Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib192G0809 Durio zibethinus HOM05D005040 ORTHO05D005984 8.3e-91 337.0 173 100.0
Gorai.011G077000 Gossypium raimondii HOM05D005040 ORTHO05D005984 3.5e-65 251.9 148 88.5
Gohir.A10G079800 Gossypium hirsutum HOM05D005040 ORTHO05D005984 6.0e-65 251.1 149 87.9
Thecc.06G086300 Theobroma cacao HOM05D005040 ORTHO05D005984 1.3e-64 250.0 148 86.5
Gohir.A09G083300 Gossypium hirsutum HOM05D005040 ORTHO05D005984 1.5e-63 246.5 148 85.1
Lalb_Chr04g0262641 Lupinus albus HOM05D005040 ORTHO05D005984 1.5e-63 246.5 148 81.1
Gohir.D10G071700 Gossypium hirsutum HOM05D005040 ORTHO05D005984 3.3e-63 245.4 148 86.5
Duzib235G0181 Durio zibethinus HOM05D005040 ORTHO05D005984 1.6e-62 243.0 145 86.2
Atru.chr1.3264 Acer truncatum HOM05D005040 ORTHO05D005984 2.1e-62 242.7 148 82.4
arahy.Tifrunner.gnm1.ann1.AGNB7P Arachis hypogaea HOM05D005040 ORTHO05D005984 2.1e-62 242.7 148 80.4
arahy.Tifrunner.gnm1.ann1.MTRR1H Arachis hypogaea HOM05D005040 ORTHO05D005984 2.1e-62 242.7 148 80.4
Lalb_Chr25g0279631 Lupinus albus HOM05D005040 ORTHO05D005984 3.7e-62 241.9 148 80.4
Gorai.006G098900 Gossypium raimondii HOM05D005040 ORTHO05D005984 1.4e-61 240.0 148 84.5
CSS0024080 Camellia sinensis var. sinensis HOM05D005040 ORTHO05D005984 2.4e-61 239.2 148 81.8
Manes.04G123000 Manihot esculenta HOM05D005040 ORTHO05D005984 2.4e-61 239.2 148 82.4
Rhsim08G0220800 Rhododendron simsii HOM05D005040 ORTHO05D005984 4.0e-61 238.4 151 80.8
Gohir.A05G129132 Gossypium hirsutum HOM05D005040 ORTHO05D005984 5.3e-61 238.0 144 82.6
Gohir.D09G083300 Gossypium hirsutum HOM05D005040 ORTHO05D005984 5.3e-61 238.0 148 83.8
vmacro16949 Vaccinium macrocarpon HOM05D005040 ORTHO05D005984 6.9e-61 237.7 148 77.7
Cc04_g03490 Coffea canephora HOM05D005040 ORTHO05D005984 1.2e-60 236.9 148 80.4
TPR.G24183 Trifolium pratense HOM05D005040 ORTHO05D005984 1.5e-60 236.5 148 79.7
Ciclev10026697m.g Citrus clementina HOM05D005040 ORTHO05D005984 2.0e-60 236.1 148 81.1
Nitab4.5_0008982g0010 Nicotiana tabacum HOM05D005040 ORTHO05D005984 2.0e-60 236.1 148 80.4
CiPaw.02G151500 Carya illinoinensis HOM05D005040 ORTHO05D005984 3.4e-60 235.3 148 80.4
Dinv38056 Davidia involucrata HOM05D005040 ORTHO05D005984 5.8e-60 234.6 148 81.1
Lj3g0025298 Lotus japonicus HOM05D005040 ORTHO05D005984 5.8e-60 234.6 147 78.2
Glyma.08G207000 Glycine max HOM05D005040 ORTHO05D005984 7.6e-60 234.2 148 77.0
Gorai.009G133000 Gossypium raimondii HOM05D005040 ORTHO05D005984 7.6e-60 234.2 144 81.9
arahy.Tifrunner.gnm1.ann1.QU6Z4C Arachis hypogaea HOM05D005040 ORTHO05D005984 1.0e-59 233.8 152 75.0
CSS0018986 Camellia sinensis var. sinensis HOM05D005040 ORTHO05D005984 1.3e-59 233.4 148 80.4
Manes.11G047900 Manihot esculenta HOM05D005040 ORTHO05D005984 1.3e-59 233.4 148 79.7
CSS0035607 Camellia sinensis var. sinensis HOM05D005040 ORTHO05D005984 1.7e-59 233.0 148 79.7
PGSC0003DMG400028614 Solanum tuberosum HOM05D005040 ORTHO05D005984 1.7e-59 233.0 148 79.7
ClCG09G002180 Citrullus lanatus HOM05D005040 ORTHO05D005984 2.9e-59 232.3 147 78.9
Medtr4g011980 Medicago truncatula HOM05D005040 ORTHO05D005984 2.9e-59 232.3 148 77.7
Phvul.010G150900 Phaseolus vulgaris HOM05D005040 ORTHO05D005984 2.9e-59 232.3 148 77.0
QL05p024322 Quercus lobata HOM05D005040 ORTHO05D005984 2.9e-59 232.3 148 80.4
VMungo0331G0128 Vigna mungo HOM05D005040 ORTHO05D005984 3.8e-59 231.9 148 76.4
arahy.Tifrunner.gnm1.ann1.PJIU2I Arachis hypogaea HOM05D005040 ORTHO05D005984 4.9e-59 231.5 148 76.4
CiPaw.01G239800 Carya illinoinensis HOM05D005040 ORTHO05D005984 4.9e-59 231.5 151 77.5
HanXRQChr09g0275291 Helianthus annuus HOM05D005040 ORTHO05D005984 4.9e-59 231.5 147 78.9
Peaxi162Scf00015g00334 Petunia axillaris HOM05D005040 ORTHO05D005984 4.9e-59 231.5 148 79.1
Glyma.07G006400 Glycine max HOM05D005040 ORTHO05D005984 6.5e-59 231.1 148 77.0
Nn2g11793 Nelumbo nucifera HOM05D005040 ORTHO05D005984 6.5e-59 231.1 148 77.7
Solyc03g120240.3 Solanum lycopersicum HOM05D005040 ORTHO05D005984 6.5e-59 231.1 148 77.7
Eucgr.J02995 Eucalyptus grandis HOM05D005040 ORTHO05D005984 8.4e-59 230.7 147 80.3
Sabra03G0031500 Salix brachista HOM05D005040 ORTHO05D005984 8.4e-59 230.7 147 82.3
PGSC0003DMG400002565 Solanum tuberosum HOM05D005040 ORTHO05D005984 8.4e-59 230.7 148 77.0
Lj3g0009600 Lotus japonicus HOM05D005040 ORTHO05D005984 1.1e-58 230.3 148 79.1
Sopen03g039120 Solanum pennellii HOM05D005040 ORTHO05D005984 1.1e-58 230.3 148 77.7
TWI75G0398 Tripterygium wilfordii HOM05D005040 ORTHO05D005984 1.1e-58 230.3 148 79.1
Prupe.3G071900 Prunus persica HOM05D005040 ORTHO05D005984 1.4e-58 229.9 148 77.0
MELO3C024227.2 Cucumis melo HOM05D005040 ORTHO05D005984 1.9e-58 229.6 147 77.6
Psat7g252720 Pisum sativum HOM05D005040 ORTHO05D005984 1.9e-58 229.6 148 76.4
GSVIVG01017116001 Vitis vinifera HOM05D005040 ORTHO05D005984 1.9e-58 229.6 148 79.1
Nitab4.5_0000671g0070 Nicotiana tabacum HOM05D005040 ORTHO05D005984 2.5e-58 229.2 148 77.7
Nitab4.5_0010263g0010 Nicotiana tabacum HOM05D005040 ORTHO05D005984 2.5e-58 229.2 148 77.7
TAR626G1436 Trochodendron aralioides HOM05D005040 ORTHO05D005984 2.5e-58 229.2 145 79.3
CsaV3_7G033130 Cucumis sativus L. HOM05D005040 ORTHO05D005984 3.2e-58 228.8 147 77.6
TAR624G1120 Trochodendron aralioides HOM05D005040 ORTHO05D005984 5.5e-58 228.0 148 77.7
PGR102G2548 Punica granatum HOM05D005040 ORTHO05D005984 7.1e-58 227.6 148 77.7
Lj9C507G12 Lonicera japonica HOM05D005040 ORTHO05D005984 9.3e-58 227.3 148 77.0
Sc21g0005090 Simmondsia chinensis HOM05D005040 ORTHO05D005984 9.3e-58 227.3 148 78.4
MD17G1196000 Malus domestica HOM05D005040 ORTHO05D005984 1.2e-57 226.9 148 77.7
MD09G1213900 Malus domestica HOM05D005040 ORTHO05D005984 1.6e-57 226.5 148 77.0
Potri.001G179500 Populus trichocarpa HOM05D005040 ORTHO05D005984 1.6e-57 226.5 148 79.7
TWI18G1133 Tripterygium wilfordii HOM05D005040 ORTHO05D005984 1.6e-57 226.5 148 76.4
Gohir.D05G128900 Gossypium hirsutum HOM05D005040 ORTHO05D005984 2.1e-57 226.1 144 81.2
Nn8g39231 Nelumbo nucifera HOM05D005040 ORTHO05D005984 2.1e-57 226.1 149 79.2
Sopen12g022320 Solanum pennellii HOM05D005040 ORTHO05D005984 2.1e-57 226.1 148 77.7
AUR62011626 Chenopodium quinoa HOM05D005040 ORTHO05D005984 3.5e-57 225.3 147 76.2
CAN.G438.63 Capsicum annuum HOM05D005040 ORTHO05D005984 4.6e-57 224.9 148 76.4
EL10Ac9g21995 Beta vulgaris HOM05D005040 ORTHO05D005984 6.0e-57 224.6 148 76.4
HanXRQChr16g0501001 Helianthus annuus HOM05D005040 ORTHO05D005984 7.9e-57 224.2 147 76.9
vmacro18916 Vaccinium macrocarpon HOM05D005040 ORTHO05D005984 7.9e-57 224.2 145 79.3
DCAR_007558 Daucus carota HOM05D005040 ORTHO05D005984 1.0e-56 223.8 148 75.7
CANSAT56G1939 Cannabis sativa HOM05D005040 ORTHO05D005984 1.3e-56 223.4 147 73.5
Migut.I00862 Erythranthe guttata HOM05D005040 ORTHO05D005984 1.3e-56 223.4 148 75.7
Rhsim12G0197400 Rhododendron simsii HOM05D005040 ORTHO05D005984 1.3e-56 223.4 149 73.8
Lj5C61G9 Lonicera japonica HOM05D001315 ORTHO05D005984 1.8e-56 223.0 148 77.0
SGA_v2.0_scaffold37G14817 Striga asiatica HOM05D005040 ORTHO05D005984 1.8e-56 223.0 149 75.2
Oeu025385.1 Olea europaea HOM05D005040 ORTHO05D005984 3.9e-56 221.9 147 78.2
PSO063G7160 Papaver somniferum HOM05D005040 ORTHO05D005984 3.9e-56 221.9 147 74.1
PSO782G4813 Papaver somniferum HOM05D005040 ORTHO05D005984 1.1e-55 220.3 147 73.5
unitig_8.g3893 Utricularia gibba HOM05D005040 ORTHO05D005984 1.1e-55 220.3 147 75.5
HPP92_007677 Vanilla planifolia HOM05D005040 ORTHO05D005984 1.1e-55 220.3 147 74.1
FvH4_6g31060 Fragaria vesca HOM05D005040 ORTHO05D005984 1.5e-55 219.9 150 75.3
FAN09G4279 Fragaria x ananassa HOM05D005040 ORTHO05D005984 1.5e-55 219.9 150 75.3
FAN14G0270 Fragaria x ananassa HOM05D005040 ORTHO05D005984 1.5e-55 219.9 150 75.3
Sabra01G0147300 Salix brachista HOM05D005040 ORTHO05D005984 1.5e-55 219.9 148 77.7
Potri.003G056100 Populus trichocarpa HOM05D005040 ORTHO05D005984 1.9e-55 219.5 144 79.9
FAN02G3733 Fragaria x ananassa HOM05D005040 ORTHO05D005984 4.3e-55 218.4 150 74.7
Oeu033483.1 Olea europaea HOM05D005040 ORTHO05D005984 4.3e-55 218.4 148 76.4
Sed0010677 Sechium edule HOM05D005040 ORTHO05D005984 7.4e-55 217.6 147 72.1
Aa31LG4G290 Aethionema arabicum HOM05D001315 ORTHO05D001618 9.6e-55 217.2 148 70.9
CARHR074500 Cardamine hirsuta HOM05D005040 ORTHO05D005984 2.1e-54 216.1 148 70.9
Zm00001eb161080 Zea mays HOM05D005040 ORTHO05D005984 2.8e-54 215.7 147 72.1
RcHm_v2.0_Chr2g0137751 Rosa chinensis HOM05D005040 ORTHO05D005984 3.7e-54 215.3 150 72.7
FAN05G0686 Fragaria x ananassa HOM05D005040 ORTHO05D005984 4.8e-54 214.9 150 74.7
Sp5g35760 Schrenkiella parvula HOM05D005040 ORTHO05D005984 4.8e-54 214.9 152 69.1
Hund00613 Selenicereus undatus HOM05D005040 ORTHO05D005984 4.8e-54 214.9 148 71.6
BcaC03g16009 Brassica carinata HOM05D005040 ORTHO05D005984 6.2e-54 214.5 148 71.6
C02p37640 Brassica napus HOM05D005040 ORTHO05D005984 8.2e-54 214.2 148 70.9
BraA02t07378Z Brassica rapa HOM05D005040 ORTHO05D005984 8.2e-54 214.2 148 70.3
AL2G41560 Arabidopsis lyrata HOM05D005040 ORTHO05D005984 1.1e-53 213.8 148 70.9
SGA_v2.0_scaffold4G01995 Striga asiatica HOM05D005040 ORTHO05D005984 1.8e-53 213.0 148 71.6
AT1G79985 Arabidopsis thaliana HOM05D005040 ORTHO05D005984 2.4e-53 212.6 148 71.6
Os01g0593600 Oryza sativa ssp. japonica HOM05D005040 ORTHO05D005984 4.1e-53 211.8 147 69.4
BolC2t09779H Brassica oleracea HOM05D005040 ORTHO05D005984 5.3e-53 211.5 148 70.9
A07p26430 Brassica napus HOM05D001315 ORTHO05D001618 6.9e-53 211.1 148 69.6
C06p28820 Brassica napus HOM05D001315 ORTHO05D001618 6.9e-53 211.1 148 69.6
BraA07t30287Z Brassica rapa HOM05D001315 ORTHO05D001618 6.9e-53 211.1 148 69.6
Hund06608 Selenicereus undatus HOM05D005040 ORTHO05D005984 1.5e-52 209.9 148 68.9
Thhalv10019282m.g Eutrema salsugineum HOM05D005040 ORTHO05D005984 2.0e-52 209.5 148 68.2
Gorai.002G059200 Gossypium raimondii HOM05D005040 ORTHO05D005984 2.2e-51 206.1 143 73.4
Carub.0002s2753 Capsella rubella HOM05D005040 ORTHO05D005984 3.8e-51 205.3 148 68.2
THA.LOC104813561 Tarenaya hassleriana HOM05D005040 ORTHO05D005984 7.1e-50 201.1 148 68.9
THA.LOC104821737 Tarenaya hassleriana HOM05D005040 ORTHO05D005984 7.1e-50 201.1 148 68.9
SEGI_18303 Sequoiadendron giganteum HOM05D005040 ORTHO05D005984 9.3e-50 200.7 145 67.6
A02p23850 Brassica napus HOM05D005040 ORTHO05D005984 2.1e-49 199.5 166 62.0
FvH4_6g49470 Fragaria vesca HOM05D005040 ORTHO05D005984 3.9e-48 195.3 150 66.7
FAN14G2190 Fragaria x ananassa HOM05D005040 ORTHO05D005984 1.1e-47 193.7 150 65.3
Gohir.A02G121600 Gossypium hirsutum HOM05D005040 ORTHO05D005984 1.1e-47 193.7 153 67.3
Nitab4.5_0002438g0060 Nicotiana tabacum HOM05D005040 ORTHO05D005984 1.5e-47 193.4 148 68.2
ECA232G2706 Erigeron canadensis HOM05D005040 ORTHO05D005984 6.3e-46 188.0 120 80.0
Lsat_1_v5_gn_4_103600 Lactuca sativa HOM05D005040 ORTHO05D005984 1.1e-45 187.2 116 78.4
Actinidia24761 Actinidia chinensis HOM05D005040 ORTHO05D005984 2.4e-45 186.0 114 80.7
BcaB05g25300 Brassica carinata HOM05D005040 ORTHO05D005984 6.9e-45 184.5 148 63.5
BcaC08g45282 Brassica carinata HOM05D005040 ORTHO05D005984 1.0e-43 180.6 123 70.7
Mapoly0002s0050 Marchantia polymorpha HOM05D005040 ORTHO05D005984 4.2e-42 175.3 145 57.2
CBR_g53740 Chara braunii HOM05D005040 ORTHO05D005984 2.7e-41 172.6 148 55.4
CDE02G1346 Ceratophyllum demersum HOM05D005040 ORTHO05D005984 1.1e-39 167.2 103 72.8
CDE04G1379 Ceratophyllum demersum HOM05D005040 ORTHO05D005984 1.5e-39 166.8 103 71.8
unitig_22.g5468 Utricularia gibba HOM05D005040 ORTHO05D005984 4.1e-37 158.7 175 54.3
Pp3c14_26240 Physcomitrium patens HOM05D005040 ORTHO05D005984 1.1e-34 150.6 145 50.3
Actinidia01801 Actinidia chinensis HOM05D005040 ORTHO05D005984 9.4e-34 147.5 95 81.1
Actinidia32759 Actinidia chinensis HOM05D005040 ORTHO05D005984 1.5e-31 140.2 73 90.4
Lalb_Chr01g0012631 Lupinus albus HOM05D005040 ORTHO05D005984 7.4e-31 137.9 70 87.1
arahy.Tifrunner.gnm1.ann1.1DTY35 Arachis hypogaea HOM05D005040 ORTHO05D005984 4.8e-30 135.2 142 54.2
Cre10.g423950 Chlamydomonas reinhardtii HOM05D005040 ORTHO05D005984 4.8e-30 135.2 145 46.2
Gohir.D03G064100 Gossypium hirsutum HOM05D005040 ORTHO05D005984 1.4e-29 133.7 100 73.0
Zm00001eb357580 Zea mays HOM05D005040 ORTHO05D005984 2.2e-27 126.3 69 78.3
Gohir.D02G105550 Gossypium hirsutum HOM05D005040 ORTHO05D005984 1.6e-25 120.2 58 89.7
Gorai.005G119900 Gossypium raimondii HOM05D005040 ORTHO05D005984 1.6e-25 120.2 58 89.7
PRCOL_00001887 Prasinoderma coloniale HOM05D005040 ORTHO05D005984 3.6e-25 119.0 142 43.7
Lalb_Chr01g0012641 Lupinus albus HOM05D005040 ORTHO05D005984 3.1e-21 105.9 75 74.7
SalBow2G1342 Salvia bowleyana HOM05D005040 ORTHO05D005984 5.0e-19 98.6 84 69.0
MBI01_g34903_MAGBIO Magnolia biondii HOM05D005040 ORTHO05D005984 8.5e-19 97.8 75 69.3
DCAR_026311 Daucus carota HOM05D001315 ORTHO05D001618 9.4e-18 94.4 78 69.2
SalBow2G3126 Salvia bowleyana HOM05D005040 ORTHO05D005984 1.0e-16 90.9 89 61.8
Pp3c17_23510 Physcomitrium patens HOM05D005040 ORTHO05D005984 1.2e-12 77.4 145 33.8
Solyc12g043060.1 Solanum lycopersicum HOM05D005040 ORTHO05D005984 8.0e-09 64.7 53 67.9


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