Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib192G0218 Durio zibethinus HOM05D004845 ORTHO05D005957 2.1e-163 578.9 288 100.0
Duzib160G0801 Durio zibethinus HOM05D004845 ORTHO05D005957 1.9e-108 396.4 274 78.1
Thecc.06G108000 Theobroma cacao HOM05D004845 ORTHO05D005957 6.9e-106 387.9 274 75.2
Duzib235G0635 Durio zibethinus HOM05D004845 ORTHO05D005957 1.2e-105 387.1 274 75.5
Gohir.A05G133700 Gossypium hirsutum HOM05D004845 ORTHO05D005957 9.6e-92 340.9 274 68.6
Gorai.009G139700 Gossypium raimondii HOM05D004845 ORTHO05D005957 2.1e-91 339.7 274 67.9
Gohir.D05G135700 Gossypium hirsutum HOM05D004845 ORTHO05D005957 1.1e-90 337.4 274 67.5
COL.COLO4_30609 Corchorus olitorius HOM05D004845 ORTHO05D005957 4.2e-87 325.5 245 72.2
Dinv37932 Davidia involucrata HOM05D004845 ORTHO05D005957 7.4e-84 314.7 275 63.3
Dinv30397 Davidia involucrata HOM05D004845 ORTHO05D005957 9.0e-82 307.8 275 62.9
Potri.003G033100 Populus trichocarpa HOM05D004845 ORTHO05D005957 3.6e-78 295.8 245 63.3
Rhsim08G0231600 Rhododendron simsii HOM05D004845 ORTHO05D005957 1.2e-73 280.8 298 55.0
Manes.04G137600 Manihot esculenta HOM05D004845 ORTHO05D005957 1.5e-73 280.4 276 59.4
Atru.chr1.3636 Acer truncatum HOM05D004845 ORTHO05D005957 5.9e-73 278.5 275 57.8
Cfa003605 Carpinus fangiana HOM05D004845 ORTHO05D005957 5.9e-73 278.5 233 63.1
TAR629G3185 Trochodendron aralioides HOM05D004845 ORTHO05D005957 1.0e-72 277.7 281 56.9
Ciclev10024729m.g Citrus clementina HOM05D004845 ORTHO05D005957 1.7e-72 276.9 276 59.1
Sabra03G0019000 Salix brachista HOM05D004845 ORTHO05D005957 2.9e-72 276.2 277 57.0
QL05p015844 Quercus lobata HOM05D004845 ORTHO05D005957 2.5e-71 273.1 275 57.8
DCAR_026375 Daucus carota HOM05D004845 ORTHO05D005957 1.6e-70 270.4 279 56.6
CiPaw.02G142000 Carya illinoinensis HOM05D004845 ORTHO05D005957 2.1e-70 270.0 275 57.5
GSVIVG01016889001 Vitis vinifera HOM05D004845 ORTHO05D005957 1.4e-69 267.3 277 57.0
Nn1g08771 Nelumbo nucifera HOM05D004845 ORTHO05D005957 1.5e-68 263.8 249 59.4
CANSAT56G3316 Cannabis sativa HOM05D004845 ORTHO05D005957 3.7e-67 259.2 274 54.7
Glyma.08G196100 Glycine max HOM05D004845 ORTHO05D005957 3.7e-67 259.2 246 57.3
Glyma.07G012400 Glycine max HOM05D004845 ORTHO05D005957 4.8e-67 258.8 246 57.7
ClCG07G013620 Citrullus lanatus HOM05D004845 ORTHO05D005957 6.3e-67 258.5 273 54.2
TWI31G1049 Tripterygium wilfordii HOM05D004845 ORTHO05D005957 4.1e-66 255.8 282 55.3
Manes.11G028800 Manihot esculenta HOM05D004845 ORTHO05D005957 9.1e-66 254.6 249 55.8
Ca_23299_v3 Cicer arietinum L. HOM05D004845 ORTHO05D005957 3.4e-65 252.7 245 58.4
Nitab4.5_0004848g0010 Nicotiana tabacum HOM05D004845 ORTHO05D005957 4.5e-65 252.3 279 53.8
vmacro18819 Vaccinium macrocarpon HOM05D004845 ORTHO05D005957 4.5e-65 252.3 275 53.1
DCAR_007608 Daucus carota HOM05D004845 ORTHO05D005957 1.7e-64 250.4 279 55.9
arahy.Tifrunner.gnm1.ann1.7F0ZFP Arachis hypogaea HOM05D004845 ORTHO05D005957 3.8e-64 249.2 248 56.5
CsaV3_3G044010 Cucumis sativus L. HOM05D004845 ORTHO05D005957 6.5e-64 248.4 274 53.3
RcHm_v2.0_Chr2g0142521 Rosa chinensis HOM05D004845 ORTHO05D005957 8.5e-64 248.1 277 54.9
Lj3g0006882 Lotus japonicus HOM05D004845 ORTHO05D005957 1.1e-63 247.7 246 55.7
Actinidia21743 Actinidia chinensis HOM05D004845 ORTHO05D005957 1.4e-63 247.3 220 61.4
MELO3C013040.2 Cucumis melo HOM05D004845 ORTHO05D005957 5.5e-63 245.4 274 52.9
Sed0014548 Sechium edule HOM05D004845 ORTHO05D005957 2.1e-62 243.4 274 53.3
VMungo0331G0639 Vigna mungo HOM05D004845 ORTHO05D005957 7.9e-62 241.5 277 53.4
Medtr8g015620 Medicago truncatula HOM05D004845 ORTHO05D005957 2.3e-61 240.0 247 55.1
FAN09G4600 Fragaria x ananassa HOM05D004845 ORTHO05D005957 1.5e-60 237.3 276 52.5
Lj3g0020048 Lotus japonicus HOM05D004845 ORTHO05D005957 2.0e-60 236.9 246 53.3
PGR102G0505 Punica granatum HOM05D004845 ORTHO05D005957 3.3e-60 236.1 277 50.5
Lalb_Chr04g0263091 Lupinus albus HOM05D004845 ORTHO05D005957 4.4e-60 235.7 227 57.3
Sc12g0009860 Simmondsia chinensis HOM05D004845 ORTHO05D005957 4.4e-60 235.7 275 53.5
MSTRG.22604 Avicennia marina HOM05D004845 ORTHO05D005957 7.4e-60 235.0 275 50.2
THA.LOC104817934 Tarenaya hassleriana HOM05D004845 ORTHO05D005957 9.7e-60 234.6 274 50.4
arahy.Tifrunner.gnm1.ann1.JSQ5P9 Arachis hypogaea HOM05D004845 ORTHO05D005957 1.7e-59 233.8 277 51.3
Sed0023831 Sechium edule HOM05D004845 ORTHO05D005957 1.4e-58 230.7 275 50.9
THA.LOC104810560 Tarenaya hassleriana HOM05D004845 ORTHO05D005957 3.1e-58 229.6 275 49.1
FvH4_6g32970 Fragaria vesca HOM05D004845 ORTHO05D005957 4.1e-58 229.2 276 51.4
Cc04_g02180 Coffea canephora HOM05D004845 ORTHO05D005957 7.0e-58 228.4 275 49.5
FAN02G0586 Fragaria x ananassa HOM05D004845 ORTHO05D005957 2.0e-57 226.9 276 51.4
Prupe.3G052500 Prunus persica HOM05D004845 ORTHO05D005957 2.0e-57 226.9 245 52.2
MD09G1196000 Malus domestica HOM05D004845 ORTHO05D005957 3.5e-57 226.1 250 53.6
SGA_v2.0_scaffold71G23747 Striga asiatica HOM05D004845 ORTHO05D005957 4.5e-57 225.7 276 50.4
Phvul.010G141800 Phaseolus vulgaris HOM05D004845 ORTHO05D005957 5.9e-57 225.3 246 52.0
FAN14G1946 Fragaria x ananassa HOM05D004845 ORTHO05D005957 2.9e-56 223.0 276 51.1
Oeu026736.3 Olea europaea HOM05D004845 ORTHO05D005957 2.9e-56 223.0 274 49.6
Cpa.g.sc131.35 Carica papaya HOM05D004845 ORTHO05D005957 3.8e-56 222.6 213 59.6
HanXRQChr09g0276331 Helianthus annuus HOM05D004845 ORTHO05D005957 6.5e-56 221.9 281 51.2
Aqoxy7G00060 Aquilegia oxysepala HOM05D004845 ORTHO05D005957 1.5e-55 220.7 274 49.6
Sopen03g040190 Solanum pennellii HOM05D004845 ORTHO05D005957 1.9e-55 220.3 276 51.1
Solyc03g121380.3 Solanum lycopersicum HOM05D004845 ORTHO05D005957 3.2e-55 219.5 276 51.1
Lsat_1_v5_gn_4_95940 Lactuca sativa HOM05D004845 ORTHO05D005957 2.1e-54 216.9 277 52.7
AUR62023919 Chenopodium quinoa HOM05D004845 ORTHO05D005957 3.6e-54 216.1 282 47.9
Peaxi162Scf00038g01322 Petunia axillaris HOM05D004845 ORTHO05D005957 3.6e-54 216.1 290 47.6
FAN05G2503 Fragaria x ananassa HOM05D004845 ORTHO05D005957 4.7e-54 215.7 230 54.8
CAN.G1668.10 Capsicum annuum HOM05D004845 ORTHO05D005957 1.8e-53 213.8 279 48.4
Thhalv10019924m.g Eutrema salsugineum HOM05D004845 ORTHO05D005957 1.8e-53 213.8 276 47.1
MD17G1176700 Malus domestica HOM05D004845 ORTHO05D005957 4.0e-53 212.6 249 50.6
Sp3g19330 Schrenkiella parvula HOM05D004845 ORTHO05D005957 6.3e-51 205.3 276 45.3
CDE10G0270 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 8.2e-51 204.9 217 53.9
SGA_v2.0_scaffold45G16992 Striga asiatica HOM05D004845 ORTHO05D005957 8.2e-51 204.9 275 47.6
CDE10G0876 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 1.8e-50 203.8 292 44.5
EL10Ac9g21102 Beta vulgaris HOM05D004845 ORTHO05D005957 2.4e-50 203.4 276 48.2
Oeu052809.1 Olea europaea HOM05D004845 ORTHO05D005957 2.4e-50 203.4 242 50.8
PSO170G6909 Papaver somniferum HOM05D004845 ORTHO05D005957 4.1e-50 202.6 248 52.0
Carub.0003s2130 Capsella rubella HOM05D004845 ORTHO05D005957 1.3e-48 197.6 276 44.9
ATR0730G184 Amborella trichopoda HOM05D004845 ORTHO05D005957 2.9e-48 196.4 284 45.4
BcaC05g28184 Brassica carinata HOM05D004845 ORTHO05D005957 2.9e-48 196.4 276 44.9
A05p27330 Brassica napus HOM05D004845 ORTHO05D005957 2.9e-48 196.4 276 44.6
C05p42240 Brassica napus HOM05D004845 ORTHO05D005957 2.9e-48 196.4 276 44.9
BolC5t32952H Brassica oleracea HOM05D004845 ORTHO05D005957 2.9e-48 196.4 276 44.9
BraA05t21625Z Brassica rapa HOM05D004845 ORTHO05D005957 3.8e-48 196.1 276 44.9
Hund07666 Selenicereus undatus HOM05D004845 ORTHO05D005957 8.5e-48 194.9 245 49.4
AL3G35330 Arabidopsis lyrata HOM05D004845 ORTHO05D005957 2.5e-47 193.4 276 45.3
BcaB06g26218 Brassica carinata HOM05D004845 ORTHO05D005957 3.2e-47 193.0 276 43.8
AUR62038325 Chenopodium quinoa HOM05D004845 ORTHO05D005957 3.2e-47 193.0 282 45.0
Aa31LG8G7990 Aethionema arabicum HOM05D004845 ORTHO05D005957 1.4e-45 187.6 279 42.7
Lalb_Chr15g0087461 Lupinus albus HOM05D004845 ORTHO05D005957 3.0e-45 186.4 235 51.1
Migut.I01002 Erythranthe guttata HOM05D004845 ORTHO05D005957 5.2e-45 185.7 275 45.5
AT3G21290 Arabidopsis thaliana HOM05D004845 ORTHO05D005957 5.7e-44 182.2 276 43.8
ECA232G1750 Erigeron canadensis HOM05D004845 ORTHO05D005957 7.5e-44 181.8 277 44.0
HanXRQChr05g0140141 Helianthus annuus HOM05D004845 ORTHO05D005957 6.3e-43 178.7 277 46.6
Ah.01g016900 Amaranthus hybridus HOM05D004845 ORTHO05D005957 2.7e-41 173.3 242 45.9
Zm00001eb006560 Zea mays HOM05D004845 ORTHO05D005957 5.5e-39 165.6 251 47.0
unitig_749.g14048 Utricularia gibba HOM05D004845 ORTHO05D005957 1.2e-36 157.9 280 40.0
HPP92_028291 Vanilla planifolia HOM05D004845 ORTHO05D005957 5.7e-36 155.6 112 69.6
Zm00001eb401540 Zea mays HOM05D004845 ORTHO05D005957 5.7e-36 155.6 249 43.8
SEGI_05846 Sequoiadendron giganteum HOM05D004845 ORTHO05D005957 3.1e-34 149.8 285 37.2
SEGI_07021 Sequoiadendron giganteum HOM05D004845 ORTHO05D005957 3.1e-34 149.8 285 37.2
Lalb_Chr14g0372871 Lupinus albus HOM05D004845 ORTHO05D005957 2.0e-33 147.1 91 76.9
Actinidia32134 Actinidia chinensis HOM05D004845 ORTHO05D005957 1.0e-32 144.8 199 47.7
Haze_15921 Corylus avellana HOM05D004845 ORTHO05D005957 6.1e-30 135.6 144 56.2
Lj5C49T6 Lonicera japonica HOM05D004845 ORTHO05D005957 8.6e-24 115.2 189 44.4
SHI11164 Sapria himalayana HOM05D004845 ORTHO05D003034 2.8e-22 110.2 64 75.0
TPR.G8763 Trifolium pratense HOM05D004845 ORTHO05D005957 6.2e-22 109.0 156 42.9
BcaC09g49066 Brassica carinata HOM05D004845 ORTHO05D005957 2.3e-21 107.1 78 65.4
C01p42960 Brassica napus HOM05D004845 ORTHO05D005957 4.0e-21 106.3 68 72.1
BolC1t04240H Brassica oleracea HOM05D004845 ORTHO05D005957 4.0e-21 106.3 68 72.1
Eucgr.J02886 Eucalyptus grandis HOM05D004845 ORTHO05D005957 3.9e-16 89.7 156 39.1
Pp3c12_1570 Physcomitrium patens HOM05D004845 ORTHO05D005957 1.4e-13 81.3 148 37.2
Lalb_Chr14g0372881 Lupinus albus HOM05D004845 ORTHO05D005957 3.1e-13 80.1 159 42.8
CBR_g20996 Chara braunii HOM05D004845 ORTHO05D005957 4.4e-12 76.3 98 43.9
Mapoly0021s0057 Marchantia polymorpha HOM05D004845 ORTHO05D005957 5.8e-12 75.9 180 33.3
Zm00001eb424050 Zea mays HOM05D002942 ORTHO05D003270 9.8e-12 75.1 51 64.7
Medtr1g021875 Medicago truncatula HOM05D004845 ORTHO05D005957 2.2e-11 73.9 67 59.7
SMO334G0114 Selaginella moellendorffii HOM05D004845 ORTHO05D005957 3.7e-11 73.2 94 41.5
AagrBONN_evm.TU.Sc2ySwM_344.5033 Anthoceros agrestis HOM05D004845 ORTHO05D005957 8.3e-11 72.0 220 30.5
Medtr8g015610 Medicago truncatula HOM05D004845 ORTHO05D005957 1.6e-09 67.8 159 35.8


User provided reference genes

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