Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib187G1570 Durio zibethinus HOM05D000718 ORTHO05D007431 1.3e-268 929.1 458 100.0
Thecc.07G114900 Theobroma cacao HOM05D000718 ORTHO05D007431 2.2e-247 858.6 458 91.7
COL.COLO4_17547 Corchorus olitorius HOM05D000718 ORTHO05D007431 1.3e-244 849.4 473 89.2
Gohir.A01G054400 Gossypium hirsutum HOM05D000718 ORTHO05D007431 3.6e-234 814.7 458 86.9
Gorai.002G054700 Gossypium raimondii HOM05D000718 ORTHO05D007431 3.6e-234 814.7 458 86.7
Gohir.D01G042724 Gossypium hirsutum HOM05D000718 ORTHO05D007431 1.1e-233 813.1 458 86.5
PGR031G2045 Punica granatum HOM05D000718 ORTHO05D007431 1.6e-210 736.1 460 77.6
GSVIVG01014199001 Vitis vinifera HOM05D000718 ORTHO05D007431 1.2e-208 729.9 456 78.3
Eucgr.K01884 Eucalyptus grandis HOM05D000718 ORTHO05D007431 3.4e-208 728.4 455 76.0
Dinv18364 Davidia involucrata HOM05D000718 ORTHO05D007431 9.9e-208 726.9 465 77.8
Haze_09324 Corylus avellana HOM05D000718 ORTHO05D007431 1.9e-206 722.6 469 75.3
Atru.chr2.2147 Acer truncatum HOM05D000718 ORTHO05D007431 4.6e-205 718.0 462 77.1
CiPaw.11G160400 Carya illinoinensis HOM05D000718 ORTHO05D007431 6.0e-205 717.6 462 76.4
THA.LOC104822564 Tarenaya hassleriana HOM05D000718 ORTHO05D007431 2.3e-204 715.7 462 76.4
Prupe.4G164800 Prunus persica HOM05D000718 ORTHO05D007431 8.7e-204 713.8 459 74.5
TWI39G0589 Tripterygium wilfordii HOM05D000718 ORTHO05D007431 1.9e-203 712.6 459 76.3
Rhsim06G0207800 Rhododendron simsii HOM05D000718 ORTHO05D007431 2.5e-203 712.2 460 75.7
MD03G1243500 Malus domestica HOM05D000718 ORTHO05D007431 9.6e-203 710.3 457 74.2
CANSAT35G0289 Cannabis sativa HOM05D000718 ORTHO05D007431 2.1e-202 709.1 460 75.9
Potri.001G390700 Populus trichocarpa HOM05D000718 ORTHO05D007431 2.8e-202 708.8 460 77.4
Lj3g0001987 Lotus japonicus HOM05D000718 ORTHO05D007431 1.4e-201 706.4 462 73.6
Cfa019567 Carpinus fangiana HOM05D000718 ORTHO05D007431 4.0e-201 704.9 440 77.0
FvH4_3g18310 Fragaria vesca HOM05D000718 ORTHO05D007431 4.0e-201 704.9 450 73.8
RcHm_v2.0_Chr5g0030941 Rosa chinensis HOM05D000718 ORTHO05D007431 5.3e-201 704.5 450 74.0
FAN16G1727 Fragaria x ananassa HOM05D000718 ORTHO05D007431 2.9e-199 698.7 459 72.5
FAN25G1161 Fragaria x ananassa HOM05D000718 ORTHO05D007431 6.4e-199 697.6 450 72.9
CARHR089850 Cardamine hirsuta HOM05D000718 ORTHO05D007431 5.5e-198 694.5 461 74.6
Carub.0003s1457 Capsella rubella HOM05D000718 ORTHO05D007431 7.1e-198 694.1 461 74.4
AL3G27230 Arabidopsis lyrata HOM05D000718 ORTHO05D007431 1.6e-197 693.0 461 74.4
AT3G14910 Arabidopsis thaliana HOM05D000718 ORTHO05D007431 2.1e-197 692.6 461 74.4
Thhalv10020708m.g Eutrema salsugineum HOM05D000718 ORTHO05D007431 7.9e-197 690.6 461 74.6
Lj1A829G32 Lonicera japonica HOM05D000718 ORTHO05D007431 7.9e-197 690.6 458 73.6
Ca_12194_v3 Cicer arietinum L. HOM05D000718 ORTHO05D007431 1.0e-196 690.3 462 71.4
FAN11G0057 Fragaria x ananassa HOM05D000718 ORTHO05D007431 1.3e-196 689.9 450 73.1
Lalb_Chr01g0006831 Lupinus albus HOM05D000718 ORTHO05D007431 3.0e-196 688.7 455 73.6
Actinidia12577 Actinidia chinensis HOM05D000718 ORTHO05D007431 3.9e-196 688.3 459 74.1
BolC5t33913H Brassica oleracea HOM05D000718 ORTHO05D007431 2.1e-194 682.6 461 74.2
QL08p026242 Quercus lobata HOM05D000718 ORTHO05D007431 2.1e-194 682.6 472 72.7
arahy.Tifrunner.gnm1.ann1.6IHZ0U Arachis hypogaea HOM05D000718 ORTHO05D007431 2.8e-194 682.2 464 71.3
Glyma.12G157600 Glycine max HOM05D000718 ORTHO05D007431 4.8e-194 681.4 462 71.6
Aa31LG8G2120 Aethionema arabicum HOM05D000718 ORTHO05D007431 8.1e-194 680.6 455 74.3
Nitab4.5_0003565g0040 Nicotiana tabacum HOM05D000718 ORTHO05D007431 2.4e-193 679.1 454 72.9
ClCG11G017460 Citrullus lanatus HOM05D000718 ORTHO05D007431 4.0e-193 678.3 449 73.3
Lalb_Chr03g0031171 Lupinus albus HOM05D000718 ORTHO05D007431 5.3e-193 677.9 458 71.4
Nitab4.5_0006953g0050 Nicotiana tabacum HOM05D000718 ORTHO05D007431 6.9e-193 677.6 463 72.1
arahy.Tifrunner.gnm1.ann1.STN4DM Arachis hypogaea HOM05D000718 ORTHO05D007431 9.0e-193 677.2 459 71.7
BcaB06g25332 Brassica carinata HOM05D000718 ORTHO05D007431 9.0e-193 677.2 452 74.1
MELO3C025639.2 Cucumis melo HOM05D000718 ORTHO05D007431 9.0e-193 677.2 451 73.4
Psat0s1037g0040 Pisum sativum HOM05D000718 ORTHO05D007431 1.5e-192 676.4 463 70.8
Sed0007644 Sechium edule HOM05D000718 ORTHO05D007431 1.5e-192 676.4 459 70.8
A05p34500 Brassica napus HOM05D000718 ORTHO05D007431 3.4e-192 675.2 455 73.8
BraA05t22270Z Brassica rapa HOM05D000718 ORTHO05D007431 3.4e-192 675.2 455 73.8
Peaxi162Scf00111g01475 Petunia axillaris HOM05D000718 ORTHO05D007431 3.4e-192 675.2 461 72.0
PGSC0003DMG400007071 Solanum tuberosum HOM05D000718 ORTHO05D007431 7.6e-192 674.1 463 71.3
TPR.G16488 Trifolium pratense HOM05D000718 ORTHO05D007431 1.0e-191 673.7 463 70.2
Solyc07g062450.3 Solanum lycopersicum HOM05D000718 ORTHO05D007431 2.2e-191 672.5 463 71.1
Sopen07g030690 Solanum pennellii HOM05D000718 ORTHO05D007431 6.5e-191 671.0 463 71.1
vmacro23465 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 2.5e-190 669.1 479 70.8
Phvul.011G162200 Phaseolus vulgaris HOM05D000718 ORTHO05D007431 3.2e-190 668.7 465 70.8
Ah.04g164270 Amaranthus hybridus HOM05D000718 ORTHO05D007431 5.5e-190 667.9 457 72.4
Cc05_g11090 Coffea canephora HOM05D000718 ORTHO05D007431 3.5e-189 665.2 463 71.7
Glyma.06G228900 Glycine max HOM05D000718 ORTHO05D007431 6.0e-189 664.5 463 70.2
CAN.G375.14 Capsicum annuum HOM05D000718 ORTHO05D007431 1.3e-188 663.3 463 70.0
EL10Ac4g08344 Beta vulgaris HOM05D000718 ORTHO05D007431 2.3e-188 662.5 463 70.6
Nn1g04439 Nelumbo nucifera HOM05D000718 ORTHO05D007431 3.3e-187 658.7 429 76.9
Migut.H01998 Erythranthe guttata HOM05D000718 ORTHO05D007431 2.1e-186 656.0 472 70.3
Medtr8g464030 Medicago truncatula HOM05D000718 ORTHO05D007431 2.8e-186 655.6 502 65.1
AUR62042779 Chenopodium quinoa HOM05D000718 ORTHO05D007431 6.3e-186 654.4 477 69.2
Oeu025333.1 Olea europaea HOM05D000718 ORTHO05D007431 2.4e-185 652.5 465 71.0
DCAR_013156 Daucus carota HOM05D000718 ORTHO05D007431 5.3e-185 651.4 461 71.6
PSO782G3001 Papaver somniferum HOM05D000718 ORTHO05D007431 6.9e-185 651.0 466 69.5
Hund02254 Selenicereus undatus HOM05D000718 ORTHO05D007431 1.2e-184 650.2 458 71.0
PSO478G1672 Papaver somniferum HOM05D000718 ORTHO05D007431 2.9e-183 645.6 466 68.9
SalBow7G4178 Salvia bowleyana HOM05D000718 ORTHO05D007431 3.8e-183 645.2 469 69.3
SalBow7G4376 Salvia bowleyana HOM05D000718 ORTHO05D007431 5.0e-183 644.8 469 69.3
MBI07_g09566_MAGBIO Magnolia biondii HOM05D000718 ORTHO05D007431 9.3e-182 640.6 512 62.7
Aqoxy4G00321 Aquilegia oxysepala HOM05D000718 ORTHO05D007431 2.1e-181 639.4 464 69.2
CSS0021542 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 6.1e-181 637.9 445 73.3
C05p52240 Brassica napus HOM05D000718 ORTHO05D007431 3.9e-180 635.2 431 73.5
Nn1g09174 Nelumbo nucifera HOM05D000718 ORTHO05D007431 5.1e-180 634.8 464 70.5
HanXRQChr15g0476211 Helianthus annuus HOM05D000718 ORTHO05D007431 6.7e-180 634.4 462 69.5
SGA_v2.0_scaffold130G34293 Striga asiatica HOM05D000718 ORTHO05D007431 9.7e-179 630.6 459 69.7
Lsat_1_v5_gn_9_99900 Lactuca sativa HOM05D000718 ORTHO05D007431 3.7e-178 628.6 454 69.2
Manes.03G101200 Manihot esculenta HOM05D000718 ORTHO05D007431 7.7e-176 620.9 402 76.6
ECA240G1747 Erigeron canadensis HOM05D000718 ORTHO05D007431 1.1e-174 617.1 459 66.2
CDE04G1093 Ceratophyllum demersum HOM05D000718 ORTHO05D007431 1.1e-171 607.1 458 64.4
FAN21G3716 Fragaria x ananassa HOM05D000718 ORTHO05D007431 2.2e-170 602.8 393 72.5
ATR0602G196 Amborella trichopoda HOM05D000718 ORTHO05D007431 1.5e-168 596.7 454 66.3
CSS0043856 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 2.0e-163 579.7 463 64.6
CSS0014195 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 8.2e-162 574.3 458 66.4
VMungo1127G0879 Vigna mungo HOM05D000718 ORTHO05D007431 1.4e-161 573.5 414 69.1
vmacro11939 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 2.4e-161 572.8 474 63.9
AUR62019575 Chenopodium quinoa HOM05D000718 ORTHO05D007431 2.7e-157 559.3 429 66.4
unitig_52.g17395 Utricularia gibba HOM05D000718 ORTHO05D007431 3.2e-150 535.8 463 60.7
HPP92_023429 Vanilla planifolia HOM05D000718 ORTHO05D007431 2.3e-148 529.6 463 59.6
Ciclev10021305m.g Citrus clementina HOM05D000718 ORTHO05D007431 2.6e-147 526.2 310 83.5
Os09g0315800 Oryza sativa ssp. japonica HOM05D000718 ORTHO05D007431 5.9e-144 515.0 474 57.6
SEGI_16322 Sequoiadendron giganteum HOM05D000718 ORTHO05D007431 1.3e-138 497.3 448 55.6
Zm00001eb309730 Zea mays HOM05D000718 ORTHO05D007431 3.0e-127 459.5 341 64.8
Sc16g0007570 Simmondsia chinensis HOM05D000718 ORTHO05D007431 1.1e-124 451.1 299 75.6
unitig_26.g9517 Utricularia gibba HOM05D005139 ORTHO05D006125 4.9e-122 442.2 415 58.1
MD11G1263600 Malus domestica HOM05D000718 ORTHO05D007431 1.1e-121 441.0 281 74.7
Thecc.07G114700 Theobroma cacao HOM05D000718 ORTHO05D007431 3.0e-119 433.0 378 63.0
CsaV3_4G033110 Cucumis sativus L. HOM05D000718 ORTHO05D007431 7.8e-112 408.3 295 67.5
vmacro11937 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 1.7e-111 407.1 333 65.2
AagrBONN_evm.TU.Sc2ySwM_228.1801 Anthoceros agrestis HOM05D000718 ORTHO05D007431 5.4e-105 385.6 455 44.8
vmacro23384 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 5.1e-103 379.0 347 59.1
SHI27609 Sapria himalayana HOM05D000718 ORTHO05D007431 1.5e-99 367.5 404 50.2
Pp3c4_25540 Physcomitrium patens HOM05D000718 ORTHO05D007431 3.0e-95 353.2 467 41.8
SMO367G0522 Selaginella moellendorffii HOM05D000718 ORTHO05D007431 3.0e-95 353.2 463 45.4
BcaB06g29518 Brassica carinata HOM05D000718 ORTHO05D002712 2.1e-93 347.1 456 47.6
Mapoly0061s0004 Marchantia polymorpha HOM05D000718 ORTHO05D007431 9.3e-89 331.6 458 41.0
Sp3g13120 Schrenkiella parvula HOM05D000718 ORTHO05D007431 2.7e-88 330.1 228 68.0
vmacro11938 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 1.4e-84 317.8 308 56.8
Psat4g090840 Pisum sativum HOM05D000718 ORTHO05D007431 1.9e-81 307.4 246 66.3
Thecc.07G115900 Theobroma cacao HOM05D000718 ORTHO05D007431 6.9e-76 288.9 164 86.0
MSTRG.14233 Avicennia marina HOM05D000718 ORTHO05D007431 3.1e-68 263.5 236 58.9
Psat3g077000 Pisum sativum HOM05D000718 ORTHO05D007431 2.2e-66 257.3 257 50.6
Thecc.07G115200 Theobroma cacao HOM05D000718 ORTHO05D007431 1.2e-56 224.9 126 87.3
Sc16g0007580 Simmondsia chinensis HOM05D000718 ORTHO05D007431 3.3e-54 216.9 167 62.3
Hund02252 Selenicereus undatus HOM05D000718 ORTHO05D007431 2.8e-45 187.2 161 65.2
Cpa.g.sc77.7 Carica papaya HOM05D000718 ORTHO05D007431 3.0e-39 167.2 113 69.9
PGSC0003DMG400011947 Solanum tuberosum HOM05D000718 ORTHO05D007431 6.3e-37 159.5 123 63.4
MD11G1263700 Malus domestica HOM05D000718 ORTHO05D007431 1.2e-35 155.2 125 59.2
Thecc.07G114000 Theobroma cacao HOM05D000718 ORTHO05D007431 2.1e-32 144.4 100 74.0
TAR627G0847 Trochodendron aralioides HOM05D000718 ORTHO05D007431 1.0e-31 142.1 131 56.5
Psat2g113040 Pisum sativum HOM05D000718 ORTHO05D004709 9.8e-30 135.6 102 69.6
CBR_g49411 Chara braunii HOM05D000019 ORTHO05D000353 2.8e-24 117.5 360 27.5
CAN.G713.20 Capsicum annuum HOM05D000718 ORTHO05D007431 6.3e-21 106.3 85 58.8
Thecc.07G113800 Theobroma cacao HOM05D000718 ORTHO05D007431 1.4e-20 105.1 177 41.2
Thecc.07G114100 Theobroma cacao HOM05D000718 ORTHO05D007431 1.2e-19 102.1 52 96.2
Lsat_1_v5_gn_9_99920 Lactuca sativa HOM05D000718 ORTHO05D007431 1.6e-08 65.1 54 63.0


User provided reference genes

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