOM05D004519 ORTHO05D006283 7.8e-153 544.7 469 62.5
Sabra01G0105700 Salix brachista HOM05D004519 ORTHO05D006283 1.3e-152 543.9 458 62.0
Sp1g27880 Schrenkiella parvula HOM05D004519 ORTHO05D006283 1.7e-152 543.5 401 65.6
Thhalv10007540m.g Eutrema salsugineum HOM05D004519 ORTHO05D006283 2.9e-152 542.7 401 65.8
BcaB07g32892 Brassica carinata HOM05D004519 ORTHO05D006283 3.8e-152 542.3 412 65.0
C05p31600 Brassica napus HOM05D004519 ORTHO05D006283 3.8e-152 542.3 390 66.9
BolC5t31883H Brassica oleracea HOM05D004519 ORTHO05D006283 3.8e-152 542.3 390 66.9
BcaC05g27905 Brassica carinata HOM05D004519 ORTHO05D006283 8.6e-152 541.2 443 62.8
HanXRQChr13g0414231 Helianthus annuus HOM05D004519 ORTHO05D006283 1.1e-151 540.8 443 62.5
Aa31LG2G13810 Aethionema arabicum HOM05D004519 ORTHO05D006283 1.9e-151 540.0 461 60.5
BcaB03g13753 Brassica carinata HOM05D004519 ORTHO05D006283 1.9e-151 540.0 399 65.9
Sed0022223 Sechium edule HOM05D004519 ORTHO05D006283 1.9e-151 540.0 390 67.7
AL1G46330 Arabidopsis lyrata HOM05D004519 ORTHO05D006283 2.5e-151 539.7 453 59.8
Cc08_g03490 Coffea canephora HOM05D004519 ORTHO05D006283 2.5e-151 539.7 365 72.9
CAN.G726.25 Capsicum annuum HOM05D004519 ORTHO05D006283 7.3e-151 538.1 454 60.8
BcaC05g27251 Brassica carinata HOM05D004519 ORTHO05D006283 1.2e-150 537.3 390 66.7
ECA240G3299 Erigeron canadensis HOM05D004519 ORTHO05D006283 2.8e-150 536.2 439 61.0
Lsat_1_v5_gn_6_80100 Lactuca sativa HOM05D004519 ORTHO05D006283 3.6e-150 535.8 441 62.4
MSTRG.24848 Avicennia marina HOM05D004519 ORTHO05D006283 6.1e-150 535.0 449 62.8
Migut.E00743 Erythranthe guttata HOM05D004519 ORTHO05D006283 6.1e-150 535.0 414 64.7
Glyma.01G014200 Glycine max HOM05D004519 ORTHO05D006283 6.1e-150 535.0 360 71.4
Carub.0001s3053 Capsella rubella HOM05D004519 ORTHO05D006283 8.0e-150 534.6 453 59.4
Lalb_Chr16g0381061 Lupinus albus HOM05D004519 ORTHO05D006283 3.0e-149 532.7 360 70.0
Nitab4.5_0000529g0120 Nicotiana tabacum HOM05D004519 ORTHO05D006283 3.0e-149 532.7 463 61.1
Ca_25177_v3 Cicer arietinum L. HOM05D004519 ORTHO05D006283 5.2e-149 531.9 360 70.6
VMungo1215G0394 Vigna mungo HOM05D004519 ORTHO05D006283 5.2e-149 531.9 360 70.6
Lalb_Chr09g0325481 Lupinus albus HOM05D004519 ORTHO05D006283 6.8e-149 531.6 448 60.3
Glyma.09G207900 Glycine max HOM05D004519 ORTHO05D006283 8.9e-149 531.2 360 70.8
Solyc08g076470.4 Solanum lycopersicum HOM05D004519 ORTHO05D006283 4.4e-148 528.9 426 63.4
Medtr5g029230 Medicago truncatula HOM05D004519 ORTHO05D006283 5.8e-148 528.5 360 69.7
CARHR031570 Cardamine hirsuta HOM05D004519 ORTHO05D006283 2.2e-147 526.6 467 60.0
Sopen08g025050 Solanum pennellii HOM05D004519 ORTHO05D006283 2.9e-147 526.2 426 63.1
Psat2g139000 Pisum sativum HOM05D004519 ORTHO05D006283 4.9e-147 525.4 442 61.1
BcaC07g37628 Brassica carinata HOM05D004519 ORTHO05D006283 1.1e-146 524.2 394 64.0
QL12p001672 Quercus lobata HOM05D004519 ORTHO05D006283 1.1e-146 524.2 533 52.7
SGA_v2.0_scaffold198G41070 Striga asiatica HOM05D004519 ORTHO05D006283 1.1e-146 524.2 469 59.7
CSS0001538 Camellia sinensis var. sinensis HOM05D004519 ORTHO05D006283 1.9e-146 523.5 326 76.7
TPR.G19434 Trifolium pratense HOM05D004519 ORTHO05D006283 5.4e-146 521.9 360 68.1
Phvul.002G136600 Phaseolus vulgaris HOM05D004519 ORTHO05D006283 1.2e-145 520.8 360 69.2
A08p09320 Brassica napus HOM05D004519 ORTHO05D006283 4.6e-145 518.8 394 63.5
BraA08t32930Z Brassica rapa HOM05D004519 ORTHO05D006283 4.6e-145 518.8 394 63.5
BcaB04g17996 Brassica carinata HOM05D004519 ORTHO05D006283 1.7e-144 516.9 443 58.2
BolC8t47999H Brassica oleracea HOM05D004519 ORTHO05D006283 1.7e-144 516.9 448 58.5
ATR0829G164 Amborella trichopoda HOM05D004519 ORTHO05D006283 5.0e-144 515.4 465 57.8
Prupe.5G027200 Prunus persica HOM05D004519 ORTHO05D006283 8.6e-144 514.6 409 63.6
Zm00001eb224960 Zea mays HOM05D004519 ORTHO05D006283 2.1e-142 510.0 399 62.4
Os10g0577900 Oryza sativa ssp. japonica HOM05D004519 ORTHO05D006283 6.8e-141 505.0 376 63.0
C05p39140 Brassica napus HOM05D004519 ORTHO05D006283 4.4e-140 502.3 413 62.7
SEGI_02196 Sequoiadendron giganteum HOM05D004519 ORTHO05D006283 2.2e-139 500.0 413 60.3
Zm00001eb025080 Zea mays HOM05D004519 ORTHO05D006283 2.9e-139 499.6 391 62.4
BraA09t38946Z Brassica rapa HOM05D004519 ORTHO05D006283 2.4e-138 496.5 396 62.4
CDE12G0245 Ceratophyllum demersum HOM05D004519 ORTHO05D006283 4.1e-138 495.7 384 64.1
AUR62007353 Chenopodium quinoa HOM05D004519 ORTHO05D006283 3.0e-136 489.6 415 59.5
Rhsim11G0021900 Rhododendron simsii HOM05D004519 ORTHO05D006283 3.9e-136 489.2 568 49.6
Lj2A231G41 Lonicera japonica HOM05D004519 ORTHO05D006283 2.5e-135 486.5 458 57.6
arahy.Tifrunner.gnm1.ann1.BI8WMI Arachis hypogaea HOM05D004519 ORTHO05D006283 3.3e-135 486.1 436 59.6
arahy.Tifrunner.gnm1.ann1.D9NVDI Arachis hypogaea HOM05D004519 ORTHO05D006283 3.3e-135 486.1 436 59.6
AUR62018641 Chenopodium quinoa HOM05D004519 ORTHO05D006283 5.6e-135 485.3 350 66.9
vmacro00276 Vaccinium macrocarpon HOM05D004519 ORTHO05D006283 6.2e-134 481.9 317 71.6
unitig_32.g10899 Utricularia gibba HOM05D004519 ORTHO05D006283 2.0e-132 476.9 377 62.9
Haze_08164 Corylus avellana HOM05D004519 ORTHO05D006283 1.4e-130 470.7 418 58.6
DCAR_008221 Daucus carota HOM05D004519 ORTHO05D006283 7.8e-129 464.9 366 63.9
FAN08G3243 Fragaria x ananassa HOM05D004519 ORTHO05D006283 9.5e-127 458.0 414 58.0
Nitab4.5_0012493g0010 Nicotiana tabacum HOM05D004519 ORTHO05D006283 2.8e-126 456.4 298 71.8
CDE04G2515 Ceratophyllum demersum HOM05D004519 ORTHO05D006283 2.2e-123 446.8 388 59.5
HPP92_020895 Vanilla planifolia HOM05D004519 ORTHO05D006283 3.5e-121 439.5 323 68.1
Mapoly0045s0098 Marchantia polymorpha HOM05D004519 ORTHO05D006283 2.3e-120 436.8 455 49.2
EL10Ac5g12013 Beta vulgaris HOM05D004519 ORTHO05D006283 5.6e-119 432.2 378 57.4
Peaxi162Scf00170g00818 Petunia axillaris HOM05D004519 ORTHO05D006283 4.7e-118 429.1 412 56.6
HanXRQChr06g0172791 Helianthus annuus HOM05D004519 ORTHO05D006283 1.1e-117 427.9 363 60.3
Pp3c7_2970 Physcomitrium patens HOM05D004519 ORTHO05D006283 6.9e-117 425.2 381 52.5
SMO244G0022 Selaginella moellendorffii HOM05D004519 ORTHO05D006283 9.9e-116 421.4 349 57.6
Actinidia01317 Actinidia chinensis HOM05D004519 ORTHO05D006283 2.3e-112 410.2 323 66.6
AagrBONN_evm.TU.Sc2ySwM_117.1032 Anthoceros agrestis HOM05D004547 ORTHO05D005133 1.1e-111 407.9 395 52.4
EL10Ac5g12011 Beta vulgaris HOM05D004519 ORTHO05D006283 1.1e-106 391.3 378 53.7
Eucgr.E01634 Eucalyptus grandis HOM05D004519 ORTHO05D006283 9.3e-106 388.3 258 71.3
Cpa.g.sc208.3 Carica papaya HOM05D004519 ORTHO05D006283 1.3e-102 377.9 220 79.1
CBR_g4494 Chara braunii HOM05D004519 ORTHO05D006283 2.1e-102 377.1 421 47.3
DCAR_004271 Daucus carota HOM05D004519 ORTHO05D006283 4.2e-98 362.8 238 71.4
Haze_08160 Corylus avellana HOM05D004519 ORTHO05D006283 1.2e-97 361.3 243 72.0
Atru.chr6.1525 Acer truncatum HOM05D004519 ORTHO05D006283 1.2e-89 334.7 211 75.4
Cre02.g143000 Chlamydomonas reinhardtii HOM05D004519 ORTHO05D006283 3.8e-75 286.6 353 41.1
Actinidia29340 Actinidia chinensis HOM05D004519 ORTHO05D006283 7.0e-69 265.8 293 52.9
MCO03G317 Micromonas commoda HOM05D004519 ORTHO05D006283 9.1e-61 238.8 332 40.1
PRCOL_00006772 Prasinoderma coloniale HOM05D004519 ORTHO05D006283 1.0e-59 235.3 390 36.9
Hma1.2p1_3246F.1_g334370 Hydrangea macrophylla HOM05D004519 ORTHO05D006283 4.4e-47 193.4 176 56.2
Cpa.g.sc208.5 Carica papaya HOM05D004519 ORTHO05D006283 8.9e-40 169.1 217 50.7
MBI15_g25773_MAGBIO Magnolia biondii HOM05D004519 ORTHO05D006283 2.0e-36 157.9 98 74.5
Eucgr.A01818 Eucalyptus grandis HOM05D004519 ORTHO05D006283 3.6e-33 147.1 85 78.8
COL.COLO4_16939 Corchorus olitorius HOM05D004519 ORTHO05D006283 1.3e-27 128.6 72 91.7
HanXRQChr16g0500211 Helianthus annuus HOM05D004519 ORTHO05D006283 2.8e-25 120.9 77 74.0
Gohir.D08G117301 Gossypium hirsutum HOM05D004519 ORTHO05D017048 1.2e-20 105.5 58 86.2
Gohir.D11G228750 Gossypium hirsutum HOM05D004519 ORTHO05D017048 1.2e-20 105.5 58 86.2
Gohir.D11G251850 Gossypium hirsutum HOM05D004519 ORTHO05D017048 1.2e-20 105.5 58 86.2
Gohir.D13G135501 Gossypium hirsutum HOM05D004519 ORTHO05D017048 3.5e-20 104.0 58 84.5
Gorai.008G116000 Gossypium raimondii HOM05D004519 ORTHO05D017048 1.7e-19 101.7 55 87.3
arahy.Tifrunner.gnm1.ann1.LG4SFI Arachis hypogaea HOM05D000755 ORTHO05D017477 5.1e-19 100.1 108 47.2
Haze_20066 Corylus avellana HOM05D004519 ORTHO05D007437 5.1e-19 100.1 95 54.7
PGSC0003DMG401014796 Solanum tuberosum HOM05D004519 ORTHO05D006283 1.5e-15 88.6 93 46.2
Actinidia01316 Actinidia chinensis HOM05D004519 ORTHO05D006283 2.0e-15 88.2 62 66.1
RcHm_v2.0_Chr5g0062811 Rosa chinensis HOM05D004519 ORTHO05D017048 1.9e-13 81.6 54 64.8
Actinidia29341 Actinidia chinensis HOM05D004519 ORTHO05D052920 2.4e-08 64.7 32 84.4
Gohir.D02G161780 Gossypium hirsutum HOM05D004519 ORTHO05D017048 2.4e-08 64.7 36 80.6
Gohir.D10G176966 Gossypium hirsutum HOM05D004519 ORTHO05D017048 2.4e-08 64.7 36 80.6
Gorai.011G197900 Gossypium raimondii HOM05D004519 ORTHO05D017048 7.6e-07 59.7 36 75.0
arahy.Tifrunner.gnm1.ann1.18EICQ Arachis hypogaea HOM05D000755 ORTHO05D017477 8.4e-06 56.2 53 52.8


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