Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib205G0154 Durio zibethinus HOM05D007596 ORTHO05D009672 2.6e-152 542.0 262 100.0
Thecc.03G008700 Theobroma cacao HOM05D007596 ORTHO05D009672 1.4e-142 509.6 262 91.6
Gohir.A09G169500 Gossypium hirsutum HOM05D007596 ORTHO05D009672 2.6e-128 462.2 262 83.2
Gorai.006G187000 Gossypium raimondii HOM05D007596 ORTHO05D009672 4.4e-128 461.5 262 82.8
TWI15G1048 Tripterygium wilfordii HOM05D007596 ORTHO05D009672 1.1e-121 440.3 262 78.2
CiPaw.11G029100 Carya illinoinensis HOM05D007596 ORTHO05D009672 2.6e-120 435.6 260 76.9
COL.COLO4_34057 Corchorus olitorius HOM05D007596 ORTHO05D009672 2.6e-120 435.6 266 80.8
Potri.012G078600 Populus trichocarpa HOM05D007596 ORTHO05D009672 7.9e-117 424.1 263 76.0
CANSAT80G2510 Cannabis sativa HOM05D007596 ORTHO05D009672 1.0e-116 423.7 262 74.4
Manes.06G103100 Manihot esculenta HOM05D007596 ORTHO05D009672 3.9e-116 421.8 263 74.5
Eucgr.K02859 Eucalyptus grandis HOM05D007596 ORTHO05D009672 4.3e-115 418.3 268 75.7
ClCG01G013000 Citrullus lanatus HOM05D007596 ORTHO05D009672 9.0e-113 410.6 262 73.7
Ciclev10021737m.g Citrus clementina HOM05D007596 ORTHO05D009672 1.7e-111 406.4 261 72.8
GSVIVG01007788001 Vitis vinifera HOM05D007596 ORTHO05D009672 1.7e-111 406.4 263 72.6
CsaV3_1G008350 Cucumis sativus L. HOM05D007596 ORTHO05D009672 1.1e-110 403.7 262 72.1
Sed0010804 Sechium edule HOM05D007596 ORTHO05D009672 5.5e-110 401.4 263 71.5
Rhsim12G0163300 Rhododendron simsii HOM05D007596 ORTHO05D009672 1.6e-109 399.8 264 71.2
Gohir.D09G165200 Gossypium hirsutum HOM05D007596 ORTHO05D009672 2.1e-109 399.4 262 74.0
Atru.chr9.2439 Acer truncatum HOM05D007596 ORTHO05D009672 7.9e-109 397.5 260 73.5
Sabra12G0056400 Salix brachista HOM05D007596 ORTHO05D009672 1.0e-108 397.1 305 64.6
Lj4g0018893 Lotus japonicus HOM05D007596 ORTHO05D009672 1.3e-108 396.7 263 70.7
CSS0015692 Camellia sinensis var. sinensis HOM05D007596 ORTHO05D009672 6.7e-108 394.4 264 69.7
Lj9A451T97 Lonicera japonica HOM05D007596 ORTHO05D009672 6.7e-108 394.4 264 70.5
MD06G1177600 Malus domestica HOM05D007596 ORTHO05D009672 6.7e-108 394.4 260 72.3
vmacro16599 Vaccinium macrocarpon HOM05D007596 ORTHO05D009672 6.7e-108 394.4 264 70.8
Lalb_Chr13g0297881 Lupinus albus HOM05D007596 ORTHO05D009672 8.7e-108 394.0 263 70.3
PGR044G0668 Punica granatum HOM05D007596 ORTHO05D009672 8.7e-108 394.0 266 70.7
TAR374G1438 Trochodendron aralioides HOM05D007596 ORTHO05D009672 3.3e-107 392.1 264 70.1
FAN18G0106 Fragaria x ananassa HOM05D007596 ORTHO05D009672 2.4e-105 386.0 262 70.6
FvH4_5g05110 Fragaria vesca HOM05D007596 ORTHO05D009672 3.1e-105 385.6 262 70.2
Hma1.2p1_0701F.1_g205970 Hydrangea macrophylla HOM05D007596 ORTHO05D009672 3.1e-105 385.6 258 71.3
FAN13G0067 Fragaria x ananassa HOM05D007596 ORTHO05D009672 5.3e-105 384.8 262 70.2
PSO063G6591 Papaver somniferum HOM05D007596 ORTHO05D009672 9.0e-105 384.0 264 67.4
FAN08G2413 Fragaria x ananassa HOM05D007596 ORTHO05D009672 1.2e-104 383.6 262 69.8
RcHm_v2.0_Chr7g0193891 Rosa chinensis HOM05D007596 ORTHO05D009672 2.0e-104 382.9 252 73.0
Psat4g056920 Pisum sativum HOM05D007596 ORTHO05D009672 3.4e-104 382.1 265 68.3
EL10Ac5g10784 Beta vulgaris HOM05D007596 ORTHO05D009672 4.5e-104 381.7 261 67.8
Hund02735 Selenicereus undatus HOM05D007596 ORTHO05D009672 1.0e-103 380.6 262 69.1
SGA_v2.0_scaffold90G27960 Striga asiatica HOM05D007596 ORTHO05D009672 1.0e-103 380.6 264 67.0
Nn4g22825 Nelumbo nucifera HOM05D007596 ORTHO05D009672 1.7e-103 379.8 264 68.2
Medtr4g106630 Medicago truncatula HOM05D007596 ORTHO05D009672 1.1e-102 377.1 261 67.0
Phvul.003G198900 Phaseolus vulgaris HOM05D007596 ORTHO05D009672 1.4e-102 376.7 263 68.4
Cc04_g12800 Coffea canephora HOM05D007596 ORTHO05D009672 4.2e-102 375.2 264 65.5
arahy.Tifrunner.gnm1.ann1.8F9XT7 Arachis hypogaea HOM05D007596 ORTHO05D009672 5.5e-102 374.8 263 68.4
Aqoxy3G00967 Aquilegia oxysepala HOM05D007596 ORTHO05D009672 1.6e-101 373.2 262 64.9
arahy.Tifrunner.gnm1.ann1.3E9X4W Arachis hypogaea HOM05D007596 ORTHO05D009672 4.6e-101 371.7 263 68.1
HanXRQChr16g0503661 Helianthus annuus HOM05D007596 ORTHO05D009672 7.9e-101 370.9 262 68.3
MBI15_g31109_MAGBIO Magnolia biondii HOM05D007596 ORTHO05D009672 7.9e-101 370.9 265 65.3
Oeu041561.1 Olea europaea HOM05D007596 ORTHO05D009672 7.9e-101 370.9 264 65.5
DCAR_026124 Daucus carota HOM05D007596 ORTHO05D009672 1.0e-100 370.5 254 65.4
ECA232G2922 Erigeron canadensis HOM05D007596 ORTHO05D009672 1.8e-100 369.8 262 67.9
Glyma.05G036200 Glycine max HOM05D007596 ORTHO05D009672 5.1e-100 368.2 263 65.0
Nitab4.5_0000003g0490 Nicotiana tabacum HOM05D007596 ORTHO05D009672 8.7e-100 367.5 262 64.9
MSTRG.11436 Avicennia marina HOM05D007596 ORTHO05D009672 1.9e-99 366.3 264 65.2
Cfa019092 Carpinus fangiana HOM05D007596 ORTHO05D009672 1.9e-99 366.3 217 77.9
PGSC0003DMG400027097 Solanum tuberosum HOM05D007596 ORTHO05D009672 2.5e-99 365.9 253 67.2
Nitab4.5_0007803g0020 Nicotiana tabacum HOM05D007596 ORTHO05D009672 4.3e-99 365.2 262 64.9
Sopen06g027660 Solanum pennellii HOM05D007596 ORTHO05D009672 7.4e-99 364.4 262 65.6
Migut.I00032 Erythranthe guttata HOM05D007596 ORTHO05D009672 2.8e-98 362.5 252 67.5
FAN18G0038 Fragaria x ananassa HOM05D007596 ORTHO05D009672 3.7e-98 362.1 254 68.5
Solyc06g071380.3 Solanum lycopersicum HOM05D007596 ORTHO05D009672 1.4e-97 360.1 262 64.9
SalBow5G3112 Salvia bowleyana HOM05D007596 ORTHO05D009672 5.3e-97 358.2 263 64.6
Dinv20674 Davidia involucrata HOM05D007596 ORTHO05D009672 1.9e-94 349.7 220 73.2
HPP92_019181 Vanilla planifolia HOM05D007596 ORTHO05D009672 2.7e-93 345.9 265 61.1
TPR.G37562 Trifolium pratense HOM05D007596 ORTHO05D009672 2.3e-92 342.8 264 62.5
Psat4g101560 Pisum sativum HOM05D007596 ORTHO05D009672 2.0e-91 339.7 254 64.6
PSO832G1789 Papaver somniferum HOM05D007596 ORTHO05D009672 6.3e-90 334.7 225 67.6
Lsat_1_v5_gn_4_73100 Lactuca sativa HOM05D007596 ORTHO05D009672 1.5e-83 313.5 262 59.2
Peaxi162Scf00689g00036 Petunia axillaris HOM05D007596 ORTHO05D009672 9.7e-83 310.8 262 57.6
ATR0691G114 Amborella trichopoda HOM05D007596 ORTHO05D009672 5.9e-80 301.6 220 63.2
VMungo1215G2651 Vigna mungo HOM05D007596 ORTHO05D009672 2.5e-78 296.2 263 57.0
Zm00001eb080350 Zea mays HOM05D007596 ORTHO05D009672 6.1e-77 291.6 225 62.7
Os04g0465800 Oryza sativa ssp. japonica HOM05D007596 ORTHO05D009672 2.0e-75 286.6 228 58.8
Prupe.5G176300 Prunus persica HOM05D007596 ORTHO05D009672 2.6e-72 276.2 178 74.7
Sc04g0001910 Simmondsia chinensis HOM05D007596 ORTHO05D009672 2.0e-67 260.0 179 67.0
Ca_21906_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 3.4e-59 232.6 207 56.0
Ca_21924_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 3.4e-59 232.6 207 56.0
CiPaw.11G029000 Carya illinoinensis HOM05D007596 ORTHO05D009672 4.1e-57 225.7 128 78.1
QL10p012241 Quercus lobata HOM05D007596 ORTHO05D009672 5.0e-55 218.8 132 75.8
SMO347G0014 Selaginella moellendorffii HOM05D007596 ORTHO05D009672 2.1e-53 213.4 179 54.7
Glyma.17G091200 Glycine max HOM05D007596 ORTHO05D009672 4.0e-52 209.1 201 52.2
unitig_26.g8797 Utricularia gibba HOM05D007596 ORTHO05D009672 3.7e-50 202.6 282 43.6
Ah.13g077910 Amaranthus hybridus HOM05D007596 ORTHO05D004562 1.7e-47 193.7 228 46.5
SGA_v2.0_scaffold90G27962 Striga asiatica HOM05D007596 ORTHO05D009672 7.3e-46 188.3 161 55.9
Haze_07490 Corylus avellana HOM05D007596 ORTHO05D009672 9.5e-46 188.0 131 69.5
COL.COLO4_33480 Corchorus olitorius HOM05D007596 ORTHO05D009672 1.2e-45 187.6 106 83.0
CBR_g18641 Chara braunii HOM05D007596 ORTHO05D009672 4.9e-42 175.6 143 56.6
AUR62030990 Chenopodium quinoa HOM05D007596 ORTHO05D009672 2.1e-37 160.2 100 74.0
FAN04G0664 Fragaria x ananassa HOM05D007596 ORTHO05D009672 2.9e-34 149.8 118 63.6
FvH4_5g16630 Fragaria vesca HOM05D007596 ORTHO05D009672 2.3e-31 140.2 315 32.1
FAN18G2080 Fragaria x ananassa HOM05D007596 ORTHO05D009672 6.6e-31 138.7 315 32.1
Cpa.g.c40406 Carica papaya HOM05D007596 ORTHO05D009672 8.9e-28 128.3 98 63.3
SGA_v2.0_scaffold90G27974 Striga asiatica HOM05D001155 ORTHO05D001080 1.9e-17 94.0 92 52.2
Sc11g0005570 Simmondsia chinensis HOM05D007596 ORTHO05D009672 7.8e-16 88.6 61 62.3
SGA_v2.0_scaffold90G27967 Striga asiatica HOM05D007596 ORTHO05D009672 7.8e-16 88.6 75 57.3
Sc11g0005890 Simmondsia chinensis HOM05D007596 ORTHO05D009672 5.1e-15 85.9 58 62.1
EL10Ac4g09605 Beta vulgaris HOM05D004918 ORTHO05D005706 4.8e-13 79.3 113 41.6


User provided reference genes

Program Settings