Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib205G0135 Durio zibethinus HOM05D003929 ORTHO05D004499 6.8e-285 983.4 531 100.0
Duzib068G1333 Durio zibethinus HOM05D003929 ORTHO05D004499 3.7e-230 801.6 533 83.7
Thecc.03G012300 Theobroma cacao HOM05D003929 ORTHO05D004499 3.8e-227 791.6 532 82.1
Gohir.A12G274000 Gossypium hirsutum HOM05D003929 ORTHO05D004499 1.4e-205 719.9 533 76.0
Gohir.D12G274700 Gossypium hirsutum HOM05D003929 ORTHO05D004499 4.1e-205 718.4 536 75.6
Gorai.008G295200 Gossypium raimondii HOM05D003929 ORTHO05D004499 1.2e-204 716.8 534 75.7
CiPaw.11G026500 Carya illinoinensis HOM05D003929 ORTHO05D004499 6.2e-177 624.8 532 66.9
Cpa.g.sc770.1 Carica papaya HOM05D003929 ORTHO05D004499 2.3e-176 622.9 523 67.9
Atru.chr9.2475 Acer truncatum HOM05D003929 ORTHO05D004499 6.8e-176 621.3 534 67.6
TWI14G0242 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 5.8e-175 618.2 530 67.5
QL10p011722 Quercus lobata HOM05D003929 ORTHO05D004499 3.5e-172 609.0 540 66.3
Cfa019114 Carpinus fangiana HOM05D003929 ORTHO05D004499 2.0e-167 593.2 557 63.2
Potri.012G080800 Populus trichocarpa HOM05D003929 ORTHO05D004499 7.8e-164 581.3 541 64.3
Dinv20657 Davidia involucrata HOM05D003929 ORTHO05D004499 5.1e-163 578.6 545 64.2
TWI39G0937 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 9.5e-162 574.3 528 64.4
TWI31G0970 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 4.7e-161 572.0 528 64.6
CiPaw.12G026400 Carya illinoinensis HOM05D003929 ORTHO05D004499 8.1e-161 571.2 536 63.4
COL.COLO4_30035 Corchorus olitorius HOM05D003929 ORTHO05D004499 3.1e-160 569.3 536 62.5
Prupe.5G174100 Prunus persica HOM05D003929 ORTHO05D004499 2.4e-157 559.7 532 62.0
RcHm_v2.0_Chr7g0193581 Rosa chinensis HOM05D003929 ORTHO05D004499 2.4e-157 559.7 533 61.7
Manes.14G066000 Manihot esculenta HOM05D003929 ORTHO05D004499 3.2e-157 559.3 538 64.3
Manes.06G104600 Manihot esculenta HOM05D003929 ORTHO05D004499 1.2e-156 557.4 519 64.9
Haze_07467 Corylus avellana HOM05D003929 ORTHO05D004499 1.6e-156 557.0 619 56.5
Dinv02898 Davidia involucrata HOM05D003929 ORTHO05D004499 1.9e-154 550.1 540 62.6
Potri.015G076100 Populus trichocarpa HOM05D003929 ORTHO05D004499 8.1e-153 544.7 533 62.9
GSVIVG01007750001 Vitis vinifera HOM05D003929 ORTHO05D004499 1.5e-151 540.4 534 61.0
FAN04G3176 Fragaria x ananassa HOM05D003929 ORTHO05D004499 2.6e-151 539.7 533 61.5
FAN13G1321 Fragaria x ananassa HOM05D003929 ORTHO05D004499 9.9e-151 537.7 532 61.1
FvH4_5g05290 Fragaria vesca HOM05D003929 ORTHO05D004499 2.2e-150 536.6 533 61.0
FAN18G3765 Fragaria x ananassa HOM05D003929 ORTHO05D004499 1.2e-148 530.8 533 60.4
FAN18G3294 Fragaria x ananassa HOM05D003929 ORTHO05D004499 3.5e-148 529.3 533 59.5
MD14G1180600 Malus domestica HOM05D003929 ORTHO05D004499 1.3e-145 520.8 489 62.2
TAR374G1605 Trochodendron aralioides HOM05D003929 ORTHO05D004499 1.8e-144 516.9 566 58.1
Hma1.2p1_0176F.1_g077430 Hydrangea macrophylla HOM05D003929 ORTHO05D004499 2.6e-143 513.1 532 57.5
CSS0017959 Camellia sinensis var. sinensis HOM05D003929 ORTHO05D004499 4.5e-143 512.3 504 62.7
MD06G1174100 Malus domestica HOM05D003929 ORTHO05D004499 3.8e-142 509.2 495 61.8
Rhsim08G0171800 Rhododendron simsii HOM05D003929 ORTHO05D004499 3.8e-142 509.2 524 59.9
CANSAT80G0843 Cannabis sativa HOM05D003929 ORTHO05D004499 3.2e-141 506.1 543 56.7
Eucgr.B00317 Eucalyptus grandis HOM05D003929 ORTHO05D004499 3.2e-141 506.1 515 58.6
MSTRG.11449 Avicennia marina HOM05D003929 ORTHO05D004499 2.1e-140 503.4 523 58.9
Lalb_Chr13g0297821 Lupinus albus HOM05D003929 ORTHO05D004499 1.0e-139 501.1 529 56.7
Oeu016382.1 Olea europaea HOM05D003929 ORTHO05D004499 3.0e-139 499.6 535 58.3
Nitab4.5_0001017g0080 Nicotiana tabacum HOM05D003929 ORTHO05D004499 5.1e-139 498.8 519 57.6
CAN.G628.79 Capsicum annuum HOM05D003929 ORTHO05D004499 1.5e-138 497.3 530 56.8
SalBow5G2324 Salvia bowleyana HOM05D003929 ORTHO05D004499 1.6e-137 493.8 554 54.3
Solyc06g071470.4 Solanum lycopersicum HOM05D003929 ORTHO05D004499 6.9e-136 488.4 532 56.8
TAR622G0564 Trochodendron aralioides HOM05D003929 ORTHO05D004499 9.0e-136 488.0 563 54.9
FAN08G2589 Fragaria x ananassa HOM05D003929 ORTHO05D004499 2.0e-135 486.9 531 57.4
PGSC0003DMG400027090 Solanum tuberosum HOM05D003929 ORTHO05D004499 4.5e-135 485.7 521 57.4
ClCG06G017000 Citrullus lanatus HOM05D003929 ORTHO05D004499 2.2e-134 483.4 540 57.2
Sopen06g027750 Solanum pennellii HOM05D003929 ORTHO05D004499 1.1e-133 481.1 532 57.0
TPR.G37553 Trifolium pratense HOM05D003929 ORTHO05D004499 7.1e-133 478.4 518 55.4
Phvul.003G200200 Phaseolus vulgaris HOM05D003929 ORTHO05D004499 1.3e-131 474.2 530 55.7
Peaxi162Scf00017g02914 Petunia axillaris HOM05D003929 ORTHO05D004499 1.8e-131 473.8 524 55.5
DCAR_026132 Daucus carota HOM05D003929 ORTHO05D004499 2.5e-130 469.9 535 56.6
Glyma.06G182600 Glycine max HOM05D003929 ORTHO05D004499 3.3e-130 469.5 522 55.0
Lj4g0023186 Lotus japonicus HOM05D003929 ORTHO05D004499 4.3e-130 469.2 536 56.0
ECA232G3264 Erigeron canadensis HOM05D003929 ORTHO05D004499 1.3e-129 467.6 536 56.5
Glyma.17G089700 Glycine max HOM05D003929 ORTHO05D004499 5.3e-128 462.2 533 56.1
Medtr4g106880 Medicago truncatula HOM05D003929 ORTHO05D004499 6.9e-128 461.8 515 56.5
PGR083G1389 Punica granatum HOM05D003929 ORTHO05D004499 4.5e-127 459.1 506 55.3
Sed0022246 Sechium edule HOM05D003929 ORTHO05D004499 4.5e-127 459.1 547 55.2
vmacro19383 Vaccinium macrocarpon HOM05D003929 ORTHO05D004499 1.4e-125 454.1 515 53.6
HanXRQChr16g0504021 Helianthus annuus HOM05D003929 ORTHO05D004499 1.9e-125 453.8 539 56.2
Ciclev10024320m.g Citrus clementina HOM05D003929 ORTHO05D004499 2.7e-124 449.9 419 65.4
CAN.G781.12 Capsicum annuum HOM05D003929 ORTHO05D004499 1.3e-123 447.6 518 53.5
CsaV3_1G001520 Cucumis sativus L. HOM05D003929 ORTHO05D004499 1.3e-123 447.6 539 54.5
THA.LOC104821459 Tarenaya hassleriana HOM05D003929 ORTHO05D004499 3.0e-123 446.4 530 55.7
VMungo1215G1851 Vigna mungo HOM05D003929 ORTHO05D004499 3.0e-123 446.4 537 54.7
Phvul.009G178800 Phaseolus vulgaris HOM05D003929 ORTHO05D004499 3.9e-123 446.0 524 53.1
MELO3C026291.2 Cucumis melo HOM05D003929 ORTHO05D004499 5.1e-123 445.7 541 54.0
Glyma.05G037400 Glycine max HOM05D003929 ORTHO05D004499 8.7e-123 444.9 540 52.8
THA.LOC104818232 Tarenaya hassleriana HOM05D003929 ORTHO05D004499 1.5e-122 444.1 539 54.4
Migut.I00015 Erythranthe guttata HOM05D003929 ORTHO05D004499 5.7e-122 442.2 534 54.1
Aqoxy3G02955 Aquilegia oxysepala HOM05D003929 ORTHO05D004499 4.8e-121 439.1 536 53.9
Cc04_g14000 Coffea canephora HOM05D003929 ORTHO05D004499 6.3e-121 438.7 531 54.6
VMungo1309G0717 Vigna mungo HOM05D003929 ORTHO05D004499 3.1e-120 436.4 516 52.1
Hund09434 Selenicereus undatus HOM05D003929 ORTHO05D004499 4.1e-120 436.0 527 52.6
Nitab4.5_0009783g0030 Nicotiana tabacum HOM05D003929 ORTHO05D004499 1.2e-119 434.5 505 52.9
Ca_21916_v3 Cicer arietinum L. HOM05D003929 ORTHO05D004499 2.6e-119 433.3 509 53.6
Lj5C124G9 Lonicera japonica HOM05D003929 ORTHO05D004499 1.3e-118 431.0 546 53.5
Aa31LG11G880 Aethionema arabicum HOM05D003929 ORTHO05D004499 1.9e-117 427.2 545 50.3
AL8G39770 Arabidopsis lyrata HOM05D003929 ORTHO05D004499 2.5e-117 426.8 531 51.4
Lsat_1_v5_gn_4_75281 Lactuca sativa HOM05D003929 ORTHO05D004499 3.2e-117 426.4 525 52.8
Lalb_Chr11g0071231 Lupinus albus HOM05D003929 ORTHO05D004499 7.2e-117 425.2 533 49.9
Sp2g25960 Schrenkiella parvula HOM05D003929 ORTHO05D004499 4.6e-116 422.5 554 50.0
Carub.0008s2353 Capsella rubella HOM05D003929 ORTHO05D004499 7.9e-116 421.8 535 51.0
arahy.Tifrunner.gnm1.ann1.S02CG0 Arachis hypogaea HOM05D003929 ORTHO05D004499 1.8e-115 420.6 538 48.7
Peaxi162Scf00689g00222 Petunia axillaris HOM05D003929 ORTHO05D004499 1.8e-115 420.6 530 50.8
Nn1g01975 Nelumbo nucifera HOM05D003929 ORTHO05D004499 8.7e-115 418.3 549 51.2
BcaC01g02523 Brassica carinata HOM05D003929 ORTHO05D004499 2.5e-114 416.8 551 50.1
Thhalv10004017m.g Eutrema salsugineum HOM05D003929 ORTHO05D004499 2.5e-114 416.8 548 49.8
C03p63930 Brassica napus HOM05D003929 ORTHO05D004499 5.7e-114 415.6 549 49.7
BcaB02g09694 Brassica carinata HOM05D003929 ORTHO05D004499 7.4e-114 415.2 519 50.7
BolC3t18647H Brassica oleracea HOM05D003929 ORTHO05D004499 1.6e-113 414.1 553 49.9
A06p29570 Brassica napus HOM05D003929 ORTHO05D004499 2.8e-113 413.3 512 50.4
CARHR276590 Cardamine hirsuta HOM05D003929 ORTHO05D004499 2.8e-113 413.3 554 49.8
PSO063G6021 Papaver somniferum HOM05D003929 ORTHO05D004499 2.8e-113 413.3 543 50.8
arahy.Tifrunner.gnm1.ann1.R24CC5 Arachis hypogaea HOM05D003929 ORTHO05D004499 4.8e-113 412.5 543 49.2
PGR044G0511 Punica granatum HOM05D003929 ORTHO05D004499 8.2e-113 411.8 497 53.3
AT5G62810 Arabidopsis thaliana HOM05D003929 ORTHO05D004499 1.1e-112 411.4 556 49.8
BraA06t25903Z Brassica rapa HOM05D003929 ORTHO05D004499 3.1e-112 409.8 522 50.2
A09p07860 Brassica napus HOM05D003929 ORTHO05D004499 9.1e-112 408.3 536 49.3
Actinidia19318 Actinidia chinensis HOM05D003929 ORTHO05D004499 2.0e-111 407.1 388 62.6
BraA09t36437Z Brassica rapa HOM05D003929 ORTHO05D004499 2.0e-111 407.1 528 49.1
Lalb_Chr07g0182721 Lupinus albus HOM05D003929 ORTHO05D004499 2.0e-111 407.1 527 50.7
EL10Ac5g10751 Beta vulgaris HOM05D003929 ORTHO05D004499 3.4e-111 406.4 533 50.3
BolC9t53798H Brassica oleracea HOM05D003929 ORTHO05D004499 1.0e-110 404.8 554 47.8
Lj1g0005514 Lotus japonicus HOM05D003929 ORTHO05D004499 1.0e-110 404.8 520 51.9
Nitab4.5_0007719g0020 Nicotiana tabacum HOM05D003929 ORTHO05D004499 1.7e-110 404.1 526 49.8
BcaC04g23392 Brassica carinata HOM05D003929 ORTHO05D004499 2.2e-110 403.7 554 48.4
C09p08860 Brassica napus HOM05D003929 ORTHO05D004499 2.2e-110 403.7 551 48.5
Hma1.2p1_0000F.1_g000890 Hydrangea macrophylla HOM05D003929 ORTHO05D004499 3.2e-109 399.8 513 52.0
SalBow5G2758 Salvia bowleyana HOM05D003929 ORTHO05D004499 4.2e-109 399.4 556 46.2
arahy.Tifrunner.gnm1.ann1.W2DQVT Arachis hypogaea HOM05D003929 ORTHO05D004499 2.3e-107 393.7 558 49.6
MBI10_g41915_MAGBIO Magnolia biondii HOM05D003929 ORTHO05D004499 5.7e-106 389.0 546 49.1
Actinidia33066 Actinidia chinensis HOM05D003929 ORTHO05D004499 3.8e-102 376.3 445 55.5
PSO832G4520 Papaver somniferum HOM05D003929 ORTHO05D004499 1.6e-100 370.9 563 47.1
Ah.11g051630 Amaranthus hybridus HOM05D003618 ORTHO05D004302 1.5e-98 364.4 541 45.1
SGA_v2.0_scaffold90G27941 Striga asiatica HOM05D003929 ORTHO05D004499 2.0e-98 364.0 553 49.4
Solyc03g114330.3 Solanum lycopersicum HOM05D003929 ORTHO05D004499 3.3e-98 363.2 509 47.5
Psat4g057880 Pisum sativum HOM05D003929 ORTHO05D004499 9.7e-98 361.7 375 56.5
Sed0009068 Sechium edule HOM05D003929 ORTHO05D004499 1.1e-96 358.2 376 59.6
Nitab4.5_0000003g0590 Nicotiana tabacum HOM05D003929 ORTHO05D004499 4.5e-95 352.8 516 44.6
Sc04g0001820 Simmondsia chinensis HOM05D003929 ORTHO05D004499 9.4e-93 345.1 365 58.1
AUR62030967 Chenopodium quinoa HOM05D003929 ORTHO05D004499 3.7e-89 333.2 544 45.8
Sopen03g033430 Solanum pennellii HOM05D003929 ORTHO05D004499 3.2e-85 320.1 507 44.0
HPP92_021833 Vanilla planifolia HOM05D003929 ORTHO05D004499 2.7e-79 300.4 404 49.5
Migut.D01928 Erythranthe guttata HOM05D003929 ORTHO05D004499 1.3e-78 298.1 512 42.4
AUR62008214 Chenopodium quinoa HOM05D003929 ORTHO05D004499 6.5e-78 295.8 528 40.5
CDE05G2632 Ceratophyllum demersum HOM05D003929 ORTHO05D004499 1.9e-77 294.3 498 43.8
ATR0730G040 Amborella trichopoda HOM05D003929 ORTHO05D004499 1.6e-76 291.2 553 39.8
CDE11G0983 Ceratophyllum demersum HOM05D003929 ORTHO05D004499 1.0e-75 288.5 536 41.4
Oeu024692.2 Olea europaea HOM05D003929 ORTHO05D004499 7.8e-71 272.3 304 59.9
Atru.chr11.2035 Acer truncatum HOM05D003929 ORTHO05D004499 1.1e-69 268.5 453 41.1
SEGI_11105 Sequoiadendron giganteum HOM05D003929 ORTHO05D004499 1.2e-68 265.0 551 38.1
Oeu022163.1 Olea europaea HOM05D003929 ORTHO05D004499 8.0e-68 262.3 279 54.1
CSS0023375 Camellia sinensis var. sinensis HOM05D003929 ORTHO05D004499 3.4e-66 256.9 257 66.9
unitig_749.g13474 Utricularia gibba HOM05D003929 ORTHO05D004499 1.0e-59 235.3 415 38.1
Lj9A449T48 Lonicera japonica HOM05D003929 ORTHO05D004499 8.3e-57 225.7 239 55.6
Cfa019127 Carpinus fangiana HOM05D003929 ORTHO05D004499 1.2e-55 221.9 187 62.6
Thecc.02G250700 Theobroma cacao HOM05D003929 ORTHO05D004499 1.6e-55 221.5 416 38.5
Psat4g209200 Pisum sativum HOM05D003929 ORTHO05D004499 2.8e-52 210.7 324 44.4
Hund02741 Selenicereus undatus HOM05D003929 ORTHO05D004499 1.8e-51 208.0 469 38.4
Zm00001eb356320 Zea mays HOM05D003929 ORTHO05D004499 7.5e-50 202.6 436 37.6
COL.COLO4_24172 Corchorus olitorius HOM05D003929 ORTHO05D004499 1.3e-49 201.8 401 37.2
Gohir.A03G139300 Gossypium hirsutum HOM05D003929 ORTHO05D004499 7.1e-48 196.1 404 35.9
Zm00001eb267680 Zea mays HOM05D003929 ORTHO05D004499 1.6e-47 194.9 484 36.2
Gohir.D02G162200 Gossypium hirsutum HOM05D003929 ORTHO05D004499 1.0e-46 192.2 404 35.6
Gorai.005G182200 Gossypium raimondii HOM05D003929 ORTHO05D004499 1.3e-46 191.8 404 35.9
arahy.Tifrunner.gnm1.ann1.49JIZL Arachis hypogaea HOM05D003929 ORTHO05D004499 7.3e-45 186.0 245 51.0
Mapoly0102s0017 Marchantia polymorpha HOM05D003929 ORTHO05D004499 7.1e-40 169.5 482 32.8
Os05g0101200 Oryza sativa ssp. japonica HOM05D003929 ORTHO05D004499 6.6e-38 162.9 531 32.4
FAN24G3310 Fragaria x ananassa HOM05D003929 ORTHO05D004499 1.2e-34 152.1 273 40.7
Os01g0107000 Oryza sativa ssp. japonica HOM05D003929 ORTHO05D004499 3.2e-32 144.1 197 43.1
PSO135G0191 Papaver somniferum HOM05D003929 ORTHO05D004499 6.0e-31 139.8 196 48.0
Zm00001eb126680 Zea mays HOM05D003929 ORTHO05D004499 5.1e-30 136.7 420 32.4
HanXRQChr16g0526511 Helianthus annuus HOM05D004647 ORTHO05D005349 7.3e-29 132.9 195 52.8
Pp3c9_20380 Physcomitrium patens HOM05D003929 ORTHO05D004499 7.3e-29 132.9 237 35.0
PGR044G1312 Punica granatum HOM05D003929 ORTHO05D004499 3.6e-28 130.6 179 44.1
Pp3c15_21860 Physcomitrium patens HOM05D003929 ORTHO05D004499 3.8e-25 120.6 255 33.7
AagrBONN_evm.TU.Sc2ySwM_117.2261 Anthoceros agrestis HOM05D003929 ORTHO05D004499 5.4e-24 116.7 203 40.4
Lj9A449G50 Lonicera japonica HOM05D003929 ORTHO05D004499 3.5e-23 114.0 132 55.3
CBR_g3508 Chara braunii HOM05D003929 ORTHO05D004499 4.6e-23 113.6 338 32.5
Actinidia19319 Actinidia chinensis HOM05D003618 ORTHO05D004302 5.6e-21 106.7 208 48.1
SHI17029 Sapria himalayana HOM05D003929 ORTHO05D004499 1.4e-19 102.1 154 42.9
SHI17030 Sapria himalayana HOM05D003929 ORTHO05D004499 2.4e-19 101.3 93 55.9
PGSC0003DMG400024502 Solanum tuberosum HOM05D003929 ORTHO05D004499 4.0e-19 100.5 108 57.4
Nitab4.5_0000866g0190 Nicotiana tabacum HOM05D003929 ORTHO05D004499 6.4e-17 93.2 121 50.4
ClCG01G013120 Citrullus lanatus HOM05D003929 ORTHO05D004499 1.3e-14 85.5 143 39.2
CBR_g10793 Chara braunii HOM05D027206 ORTHO05D004499 1.5e-10 72.0 83 49.4
Cre10.g454025 Chlamydomonas reinhardtii HOM05D003929 ORTHO05D004499 7.6e-10 69.7 55 63.6
Os05g0578000 Oryza sativa ssp. japonica HOM05D003929 ORTHO05D004499 4.9e-09 67.0 60 55.0
Zm00001eb296750 Zea mays HOM05D003929 ORTHO05D004499 1.2e-07 62.4 76 48.7
CBR_g3506 Chara braunii HOM05D003929 ORTHO05D004499 2.7e-07 61.2 64 46.9
MCO04G191 Micromonas commoda HOM05D003929 ORTHO05D004499 3.0e-06 57.8 409 21.3
SHI17025 Sapria himalayana HOM05D003929 ORTHO05D004499 3.9e-06 57.4 52 55.8


User provided reference genes

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