Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib192G0147 Durio zibethinus HOM05D007037 ORTHO05D006691 1.9e-37 158.7 81 100.0
Thecc.06G221700 Theobroma cacao HOM05D007037 ORTHO05D006691 6.6e-30 133.7 79 87.3
COL.COLO4_00342 Corchorus olitorius HOM05D007037 ORTHO05D006691 6.8e-27 123.6 77 81.8
Gorai.009G179200 Gossypium raimondii HOM05D007037 ORTHO05D006691 8.9e-27 123.2 78 82.1
Gohir.A05G170900 Gossypium hirsutum HOM05D007037 ORTHO05D006691 3.4e-26 121.3 78 80.8
Gohir.D05G173900 Gossypium hirsutum HOM05D007037 ORTHO05D006691 1.3e-25 119.4 78 79.5
CiPaw.09G092600 Carya illinoinensis HOM05D007037 ORTHO05D006691 6.2e-20 100.5 80 66.2
Manes.16G006400 Manihot esculenta HOM05D007037 ORTHO05D006691 2.3e-19 98.6 79 65.8
QL05p073032 Quercus lobata HOM05D007037 ORTHO05D006691 4.0e-19 97.8 79 67.1
Manes.01G159201 Manihot esculenta HOM05D007037 ORTHO05D006691 1.2e-18 96.3 79 64.6
FAN25G2740 Fragaria x ananassa HOM05D007037 ORTHO05D006691 1.5e-18 95.9 78 60.3
Potri.004G013601 Populus trichocarpa HOM05D007037 ORTHO05D006691 1.5e-18 95.9 75 66.7
Atru.chr10.2236 Acer truncatum HOM05D007037 ORTHO05D006691 3.4e-18 94.7 76 65.8
Oeu025269.1 Olea europaea HOM05D007037 ORTHO05D006691 5.8e-18 94.0 78 64.1
RcHm_v2.0_Chr5g0002881 Rosa chinensis HOM05D007037 ORTHO05D006691 9.8e-18 93.2 79 59.5
MD10G1322200 Malus domestica HOM05D007037 ORTHO05D006691 2.2e-17 92.0 82 57.3
TAR624G1029 Trochodendron aralioides HOM05D007037 ORTHO05D006691 2.9e-17 91.7 85 62.4
Eucgr.E04050 Eucalyptus grandis HOM05D007037 ORTHO05D006691 3.7e-17 91.3 78 57.7
Prupe.4G019700 Prunus persica HOM05D007037 ORTHO05D006691 3.7e-17 91.3 82 58.5
Potri.011G004400 Populus trichocarpa HOM05D007037 ORTHO05D006691 1.4e-16 89.4 76 61.8
FAN21G2981 Fragaria x ananassa HOM05D001191 ORTHO05D000979 1.9e-16 89.0 79 58.2
MD05G1347800 Malus domestica HOM05D007037 ORTHO05D006691 2.4e-16 88.6 80 55.0
Nitab4.5_0000005g0340 Nicotiana tabacum HOM05D007037 ORTHO05D006691 1.6e-15 85.9 79 57.0
Gohir.D11G101450 Gossypium hirsutum HOM05D007037 ORTHO05D006691 3.5e-15 84.7 76 61.8
Gorai.007G108200 Gossypium raimondii HOM05D007037 ORTHO05D006691 3.5e-15 84.7 76 61.8
Nitab4.5_0009030g0010 Nicotiana tabacum HOM05D007037 ORTHO05D006691 3.5e-15 84.7 79 55.7
ECA234G0681 Erigeron canadensis HOM05D007037 ORTHO05D006691 4.6e-15 84.3 77 58.4
Lsat_1_v5_gn_4_60821 Lactuca sativa HOM05D007037 ORTHO05D006691 6.0e-15 84.0 77 58.4
CSS0006945 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 7.8e-15 83.6 80 57.5
Hma1.2p1_0749F.1_g212630 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 7.8e-15 83.6 77 57.1
Hma1.2p1_0749F.1_g212635 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 7.8e-15 83.6 77 57.1
CSS0026389 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 3.9e-14 81.3 81 56.8
Dinv13899 Davidia involucrata HOM05D001191 ORTHO05D000979 6.6e-14 80.5 79 57.0
Gohir.A11G096766 Gossypium hirsutum HOM05D007037 ORTHO05D006691 6.6e-14 80.5 76 59.2
Gohir.D13G171150 Gossypium hirsutum HOM05D007037 ORTHO05D006691 1.9e-13 79.0 76 59.2
Cc09_g01610 Coffea canephora HOM05D007037 ORTHO05D006691 2.5e-13 78.6 77 51.9
DCAR_008156 Daucus carota HOM05D007037 ORTHO05D006691 4.3e-13 77.8 79 51.9
Gorai.013G189700 Gossypium raimondii HOM05D007037 ORTHO05D006691 7.3e-13 77.0 76 57.9
Nitab4.5_0005074g0010 Nicotiana tabacum HOM05D007037 ORTHO05D006691 1.2e-12 76.3 79 55.7
Glyma.17G012900 Glycine max HOM05D007037 ORTHO05D006691 1.6e-12 75.9 79 54.4
Sopen02g011150 Solanum pennellii HOM05D007037 ORTHO05D006691 1.6e-12 75.9 75 53.3
Gohir.D13G171533 Gossypium hirsutum HOM05D007037 ORTHO05D006691 2.1e-12 75.5 78 56.4
Ciclev10018055m.g Citrus clementina HOM05D007037 ORTHO05D006691 2.8e-12 75.1 79 57.0
ClCG01G021940 Citrullus lanatus HOM05D007037 ORTHO05D006691 6.2e-12 73.9 77 54.5
CsaV3_6G049020 Cucumis sativus L. HOM05D007037 ORTHO05D006691 1.1e-11 73.2 77 53.2
Peaxi162Scf00331g00119 Petunia axillaris HOM05D007037 ORTHO05D006691 1.1e-11 73.2 80 51.2
Sed0008683 Sechium edule HOM05D007037 ORTHO05D006691 1.4e-11 72.8 77 51.9
FvH4_3g01970 Fragaria vesca HOM05D007037 ORTHO05D006691 1.8e-11 72.4 79 50.6
Aqoxy1G02111 Aquilegia oxysepala HOM05D007037 ORTHO05D006691 2.3e-11 72.0 72 54.2
Nitab4.5_0002827g0030 Nicotiana tabacum HOM05D007037 ORTHO05D006691 2.3e-11 72.0 79 51.9
Glyma.07G261100 Glycine max HOM05D007037 ORTHO05D006691 8.9e-11 70.1 79 51.9
Sed0010286 Sechium edule HOM05D007037 ORTHO05D006691 8.9e-11 70.1 77 51.9
Phvul.003G079400 Phaseolus vulgaris HOM05D007037 ORTHO05D006691 1.2e-10 69.7 79 51.9
Medtr2g023440 Medicago truncatula HOM05D007037 ORTHO05D006691 1.5e-10 69.3 80 52.5
Ca_26471_v3 Cicer arietinum L. HOM05D007037 ORTHO05D006691 4.4e-10 67.8 86 45.3
Migut.M01325 Erythranthe guttata HOM05D007037 ORTHO05D006691 5.8e-10 67.4 78 50.0
Lj4g0019440 Lotus japonicus HOM05D007037 ORTHO05D006691 5.8e-10 67.4 81 48.1
Sabra04G0006400 Salix brachista HOM05D007037 ORTHO05D006691 7.5e-10 67.0 75 50.7
TPR.G13436 Trifolium pratense HOM05D007037 ORTHO05D006691 9.9e-10 66.6 80 52.5
Glyma.09G004000 Glycine max HOM05D007037 ORTHO05D006691 2.2e-09 65.5 78 48.7
Peaxi162Scf01204g00120 Petunia axillaris HOM05D007037 ORTHO05D006691 3.7e-09 64.7 79 48.1
Sabra11G0003500 Salix brachista HOM05D007037 ORTHO05D006691 3.7e-09 64.7 77 46.8
Thhalv10009555m.g Eutrema salsugineum HOM05D001191 ORTHO05D000979 4.9e-09 64.3 80 51.2
CiPaw.10G071700 Carya illinoinensis HOM05D007037 ORTHO05D006691 6.4e-09 63.9 80 46.2
Psat4g006560 Pisum sativum HOM05D007037 ORTHO05D006691 8.3e-09 63.5 80 43.8
PGSC0003DMG400016450 Solanum tuberosum HOM05D007037 ORTHO05D006691 8.3e-09 63.5 82 46.3
PGSC0003DMG400019869 Solanum tuberosum HOM05D007037 ORTHO05D006691 8.3e-09 63.5 72 48.6
Haze_06807 Corylus avellana HOM05D007037 ORTHO05D006691 1.1e-08 63.2 80 47.5
vmacro23211 Vaccinium macrocarpon HOM05D007037 ORTHO05D006691 1.1e-08 63.2 78 48.7
Lj6g0006723 Lotus japonicus HOM05D007037 ORTHO05D006691 1.9e-08 62.4 79 45.6
BcaC05g25043 Brassica carinata HOM05D001191 ORTHO05D000979 2.4e-08 62.0 77 48.1
SalBow8G3366 Salvia bowleyana HOM05D007037 ORTHO05D006691 2.4e-08 62.0 65 50.8
Sp1g10350 Schrenkiella parvula HOM05D001191 ORTHO05D000979 2.4e-08 62.0 80 48.8
arahy.Tifrunner.gnm1.ann1.98H95S Arachis hypogaea HOM05D007037 ORTHO05D006691 4.1e-08 61.2 87 43.7
Medtr4g132230 Medicago truncatula HOM05D007037 ORTHO05D006691 4.1e-08 61.2 80 42.5
arahy.Tifrunner.gnm1.ann1.CZMF37 Arachis hypogaea HOM05D007037 ORTHO05D006691 5.4e-08 60.8 86 44.2
EL10Ac8g20067 Beta vulgaris HOM05D007037 ORTHO05D006691 5.4e-08 60.8 75 46.7
Cfa000214 Carpinus fangiana HOM05D007037 ORTHO05D006691 5.4e-08 60.8 80 45.0
Ca_21080_v3 Cicer arietinum L. HOM05D007037 ORTHO05D006691 5.4e-08 60.8 80 43.8
Sopen02g025300 Solanum pennellii HOM05D007037 ORTHO05D006691 5.4e-08 60.8 82 45.1
THA.LOC104823525 Tarenaya hassleriana HOM05D007037 ORTHO05D006691 5.4e-08 60.8 81 48.1
Actinidia09718 Actinidia chinensis HOM05D007037 ORTHO05D006691 7.1e-08 60.5 86 44.2
AT1G11740 Arabidopsis thaliana HOM05D001191 ORTHO05D000979 7.1e-08 60.5 76 47.4
A06p08290 Brassica napus HOM05D007037 ORTHO05D006691 7.1e-08 60.5 77 46.8
CARHR012050 Cardamine hirsuta HOM05D007037 ORTHO05D006691 7.1e-08 60.5 76 47.4
C05p09860 Brassica napus HOM05D007037 ORTHO05D006691 1.2e-07 59.7 77 46.8
Aa31LG1G3030 Aethionema arabicum HOM05D007037 ORTHO05D006691 1.6e-07 59.3 79 44.3
AL1G22910 Arabidopsis lyrata HOM05D001191 ORTHO05D000979 1.6e-07 59.3 86 45.3
Hund23465 Selenicereus undatus HOM05D007037 ORTHO05D006691 1.6e-07 59.3 74 48.6
Carub.0001s1138 Capsella rubella HOM05D007037 ORTHO05D006691 2.7e-07 58.5 76 46.1
Zm00001eb048920 Zea mays HOM05D007037 ORTHO05D006691 2.7e-07 58.5 78 46.2
TPR.G37004 Trifolium pratense HOM05D007037 ORTHO05D006691 4.6e-07 57.8 76 43.4
Lalb_Chr13g0304241 Lupinus albus HOM05D007037 ORTHO05D006691 6.0e-07 57.4 77 46.8
Cc05_g04380 Coffea canephora HOM05D007037 ORTHO05D006691 1.3e-06 56.2 82 43.9
Lalb_Chr07g0177181 Lupinus albus HOM05D007037 ORTHO05D006691 1.7e-06 55.8 77 41.6
Potri.014G153900 Populus trichocarpa HOM05D009550 ORTHO05D006691 2.3e-06 55.5 85 45.9
Rhsim13G0153300 Rhododendron simsii HOM05D007037 ORTHO05D006691 3.0e-06 55.1 79 46.8
TAR626G0921 Trochodendron aralioides HOM05D007037 ORTHO05D006691 3.0e-06 55.1 66 56.1


User provided reference genes

Program Settings