Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib192G0135 Durio zibethinus HOM05D007650 ORTHO05D009695 1.5e-159 566.2 306 100.0
Thecc.06G153200 Theobroma cacao HOM05D007650 ORTHO05D009695 1.6e-145 519.6 307 92.5
Gorai.010G238900 Gossypium raimondii HOM05D007650 ORTHO05D009695 2.5e-130 469.2 309 83.8
Gohir.D06G204800 Gossypium hirsutum HOM05D007650 ORTHO05D009695 9.5e-130 467.2 309 83.5
Gohir.A06G197300 Gossypium hirsutum HOM05D007650 ORTHO05D009695 6.1e-129 464.5 309 83.2
COL.COLO4_38298 Corchorus olitorius HOM05D007650 ORTHO05D009695 1.7e-126 456.4 307 83.4
Cfa000966 Carpinus fangiana HOM05D007650 ORTHO05D009695 2.0e-124 449.5 307 81.1
CiPaw.09G126000 Carya illinoinensis HOM05D007650 ORTHO05D009695 2.3e-123 446.0 305 81.0
Haze_05565 Corylus avellana HOM05D007650 ORTHO05D009695 2.9e-123 445.7 307 81.4
Manes.17G068200 Manihot esculenta HOM05D007650 ORTHO05D009695 6.6e-123 444.5 301 81.1
Dinv30717 Davidia involucrata HOM05D007650 ORTHO05D009695 1.1e-122 443.7 307 78.2
TWI09G0653 Tripterygium wilfordii HOM05D007650 ORTHO05D009695 9.5e-122 440.7 304 78.0
RcHm_v2.0_Chr5g0013551 Rosa chinensis HOM05D007650 ORTHO05D009695 4.7e-121 438.3 309 77.7
TAR629G0225 Trochodendron aralioides HOM05D007650 ORTHO05D009695 6.1e-121 438.0 301 78.1
FAN16G2223 Fragaria x ananassa HOM05D007650 ORTHO05D009695 1.0e-120 437.2 309 78.0
Hma1.2p1_0137F.1_g062480 Hydrangea macrophylla HOM05D007650 ORTHO05D009695 1.0e-120 437.2 311 77.8
Actinidia16723 Actinidia chinensis HOM05D007650 ORTHO05D009695 5.2e-120 434.9 311 76.5
MD05G1286900 Malus domestica HOM05D007650 ORTHO05D009695 1.5e-119 433.3 309 77.3
Potri.011G080900 Populus trichocarpa HOM05D007650 ORTHO05D009695 2.6e-119 432.6 307 78.5
FAN21G2668 Fragaria x ananassa HOM05D007650 ORTHO05D009695 3.4e-119 432.2 307 77.9
FvH4_3g05890 Fragaria vesca HOM05D007650 ORTHO05D009695 1.7e-118 429.9 303 78.2
Nn3g20684 Nelumbo nucifera HOM05D007650 ORTHO05D009695 1.7e-118 429.9 305 76.7
Sabra11G0064400 Salix brachista HOM05D007650 ORTHO05D009695 3.7e-118 428.7 314 76.1
QL05p059009 Quercus lobata HOM05D007650 ORTHO05D009695 8.3e-118 427.6 308 77.9
FAN11G2937 Fragaria x ananassa HOM05D007650 ORTHO05D009695 1.4e-117 426.8 303 77.6
Eucgr.D00307 Eucalyptus grandis HOM05D007650 ORTHO05D009695 1.9e-117 426.4 311 76.8
vmacro09097 Vaccinium macrocarpon HOM05D007650 ORTHO05D009695 5.4e-117 424.9 311 75.9
Atru.chr10.1319 Acer truncatum HOM05D007650 ORTHO05D009695 7.0e-117 424.5 314 76.8
Lj4g0007964 Lotus japonicus HOM05D007650 ORTHO05D009695 7.0e-117 424.5 290 81.7
DCAR_005107 Daucus carota HOM05D007650 ORTHO05D009695 1.6e-116 423.3 311 75.2
CANSAT35G2040 Cannabis sativa HOM05D007650 ORTHO05D009695 8.6e-115 417.5 309 75.1
Rhsim13G0193900 Rhododendron simsii HOM05D007650 ORTHO05D009695 4.3e-114 415.2 312 74.0
arahy.Tifrunner.gnm1.ann1.IH3VZP Arachis hypogaea HOM05D007650 ORTHO05D009695 9.5e-114 414.1 295 79.3
Glyma.08G083700 Glycine max HOM05D007650 ORTHO05D009695 9.5e-114 414.1 293 78.5
PGR083G1882 Punica granatum HOM05D007650 ORTHO05D009695 9.5e-114 414.1 306 75.5
Phvul.002G194800 Phaseolus vulgaris HOM05D007650 ORTHO05D009695 1.2e-113 413.7 300 76.0
VMungo0251G1744 Vigna mungo HOM05D007650 ORTHO05D009695 2.8e-113 412.5 295 76.3
Medtr4g094625 Medicago truncatula HOM05D007650 ORTHO05D009695 8.0e-113 411.0 292 78.8
MBI07_g15281_MAGBIO Magnolia biondii HOM05D007650 ORTHO05D009695 1.1e-112 410.6 291 77.3
Glyma.05G129100 Glycine max HOM05D007650 ORTHO05D009695 1.4e-112 410.2 293 77.8
CsaV3_6G051610 Cucumis sativus L. HOM05D007650 ORTHO05D009695 1.8e-112 409.8 293 78.5
Ca_18274_v3 Cicer arietinum L. HOM05D007650 ORTHO05D009695 2.3e-112 409.5 292 79.5
arahy.Tifrunner.gnm1.ann1.HZCZ32 Arachis hypogaea HOM05D007650 ORTHO05D009695 6.8e-112 407.9 310 75.8
Migut.H01373 Erythranthe guttata HOM05D007650 ORTHO05D009695 6.8e-112 407.9 309 73.1
Oeu040111.1 Olea europaea HOM05D007650 ORTHO05D009695 8.9e-112 407.5 305 73.4
CAN.G257.1 Capsicum annuum HOM05D007650 ORTHO05D009695 1.2e-111 407.1 290 77.2
MELO3C007146.2 Cucumis melo HOM05D007650 ORTHO05D009695 1.2e-111 407.1 293 78.2
PGSC0003DMG400008313 Solanum tuberosum HOM05D007650 ORTHO05D009695 1.2e-111 407.1 309 75.1
TPR.G4852 Trifolium pratense HOM05D007650 ORTHO05D009695 1.2e-111 407.1 299 77.6
Lj1A1185T62 Lonicera japonica HOM05D007650 ORTHO05D009695 2.0e-111 406.4 309 74.8
Cc09_g08850 Coffea canephora HOM05D007650 ORTHO05D009695 2.6e-111 406.0 313 73.8
Sopen02g019910 Solanum pennellii HOM05D007650 ORTHO05D009695 7.5e-111 404.4 301 75.7
HanXRQChr17g0565021 Helianthus annuus HOM05D007650 ORTHO05D009695 1.3e-110 403.7 306 74.2
EL10As10g23973 Beta vulgaris HOM05D007650 ORTHO05D009695 4.9e-110 401.7 307 72.6
Psat7g090640 Pisum sativum HOM05D007650 ORTHO05D009695 4.9e-110 401.7 301 74.8
Peaxi162Scf00796g00117 Petunia axillaris HOM05D007650 ORTHO05D009695 6.4e-110 401.4 312 74.0
Lsat_1_v5_gn_4_30200 Lactuca sativa HOM05D007650 ORTHO05D009695 1.1e-109 400.6 307 73.0
Sopen02g019890 Solanum pennellii HOM05D007650 ORTHO05D009695 1.1e-109 400.6 301 75.1
Lalb_Chr07g0188691 Lupinus albus HOM05D007650 ORTHO05D009695 4.1e-109 398.7 290 76.9
Nitab4.5_0001040g0130 Nicotiana tabacum HOM05D007650 ORTHO05D009695 7.0e-109 397.9 306 75.2
Nitab4.5_0001655g0220 Nicotiana tabacum HOM05D007650 ORTHO05D009695 2.7e-108 396.0 306 74.5
CDE02G4320 Ceratophyllum demersum HOM05D007650 ORTHO05D009695 4.6e-108 395.2 289 75.4
SalBow7G1373 Salvia bowleyana HOM05D007650 ORTHO05D009695 6.6e-107 391.3 290 75.5
Hund21519 Selenicereus undatus HOM05D007650 ORTHO05D009695 1.2e-105 387.1 304 70.1
ECA234G0548 Erigeron canadensis HOM05D007650 ORTHO05D009695 4.7e-105 385.2 307 70.4
Sc17g0005010 Simmondsia chinensis HOM05D007650 ORTHO05D009695 1.3e-102 377.1 315 68.3
unitig_21.g20640 Utricularia gibba HOM05D007650 ORTHO05D009695 1.7e-102 376.7 291 72.2
Os05g0565400 Oryza sativa ssp. japonica HOM05D007650 ORTHO05D009695 2.2e-102 376.3 262 76.7
Zm00001eb296000 Zea mays HOM05D007650 ORTHO05D009695 1.1e-101 374.0 242 80.2
ClCG01G024480 Citrullus lanatus HOM05D007650 ORTHO05D009695 6.0e-100 368.2 293 73.7
AUR62030238 Chenopodium quinoa HOM05D007650 ORTHO05D009695 1.7e-99 366.7 307 69.1
Aqoxy4G00120 Aquilegia oxysepala HOM05D007650 ORTHO05D009695 3.0e-99 365.9 302 66.2
HPP92_024569 Vanilla planifolia HOM05D007650 ORTHO05D009695 9.5e-98 360.9 265 73.6
Prupe.4G078000 Prunus persica HOM05D007650 ORTHO05D009695 1.5e-90 337.0 307 63.5
SMO174G0197 Selaginella moellendorffii HOM05D007650 ORTHO05D009695 2.6e-87 326.2 285 61.8
AagrBONN_evm.TU.Sc2ySwM_117.3317 Anthoceros agrestis HOM05D007650 ORTHO05D009695 5.8e-87 325.1 253 68.4
Mapoly0064s0064 Marchantia polymorpha HOM05D007650 ORTHO05D009695 1.1e-85 320.9 298 62.1
AUR62027602 Chenopodium quinoa HOM05D007650 ORTHO05D009695 1.6e-84 317.0 275 66.9
Sed0021228 Sechium edule HOM05D007650 ORTHO05D009695 6.4e-78 295.0 221 74.7
Pp3c2_34550 Physcomitrium patens HOM05D007650 ORTHO05D009695 1.0e-70 271.2 204 70.6
ATR0585G132 Amborella trichopoda HOM05D007650 ORTHO05D009695 6.0e-68 261.9 176 79.5
Solyc02g070800.2 Solanum lycopersicum HOM05D007650 ORTHO05D009695 1.5e-66 257.3 163 84.0
CBR_g31268 Chara braunii HOM05D007650 ORTHO05D009695 9.3e-61 238.0 243 55.6
TAR629G3449 Trochodendron aralioides HOM05D007650 ORTHO05D009695 1.5e-58 230.7 236 58.5
Ah.14g086550 Amaranthus hybridus HOM05D007650 ORTHO05D009695 2.0e-55 220.3 301 50.8
Actinidia19514 Actinidia chinensis HOM05D007650 ORTHO05D009695 1.0e-54 218.0 144 80.6
GSVIVG01021423001 Vitis vinifera HOM05D007650 ORTHO05D009695 2.9e-54 216.5 145 82.1
QL05p059017 Quercus lobata HOM05D007650 ORTHO05D009695 9.4e-53 211.5 193 65.3
Sopen02g019900 Solanum pennellii HOM05D007650 ORTHO05D009695 8.8e-43 178.3 116 83.6
Manes.15G119900 Manihot esculenta HOM05D007650 ORTHO05D009695 5.5e-37 159.1 177 57.6
HanXRQChr09g0241981 Helianthus annuus HOM05D007650 ORTHO05D009695 6.3e-33 145.6 97 79.4
CAN.G637.51 Capsicum annuum HOM05D007650 ORTHO05D009695 3.1e-24 116.7 119 58.8
CAN.G84.7 Capsicum annuum HOM05D007650 ORTHO05D009695 6.5e-22 109.0 130 54.6
TAR629G1582 Trochodendron aralioides HOM05D007650 ORTHO05D009695 2.3e-14 84.0 64 70.3
Zm00001eb089160 Zea mays HOM05D000666 ORTHO05D001431 3.6e-12 76.6 47 80.9


User provided reference genes

Program Settings