Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib192G0190 Durio zibethinus HOM05D000566 ORTHO05D008456 2.5e-107 392.1 198 100.0
Thecc.06G173200 Theobroma cacao HOM05D000566 ORTHO05D008456 1.9e-83 312.8 195 84.6
Gohir.D06G136400 Gossypium hirsutum HOM05D000566 ORTHO05D008456 5.6e-83 311.2 198 83.3
Gorai.010G158600 Gossypium raimondii HOM05D000566 ORTHO05D008456 9.6e-83 310.5 198 82.8
Gohir.A06G134006 Gossypium hirsutum HOM05D000566 ORTHO05D008456 4.8e-82 308.1 198 83.3
COL.COLO4_31322 Corchorus olitorius HOM05D000566 ORTHO05D000686 8.1e-82 307.4 195 82.6
Ciclev10016472m.g Citrus clementina HOM05D000566 ORTHO05D008456 2.8e-66 255.8 158 84.2
Eucgr.E02712 Eucalyptus grandis HOM05D000566 ORTHO05D008456 1.1e-65 253.8 191 70.2
Atru.chr10.1700 Acer truncatum HOM05D000566 ORTHO05D008456 4.0e-65 251.9 194 73.7
TWI38G1860 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 1.2e-64 250.4 154 85.7
CANSAT35G0195 Cannabis sativa HOM05D000566 ORTHO05D008456 3.4e-64 248.8 201 70.6
MELO3C007220.2 Cucumis melo HOM05D000566 ORTHO05D008456 1.3e-63 246.9 191 73.3
Sc05g0007190 Simmondsia chinensis HOM05D000566 ORTHO05D008456 8.4e-63 244.2 153 81.0
Haze_06259 Corylus avellana HOM05D000566 ORTHO05D008456 3.2e-62 242.3 196 71.4
Cfa000591 Carpinus fangiana HOM05D000566 ORTHO05D008456 7.1e-62 241.1 196 70.9
Potri.011G064600 Populus trichocarpa HOM05D000566 ORTHO05D008456 7.1e-62 241.1 177 75.1
QL05p046292 Quercus lobata HOM05D000566 ORTHO05D008456 1.6e-61 240.0 200 68.0
Hund23960 Selenicereus undatus HOM05D000566 ORTHO05D008456 3.5e-61 238.8 153 79.7
Glyma.13G171000 Glycine max HOM05D000566 ORTHO05D008456 4.6e-61 238.4 176 73.9
Prupe.4G059300 Prunus persica HOM05D000566 ORTHO05D008456 4.6e-61 238.4 200 68.5
Sed0006380 Sechium edule HOM05D000566 ORTHO05D008456 4.6e-61 238.4 177 71.8
TAR626G0526 Trochodendron aralioides HOM05D000566 ORTHO05D008456 4.6e-61 238.4 200 67.5
Manes.16G037200 Manihot esculenta HOM05D000566 ORTHO05D008456 6.0e-61 238.0 206 68.0
CiPaw.09G068300 Carya illinoinensis HOM05D000566 ORTHO05D008456 1.0e-60 237.3 198 69.2
ClCG01G023650 Citrullus lanatus HOM05D000566 ORTHO05D008456 1.3e-60 236.9 174 74.7
Hma1.2p1_0437F.1_g152980 Hydrangea macrophylla HOM05D000566 ORTHO05D008456 2.3e-60 236.1 172 73.3
Ah.09g233690 Amaranthus hybridus HOM05D000566 ORTHO05D008456 3.0e-60 235.7 152 77.6
Ca_26053_v3 Cicer arietinum L. HOM05D000566 ORTHO05D008456 3.9e-60 235.3 141 85.8
Dinv04627 Davidia involucrata HOM05D000566 ORTHO05D008456 3.9e-60 235.3 199 66.3
AUR62036584 Chenopodium quinoa HOM05D000566 ORTHO05D008456 6.7e-60 234.6 120 96.7
Lj4g0018718 Lotus japonicus HOM05D000566 ORTHO05D008456 1.1e-59 233.8 176 71.6
Lalb_Chr05g0218771 Lupinus albus HOM05D000566 ORTHO05D008456 1.1e-59 233.8 178 72.5
MD10G1282600 Malus domestica HOM05D000566 ORTHO05D008456 1.1e-59 233.8 188 68.6
Sabra11G0046400 Salix brachista HOM05D000566 ORTHO05D008456 1.1e-59 233.8 197 68.0
THA.LOC104814247 Tarenaya hassleriana HOM05D000566 ORTHO05D008456 1.1e-59 233.8 155 76.8
FAN21G0306 Fragaria x ananassa HOM05D000566 ORTHO05D008456 1.5e-59 233.4 200 64.0
Rhsim13G0191700 Rhododendron simsii HOM05D000566 ORTHO05D000686 1.9e-59 233.0 184 67.9
RcHm_v2.0_Chr5g0010321 Rosa chinensis HOM05D000566 ORTHO05D008456 1.9e-59 233.0 197 66.5
vmacro03936 Vaccinium macrocarpon HOM05D000566 ORTHO05D008456 2.5e-59 232.6 157 77.7
Lalb_Chr16g0384251 Lupinus albus HOM05D000566 ORTHO05D008456 3.3e-59 232.3 171 72.5
Oeu039926.1 Olea europaea HOM05D000566 ORTHO05D008456 5.7e-59 231.5 141 83.7
Psat7g118880 Pisum sativum HOM05D000566 ORTHO05D008456 5.7e-59 231.5 177 74.0
TPR.G16280 Trifolium pratense HOM05D000566 ORTHO05D008456 5.7e-59 231.5 190 68.4
HanXRQChr07g0186931 Helianthus annuus HOM05D000566 ORTHO05D008456 7.4e-59 231.1 180 67.2
FAN25G1525 Fragaria x ananassa HOM05D000566 ORTHO05D000686 9.6e-59 230.7 154 76.0
FAN11G2813 Fragaria x ananassa HOM05D000566 ORTHO05D008456 1.3e-58 230.3 200 65.0
PSO675G8854 Papaver somniferum HOM05D000566 ORTHO05D008456 1.3e-58 230.3 148 79.1
FvH4_3g07991 Fragaria vesca HOM05D000566 ORTHO05D008456 2.1e-58 229.6 200 65.0
Sp1g24970 Schrenkiella parvula HOM05D000566 ORTHO05D008456 3.7e-58 228.8 173 70.5
Aqoxy1G03201 Aquilegia oxysepala HOM05D000566 ORTHO05D008456 4.8e-58 228.4 125 88.8
Phvul.003G058300 Phaseolus vulgaris HOM05D000566 ORTHO05D008456 4.8e-58 228.4 143 81.8
PGR042G3563 Punica granatum HOM05D000566 ORTHO05D008456 4.8e-58 228.4 194 65.5
MSTRG.7396 Avicennia marina HOM05D000566 ORTHO05D008456 6.3e-58 228.0 190 66.8
Actinidia16807 Actinidia chinensis HOM05D000566 ORTHO05D008456 8.2e-58 227.6 141 81.6
Cc02_g14640 Coffea canephora HOM05D000566 ORTHO05D008456 8.2e-58 227.6 122 91.8
Medtr4g087750 Medicago truncatula HOM05D000566 ORTHO05D008456 8.2e-58 227.6 189 67.2
GSVIVG01021190001 Vitis vinifera HOM05D000566 ORTHO05D008456 1.1e-57 227.3 122 91.0
Lsat_1_v5_gn_4_50020 Lactuca sativa HOM05D000566 ORTHO05D008456 1.4e-57 226.9 193 66.8
PSO541G3700 Papaver somniferum HOM05D000566 ORTHO05D008456 1.4e-57 226.9 143 80.4
VMungo0251G1655 Vigna mungo HOM05D000566 ORTHO05D008456 2.4e-57 226.1 144 79.9
ECA234G0195 Erigeron canadensis HOM05D000566 ORTHO05D000686 3.1e-57 225.7 133 82.0
Medtr4g087740 Medicago truncatula HOM05D000566 ORTHO05D008456 3.1e-57 225.7 138 83.3
Peaxi162Scf01479g00012 Petunia axillaris HOM05D000566 ORTHO05D008456 4.1e-57 225.3 159 71.1
CAN.G337.143 Capsicum annuum HOM05D000566 ORTHO05D008456 1.5e-56 223.4 125 87.2
PGSC0003DMG401022314 Solanum tuberosum HOM05D000566 ORTHO05D008456 1.5e-56 223.4 125 87.2
CARHR028250 Cardamine hirsuta HOM05D000566 ORTHO05D008456 2.0e-56 223.0 200 62.5
AT1G29040 Arabidopsis thaliana HOM05D000566 ORTHO05D008456 2.6e-56 222.6 182 65.9
SGA_v2.0_scaffold1G00030 Striga asiatica HOM05D000566 ORTHO05D008456 2.6e-56 222.6 144 77.1
unitig_699.g19342 Utricularia gibba HOM05D000566 ORTHO05D008456 3.4e-56 222.2 137 79.6
Migut.M01050 Erythranthe guttata HOM05D000566 ORTHO05D008456 4.5e-56 221.9 187 65.8
BcaB03g13911 Brassica carinata HOM05D000566 ORTHO05D008456 5.9e-56 221.5 181 66.9
EL10Ac8g20507 Beta vulgaris HOM05D000566 ORTHO05D008456 7.6e-56 221.1 227 59.9
Thhalv10009067m.g Eutrema salsugineum HOM05D000566 ORTHO05D008456 7.6e-56 221.1 137 77.4
DCAR_004017 Daucus carota HOM05D000566 ORTHO05D008456 1.0e-55 220.7 142 77.5
BcaC06g35392 Brassica carinata HOM05D000566 ORTHO05D008456 1.3e-55 220.3 179 64.8
Carub.0001s2723 Capsella rubella HOM05D000566 ORTHO05D008456 1.3e-55 220.3 141 76.6
C07p16640 Brassica napus HOM05D000566 ORTHO05D008456 2.2e-55 219.5 179 63.7
CDE02G2902 Ceratophyllum demersum HOM05D000566 ORTHO05D008456 3.8e-55 218.8 132 83.3
A07p11000 Brassica napus HOM05D000566 ORTHO05D008456 6.5e-55 218.0 180 62.8
BraA07t28892Z Brassica rapa HOM05D000566 ORTHO05D008456 6.5e-55 218.0 180 62.8
Lj2A297T108 Lonicera japonica HOM05D000566 ORTHO05D008456 6.5e-55 218.0 230 54.8
MBI06_g25985_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 8.4e-55 217.6 206 61.7
Solyc07g064690.1 Solanum lycopersicum HOM05D000566 ORTHO05D008456 8.4e-55 217.6 125 84.8
Zm00001eb162000 Zea mays HOM05D000566 ORTHO05D008456 8.4e-55 217.6 195 61.5
SalBow8G0706 Salvia bowleyana HOM05D000566 ORTHO05D008456 1.4e-54 216.9 181 66.9
Sopen07g032890 Solanum pennellii HOM05D000566 ORTHO05D008456 1.4e-54 216.9 122 86.1
BolC7t42164H Brassica oleracea HOM05D000566 ORTHO05D008456 1.9e-54 216.5 179 63.7
HPP92_024140 Vanilla planifolia HOM05D000566 ORTHO05D008456 1.9e-54 216.5 122 87.7
AL1G42750 Arabidopsis lyrata HOM05D000566 ORTHO05D008456 5.5e-54 214.9 137 75.2
Aa31LG6G11510 Aethionema arabicum HOM05D000566 ORTHO05D008456 3.5e-53 212.2 208 58.7
Pp3c23_18520 Physcomitrium patens HOM05D000566 ORTHO05D008456 3.9e-52 208.8 141 71.6
Os01g0613300 Oryza sativa ssp. japonica HOM05D000566 ORTHO05D008456 2.5e-51 206.1 186 60.8
Nitab4.5_0000206g0050 Nicotiana tabacum HOM05D000566 ORTHO05D008456 7.4e-51 204.5 159 67.3
Pp3c24_14610 Physcomitrium patens HOM05D000566 ORTHO05D008456 7.4e-51 204.5 122 77.0
Peaxi162Scf01070g00226 Petunia axillaris HOM05D000566 ORTHO05D008456 6.3e-50 201.4 210 53.8
Glyma.13G170900 Glycine max HOM05D000566 ORTHO05D008456 2.2e-47 193.0 122 76.2
AUR62031167 Chenopodium quinoa HOM05D000566 ORTHO05D008456 3.8e-47 192.2 99 96.0
ATR0602G168 Amborella trichopoda HOM05D000566 ORTHO05D008456 1.4e-46 190.3 188 60.1
VMungo0251G1536 Vigna mungo HOM05D000566 ORTHO05D008456 6.1e-45 184.9 122 71.3
Glyma.04G136400 Glycine max HOM05D000566 ORTHO05D008456 5.1e-44 181.8 122 71.3
SEGI_28108 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 2.2e-42 176.4 122 67.2
arahy.Tifrunner.gnm1.ann1.441UHN Arachis hypogaea HOM05D000566 ORTHO05D008456 4.8e-42 175.3 122 68.9
arahy.Tifrunner.gnm1.ann1.AZL87G Arachis hypogaea HOM05D000566 ORTHO05D008456 1.1e-41 174.1 122 68.0
Cpa.g.sc7.62 Carica papaya HOM05D000566 ORTHO05D008456 4.1e-41 172.2 110 81.8
AagrBONN_evm.TU.Sc2ySwM_344.3192 Anthoceros agrestis HOM05D000566 ORTHO05D008456 6.5e-39 164.9 106 74.5
CsaV3_6G050800 Cucumis sativus L. HOM05D000566 ORTHO05D008456 5.5e-38 161.8 136 67.6
Nn1g04373 Nelumbo nucifera HOM05D000566 ORTHO05D008456 4.4e-35 152.1 121 71.9
FAN16G3553 Fragaria x ananassa HOM05D000566 ORTHO05D008456 1.9e-30 136.7 150 56.0
TWI38G1453 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 1.9e-30 136.7 134 59.0
Nitab4.5_0010317g0010 Nicotiana tabacum HOM05D000566 ORTHO05D008456 4.4e-27 125.6 81 77.8
MCO02G300 Micromonas commoda HOM05D000566 ORTHO05D008456 9.7e-27 124.4 183 44.3
TWI38G2220 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 1.2e-24 117.5 154 49.4
PRCOL_00004523 Prasinoderma coloniale HOM05D000566 ORTHO05D008456 4.2e-22 109.0 121 47.9
Glyma.04G136500 Glycine max HOM05D000566 ORTHO05D008456 2.8e-18 96.3 71 66.2
SEGI_06418 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 3.5e-16 89.4 115 46.1
CSS0020746 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 1.0e-15 87.8 128 50.0
CSS0029795 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 1.0e-15 87.8 128 50.0
CSS0045665 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 2.9e-15 86.3 45 88.9
SEGI_18524 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 1.9e-14 83.6 42 92.9
Sed0003601 Sechium edule HOM05D000566 ORTHO05D008456 2.1e-13 80.1 114 45.6
Cpa.g.sc7.61 Carica papaya HOM05D000566 ORTHO05D008456 5.2e-12 75.5 37 91.9
SEGI_34869 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 2.7e-08 63.2 42 69.0
MBI06_g25984_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 2.3e-07 60.1 52 61.5


User provided reference genes

Program Settings