Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib192G0975 Durio zibethinus HOM05D004441 ORTHO05D003109 3.9e-157 558.1 296 100.0
Duzib160G0195 Durio zibethinus HOM05D004441 ORTHO05D003109 3.7e-123 445.3 298 84.2
Thecc.06G194800 Theobroma cacao HOM05D004441 ORTHO05D003109 4.1e-114 415.2 298 79.9
Gorai.009G171500 Gossypium raimondii HOM05D004441 ORTHO05D003109 7.0e-114 414.5 301 79.7
COL.COLO4_31538 Corchorus olitorius HOM05D004441 ORTHO05D003109 5.0e-112 408.3 306 79.4
Gohir.D05G166400 Gossypium hirsutum HOM05D004441 ORTHO05D003109 7.3e-111 404.4 302 78.8
Gohir.A05G163400 Gossypium hirsutum HOM05D004441 ORTHO05D003109 6.8e-109 397.9 300 77.7
Gohir.A06G124300 Gossypium hirsutum HOM05D004441 ORTHO05D003109 1.2e-97 360.5 298 72.8
Gorai.010G150800 Gossypium raimondii HOM05D004441 ORTHO05D003109 1.0e-96 357.5 298 72.5
Gohir.D06G129200 Gossypium hirsutum HOM05D004441 ORTHO05D003109 1.9e-95 353.2 298 72.1
TWI63G0258 Tripterygium wilfordii HOM05D004441 ORTHO05D003109 5.7e-47 192.2 315 48.9
Potri.011G045700 Populus trichocarpa HOM05D004441 ORTHO05D003109 1.7e-43 180.6 331 45.6
Potri.004G037100 Populus trichocarpa HOM05D004441 ORTHO05D003109 2.0e-39 167.2 336 43.5
Sabra11G0031800 Salix brachista HOM05D004441 ORTHO05D003109 2.0e-39 167.2 334 43.1
Manes.17G041200 Manihot esculenta HOM05D004441 ORTHO05D003109 1.3e-38 164.5 335 43.3
TWI38G0459 Tripterygium wilfordii HOM05D004441 ORTHO05D003109 4.8e-38 162.5 320 44.4
Sabra04G0022600 Salix brachista HOM05D004441 ORTHO05D003109 7.0e-37 158.7 332 44.6
Prupe.4G040000 Prunus persica HOM05D004441 ORTHO05D003109 2.9e-35 153.3 341 41.3
TPR.G36719 Trifolium pratense HOM05D004441 ORTHO05D003109 1.1e-34 151.4 311 42.1
arahy.Tifrunner.gnm1.ann1.KXRU9A Arachis hypogaea HOM05D004441 ORTHO05D003109 4.7e-33 146.0 315 44.4
Medtr2g012750 Medicago truncatula HOM05D004441 ORTHO05D003109 1.8e-32 144.1 311 41.5
Lj6g0023239 Lotus japonicus HOM05D004441 ORTHO05D003109 1.2e-31 141.4 317 41.3
MD10G1300500 Malus domestica HOM05D004441 ORTHO05D003109 1.2e-31 141.4 342 40.1
Ca_00297_v3 Cicer arietinum L. HOM05D004441 ORTHO05D003109 5.7e-31 139.0 320 41.9
ClCG03G005640 Citrullus lanatus HOM05D004441 ORTHO05D003109 5.7e-31 139.0 312 39.4
Phvul.006G189700 Phaseolus vulgaris HOM05D004441 ORTHO05D003109 7.5e-31 138.7 309 42.4
TAR629G3100 Trochodendron aralioides HOM05D004441 ORTHO05D003109 9.7e-31 138.3 327 39.1
Manes.16G023200 Manihot esculenta HOM05D004441 ORTHO05D003109 2.8e-30 136.7 325 40.3
Atru.chr10.1971 Acer truncatum HOM05D004441 ORTHO05D003109 6.3e-30 135.6 308 40.6
FAN25G3261 Fragaria x ananassa HOM05D004441 ORTHO05D003109 1.1e-29 134.8 318 41.2
Cfa000385 Carpinus fangiana HOM05D004441 ORTHO05D003109 1.8e-29 134.0 323 40.6
FAN11G1619 Fragaria x ananassa HOM05D004441 ORTHO05D003109 3.1e-29 133.3 321 40.8
Hma1.2p1_0191F.1_g083410 Hydrangea macrophylla HOM05D004441 ORTHO05D003109 5.3e-29 132.5 312 40.1
Hma1.2p1_2209F.1_g317155 Hydrangea macrophylla HOM05D004441 ORTHO05D003109 5.3e-29 132.5 312 40.1
Psat1g207120 Pisum sativum HOM05D004441 ORTHO05D003109 5.3e-29 132.5 312 41.3
Cpa.g.sc27.93 Carica papaya HOM05D004441 ORTHO05D003109 1.2e-28 131.3 322 41.0
Ciclev10015894m.g Citrus clementina HOM05D004441 ORTHO05D003109 2.0e-28 130.6 344 40.4
FAN16G1227 Fragaria x ananassa HOM05D004441 ORTHO05D003109 2.0e-28 130.6 318 41.2
Glyma.13G244100 Glycine max HOM05D004441 ORTHO05D003109 2.0e-28 130.6 318 42.8
VMungo0540G1643 Vigna mungo HOM05D004441 ORTHO05D003109 1.3e-27 127.9 309 40.1
FvH4_3g04520 Fragaria vesca HOM05D004441 ORTHO05D003109 5.0e-27 125.9 319 40.1
Haze_06542 Corylus avellana HOM05D004441 ORTHO05D003109 1.1e-26 124.8 322 38.8
CsaV3_1G011910 Cucumis sativus L. HOM05D004441 ORTHO05D003109 1.5e-26 124.4 323 37.2
Dinv40519 Davidia involucrata HOM05D004441 ORTHO05D003109 1.5e-26 124.4 316 41.5
CiPaw.09G160900 Carya illinoinensis HOM05D004441 ORTHO05D003109 2.5e-26 123.6 323 39.0
RcHm_v2.0_Chr5g0007441 Rosa chinensis HOM05D004441 ORTHO05D003109 3.6e-25 119.8 341 39.6
Nitab4.5_0001820g0050 Nicotiana tabacum HOM05D004441 ORTHO05D003109 6.1e-25 119.0 318 37.7
arahy.Tifrunner.gnm1.ann1.W0S7NR Arachis hypogaea HOM05D004441 ORTHO05D003109 1.8e-24 117.5 208 48.6
FAN21G2327 Fragaria x ananassa HOM05D004441 ORTHO05D003109 1.8e-24 117.5 313 38.7
Nitab4.5_0007319g0010 Nicotiana tabacum HOM05D004441 ORTHO05D003109 2.3e-24 117.1 316 37.7
SalBow8G3623 Salvia bowleyana HOM05D004441 ORTHO05D003109 5.2e-24 115.9 316 38.9
SalBow8G4382 Salvia bowleyana HOM05D004441 ORTHO05D003109 5.2e-24 115.9 316 38.9
Lalb_Chr15g0089961 Lupinus albus HOM05D004441 ORTHO05D003109 1.5e-23 114.4 313 37.7
Glyma.15G069600 Glycine max HOM05D004441 ORTHO05D003109 5.7e-23 112.5 314 38.5
PGR004G2153 Punica granatum HOM05D004441 ORTHO05D003109 5.7e-23 112.5 345 35.4
Lj1A1210T53 Lonicera japonica HOM05D004441 ORTHO05D003109 9.8e-23 111.7 321 38.3
DCAR_004123 Daucus carota HOM05D004441 ORTHO05D003109 1.1e-21 108.2 312 37.5
Sed0013174 Sechium edule HOM05D004441 ORTHO05D003109 2.4e-21 107.1 276 37.0
Rhsim13G0175700 Rhododendron simsii HOM05D004441 ORTHO05D003109 4.1e-21 106.3 324 37.7
AL2G15180 Arabidopsis lyrata HOM05D004441 ORTHO05D003109 1.6e-20 104.4 272 39.7
PGSC0003DMG400022372 Solanum tuberosum HOM05D004441 ORTHO05D003109 1.6e-20 104.4 268 39.9
BcaC09g49327 Brassica carinata HOM05D004441 ORTHO05D003109 3.5e-20 103.2 307 36.5
C01p37890 Brassica napus HOM05D004441 ORTHO05D003109 3.5e-20 103.2 307 36.5
BolC1t03749H Brassica oleracea HOM05D004441 ORTHO05D003109 3.5e-20 103.2 307 36.5
Solyc02g078760.1 Solanum lycopersicum HOM05D004441 ORTHO05D003109 3.5e-20 103.2 311 36.7
BraA01t03127Z Brassica rapa HOM05D004441 ORTHO05D003109 4.5e-20 102.8 307 36.5
Lsat_1_v5_gn_4_55461 Lactuca sativa HOM05D004441 ORTHO05D003109 7.7e-20 102.1 314 36.6
TAR626G0020 Trochodendron aralioides HOM05D004441 ORTHO05D003109 1.3e-19 101.3 286 36.7
AL1G22120 Arabidopsis lyrata HOM05D004441 ORTHO05D003109 1.7e-19 100.9 212 43.9
THA.LOC104809557 Tarenaya hassleriana HOM05D004441 ORTHO05D003109 1.7e-19 100.9 313 37.7
AT1G61170 Arabidopsis thaliana HOM05D004441 ORTHO05D003109 2.3e-19 100.5 272 39.3
Sp2g03290 Schrenkiella parvula HOM05D004441 ORTHO05D003109 2.3e-19 100.5 309 35.6
PSO675G8062 Papaver somniferum HOM05D004441 ORTHO05D003109 1.5e-18 97.8 349 35.8
Sopen02g023590 Solanum pennellii HOM05D004441 ORTHO05D003109 2.5e-18 97.1 312 36.2
ClCG00G003130 Citrullus lanatus HOM05D004441 ORTHO05D003109 3.2e-18 96.7 308 35.1
ClCG01G022730 Citrullus lanatus HOM05D004441 ORTHO05D003109 3.2e-18 96.7 308 35.1
AT1G11125 Arabidopsis thaliana HOM05D004441 ORTHO05D003109 4.2e-18 96.3 212 43.4
A01p29970 Brassica napus HOM05D004441 ORTHO05D003109 4.2e-18 96.3 307 35.5
Carub.0002s0400 Capsella rubella HOM05D004441 ORTHO05D003109 4.2e-18 96.3 269 38.3
BcaB04g20321 Brassica carinata HOM05D004441 ORTHO05D003109 9.5e-18 95.1 307 38.1
Cc00_g11510 Coffea canephora HOM05D004441 ORTHO05D003109 1.6e-17 94.4 323 36.5
Thhalv10023654m.g Eutrema salsugineum HOM05D004441 ORTHO05D003109 1.6e-17 94.4 243 39.1
Lalb_Chr20g0122111 Lupinus albus HOM05D004441 ORTHO05D003109 2.1e-17 94.0 332 34.6
BcaC02g10584 Brassica carinata HOM05D004441 ORTHO05D003109 2.8e-17 93.6 309 34.0
C04p27200 Brassica napus HOM05D004441 ORTHO05D003109 2.8e-17 93.6 309 34.0
BolC4t24251H Brassica oleracea HOM05D004441 ORTHO05D003109 2.8e-17 93.6 309 34.0
Aqoxy1G02647 Aquilegia oxysepala HOM05D004441 ORTHO05D003109 3.6e-17 93.2 344 33.1
CARHR051480 Cardamine hirsuta HOM05D004441 ORTHO05D003109 6.1e-17 92.4 301 35.9
Dinv39787 Davidia involucrata HOM05D004441 ORTHO05D003109 6.1e-17 92.4 308 37.0
A03p66730 Brassica napus HOM05D004441 ORTHO05D003109 8.0e-17 92.0 307 33.2
BraA01t02809Z Brassica rapa HOM05D004441 ORTHO05D003109 8.0e-17 92.0 307 33.2
Sc17g0006420 Simmondsia chinensis HOM05D004441 ORTHO05D003109 8.0e-17 92.0 338 35.2
Lsat_1_v5_gn_7_20000 Lactuca sativa HOM05D004441 ORTHO05D003109 1.4e-16 91.3 311 35.0
Aa31LG2G9430 Aethionema arabicum HOM05D004441 ORTHO05D003109 1.8e-16 90.9 273 39.9
CsaV3_6G049880 Cucumis sativus L. HOM05D004441 ORTHO05D003109 1.8e-16 90.9 313 35.1
ECA234G2831 Erigeron canadensis HOM05D004441 ORTHO05D003109 2.3e-16 90.5 320 35.3
Actinidia05598 Actinidia chinensis HOM05D004441 ORTHO05D003109 6.8e-16 89.0 248 38.3
A06p07830 Brassica napus HOM05D004441 ORTHO05D003109 6.8e-16 89.0 323 35.3
Hma1.2p1_0835F.1_g225850 Hydrangea macrophylla HOM05D004441 ORTHO05D003109 6.8e-16 89.0 308 35.7
Hma1.2p1_0835F.1_g225855 Hydrangea macrophylla HOM05D004441 ORTHO05D003109 6.8e-16 89.0 308 35.7
BraA06t23983Z Brassica rapa HOM05D004441 ORTHO05D003109 1.2e-15 88.2 325 35.4
Nn1g06687 Nelumbo nucifera HOM05D004441 ORTHO05D003109 1.2e-15 88.2 321 32.7
BcaC06g31839 Brassica carinata HOM05D004441 ORTHO05D003109 2.0e-15 87.4 272 35.3
Thhalv10008484m.g Eutrema salsugineum HOM05D004441 ORTHO05D003109 2.0e-15 87.4 322 34.8
MELO3C007307.2 Cucumis melo HOM05D004441 ORTHO05D003109 2.6e-15 87.0 312 34.0
Cpa.g.sc34.119 Carica papaya HOM05D004441 ORTHO05D003109 3.4e-15 86.7 331 34.1
Oeu026007.1 Olea europaea HOM05D004441 ORTHO05D003109 3.4e-15 86.7 322 34.2
Carub.0001s1070 Capsella rubella HOM05D004441 ORTHO05D003109 4.4e-15 86.3 203 39.4
Ah.09g235850 Amaranthus hybridus HOM05D004441 ORTHO05D003109 7.5e-15 85.5 323 34.4
Phvul.002G224300 Phaseolus vulgaris HOM05D004441 ORTHO05D003109 7.5e-15 85.5 310 34.5
Cfa014564 Carpinus fangiana HOM05D010652 ORTHO05D003109 1.3e-14 84.7 313 33.5
CARHR011330 Cardamine hirsuta HOM05D004441 ORTHO05D003109 1.7e-14 84.3 312 34.3
PSO541G1557 Papaver somniferum HOM05D004441 ORTHO05D003109 2.8e-14 83.6 355 33.0
Haze_13109 Corylus avellana HOM05D010652 ORTHO05D003109 3.7e-14 83.2 312 36.2
TAR627G0319 Trochodendron aralioides HOM05D004441 ORTHO05D003109 3.7e-14 83.2 275 37.1
Lalb_Chr18g0059831 Lupinus albus HOM05D004441 ORTHO05D003109 8.3e-14 82.0 326 34.0
Sed0025630 Sechium edule HOM05D004441 ORTHO05D003109 1.1e-13 81.6 269 34.9
Aqoxy4G01294 Aquilegia oxysepala HOM05D004441 ORTHO05D003109 1.8e-13 80.9 338 34.0
BolC5t29682H Brassica oleracea HOM05D004441 ORTHO05D003109 1.8e-13 80.9 212 40.1
Lj1A733T64 Lonicera japonica HOM05D009304 ORTHO05D003109 1.8e-13 80.9 326 33.4
C05p09410 Brassica napus HOM05D004441 ORTHO05D003109 3.1e-13 80.1 212 39.2
Peaxi162Scf00612g00043 Petunia axillaris HOM05D004441 ORTHO05D003109 3.1e-13 80.1 305 32.8
Migut.M01162 Erythranthe guttata HOM05D004441 ORTHO05D003109 4.1e-13 79.7 318 34.9
Oeu029188.1 Olea europaea HOM05D004441 ORTHO05D003109 7.0e-13 79.0 320 34.4
Sp1g09810 Schrenkiella parvula HOM05D004441 ORTHO05D003109 7.0e-13 79.0 318 33.0
Eucgr.D00694 Eucalyptus grandis HOM05D004441 ORTHO05D003109 9.2e-13 78.6 350 32.9
VMungo0251G2507 Vigna mungo HOM05D004441 ORTHO05D003109 4.5e-12 76.3 303 33.3
CiPaw.03G171700 Carya illinoinensis HOM05D004441 ORTHO05D003109 1.7e-11 74.3 318 32.7
CSS0013822 Camellia sinensis var. sinensis HOM05D009304 ORTHO05D003109 2.3e-11 73.9 315 31.7
Psat7g199680 Pisum sativum HOM05D010177 ORTHO05D003109 3.8e-11 73.2 335 32.5
Actinidia11074 Actinidia chinensis HOM05D002331 ORTHO05D003109 5.0e-11 72.8 264 35.2
CSS0028025 Camellia sinensis var. sinensis HOM05D009304 ORTHO05D003109 5.0e-11 72.8 315 31.7
Cc05_g06660 Coffea canephora HOM05D009304 ORTHO05D003109 5.0e-11 72.8 328 33.5
Lsat_1_v5_gn_4_70241 Lactuca sativa HOM05D009304 ORTHO05D003109 1.1e-10 71.6 324 31.5
arahy.Tifrunner.gnm1.ann1.7X1CID Arachis hypogaea HOM05D010177 ORTHO05D003109 1.5e-10 71.2 344 31.7
CANSAT64G2194 Cannabis sativa HOM05D010652 ORTHO05D003109 1.5e-10 71.2 335 32.2
Peaxi162Scf00007g00287 Petunia axillaris HOM05D009304 ORTHO05D003109 2.5e-10 70.5 264 35.2
Aa31LG1G3780 Aethionema arabicum HOM05D004441 ORTHO05D003109 3.3e-10 70.1 264 32.6
QL08p037640 Quercus lobata HOM05D010652 ORTHO05D003109 3.3e-10 70.1 329 30.4
BraA09t41810Z Brassica rapa HOM05D004441 ORTHO05D003109 7.3e-10 68.9 305 34.4
Solyc07g054560.1 Solanum lycopersicum HOM05D009304 ORTHO05D003109 7.3e-10 68.9 328 32.6
Sopen07g028460 Solanum pennellii HOM05D009304 ORTHO05D003109 9.5e-10 68.6 329 32.2
C08p48340 Brassica napus HOM05D004441 ORTHO05D003109 1.2e-09 68.2 310 32.9
BolC8t52373H Brassica oleracea HOM05D004441 ORTHO05D003109 1.2e-09 68.2 310 32.9
Psat5g270560 Pisum sativum HOM05D010177 ORTHO05D003109 1.2e-09 68.2 335 32.5
PGR042G3342 Punica granatum HOM05D004441 ORTHO05D003109 2.1e-09 67.4 311 34.7
FvH4_6g44980 Fragaria vesca HOM05D010652 ORTHO05D003109 2.8e-09 67.0 342 31.0
Lalb_Chr19g0135401 Lupinus albus HOM05D010177 ORTHO05D003109 2.8e-09 67.0 337 32.0
Manes.13G149800 Manihot esculenta HOM05D010652 ORTHO05D003109 8.0e-09 65.5 311 32.2
Medtr4g089190 Medicago truncatula HOM05D004441 ORTHO05D003109 8.0e-09 65.5 323 31.9
Nn1g03959 Nelumbo nucifera HOM05D004441 ORTHO05D003109 8.0e-09 65.5 189 34.4
ECA236G4168 Erigeron canadensis HOM05D004441 ORTHO05D003109 1.0e-08 65.1 318 31.4
Psat0s2678g0120 Pisum sativum HOM05D004441 ORTHO05D003109 1.0e-08 65.1 310 33.2
A09p64850 Brassica napus HOM05D004441 ORTHO05D003109 1.8e-08 64.3 305 34.1
Lalb_Chr22g0356441 Lupinus albus HOM05D010177 ORTHO05D003109 1.8e-08 64.3 319 32.9
FAN14G1127 Fragaria x ananassa HOM05D010652 ORTHO05D003109 2.3e-08 63.9 345 30.1
Glyma.13G184100 Glycine max HOM05D004441 ORTHO05D003109 3.0e-08 63.5 308 31.8
Eucgr.A01789 Eucalyptus grandis HOM05D004441 ORTHO05D003109 1.2e-07 61.6 330 30.9
Glyma.13G299800 Glycine max HOM05D010177 ORTHO05D003109 2.0e-07 60.8 302 31.5
Lj3g0011122 Lotus japonicus HOM05D010177 ORTHO05D003109 2.0e-07 60.8 345 31.0
Nitab4.5_0002370g0010 Nicotiana tabacum HOM05D009304 ORTHO05D003109 2.6e-07 60.5 287 31.4
VMungo1080G0072 Vigna mungo HOM05D010177 ORTHO05D003109 2.6e-07 60.5 303 32.7
Solyc03g006600.1 Solanum lycopersicum HOM05D021131 ORTHO05D022971 3.4e-07 60.1 117 43.6
Dinv23691 Davidia involucrata HOM05D009304 ORTHO05D003109 4.4e-07 59.7 260 28.8
MBI18_g13205_MAGBIO Magnolia biondii HOM05D004441 ORTHO05D003109 4.4e-07 59.7 328 32.0
Sopen03g002610 Solanum pennellii HOM05D021131 ORTHO05D022971 4.4e-07 59.7 125 43.2
PGSC0003DMG400018324 Solanum tuberosum HOM05D009304 ORTHO05D003109 4.4e-07 59.7 332 31.3
SGA_v2.0_scaffold100G29660 Striga asiatica HOM05D004441 ORTHO05D003109 4.4e-07 59.7 289 32.2
FAN09G1981 Fragaria x ananassa HOM05D010652 ORTHO05D003109 5.7e-07 59.3 350 30.3
Nitab4.5_0008104g0020 Nicotiana tabacum HOM05D021131 ORTHO05D022971 5.7e-07 59.3 114 41.2
Dinv01395 Davidia involucrata HOM05D009304 ORTHO05D003109 9.8e-07 58.5 247 34.4
DCAR_009737 Daucus carota HOM05D009304 ORTHO05D003109 1.3e-06 58.2 269 34.2
Sabra05G0071200 Salix brachista HOM05D010652 ORTHO05D003109 1.7e-06 57.8 305 29.8
PGSC0003DMG400005055 Solanum tuberosum HOM05D021131 ORTHO05D022971 1.7e-06 57.8 126 41.3
Sed0024673 Sechium edule HOM05D004441 ORTHO05D003109 2.2e-06 57.4 227 32.6


User provided reference genes

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