Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib187G1454 Durio zibethinus HOM05D005213 ORTHO05D006229 1.0e-224 783.1 408 100.0
Thecc.09G066400 Theobroma cacao HOM05D005213 ORTHO05D006229 1.2e-169 600.1 416 79.6
Gorai.009G039700 Gossypium raimondii HOM05D005213 ORTHO05D006229 7.1e-157 557.8 424 75.0
Gohir.D05G039200 Gossypium hirsutum HOM05D005213 ORTHO05D006229 1.0e-155 553.9 425 74.4
Duzib150G1003 Durio zibethinus HOM05D005213 ORTHO05D006229 1.1e-146 523.9 372 75.8
Duzib168G1397 Durio zibethinus HOM05D005213 ORTHO05D006229 2.6e-143 512.7 410 68.5
Ciclev10008490m.g Citrus clementina HOM05D005213 ORTHO05D006229 1.3e-142 510.4 418 68.4
COL.COLO4_21169 Corchorus olitorius HOM05D005213 ORTHO05D006229 8.7e-139 497.7 436 69.7
Cpa.g.sc82.19 Carica papaya HOM05D005213 ORTHO05D006229 5.8e-135 485.0 398 68.3
Potri.006G217900 Populus trichocarpa HOM05D005213 ORTHO05D006229 1.9e-133 479.9 425 64.9
TWI34G0479 Tripterygium wilfordii HOM05D005213 ORTHO05D006229 2.1e-132 476.5 412 63.6
Manes.16G087800 Manihot esculenta HOM05D005213 ORTHO05D006229 3.0e-131 472.6 421 66.0
TAR624G0676 Trochodendron aralioides HOM05D005213 ORTHO05D006229 3.1e-128 462.6 411 64.5
Prupe.1G401300 Prunus persica HOM05D005213 ORTHO05D006229 2.0e-122 443.4 426 64.3
Gorai.010G094100 Gossypium raimondii HOM05D005213 ORTHO05D006229 3.1e-120 436.0 416 62.0
Gohir.D06G080700 Gossypium hirsutum HOM05D005213 ORTHO05D006229 4.5e-119 432.2 416 61.5
Cfa023359 Carpinus fangiana HOM05D005213 ORTHO05D006229 5.9e-119 431.8 427 62.8
CiPaw.16G068600 Carya illinoinensis HOM05D005213 ORTHO05D006229 8.5e-118 427.9 432 63.7
Haze_13552 Corylus avellana HOM05D005213 ORTHO05D006229 5.1e-115 418.7 427 62.3
Cc08_g07800 Coffea canephora HOM05D005213 ORTHO05D006229 1.5e-114 417.2 410 60.7
Gohir.A06G081000 Gossypium hirsutum HOM05D005213 ORTHO05D006229 3.3e-114 416.0 416 60.6
TWI32G0481 Tripterygium wilfordii HOM05D005213 ORTHO05D006229 9.1e-112 407.9 411 57.9
Eucgr.C00749 Eucalyptus grandis HOM05D005213 ORTHO05D006229 1.3e-110 404.1 425 60.0
Manes.03G055700 Manihot esculenta HOM05D005213 ORTHO05D006229 1.3e-110 404.1 393 60.6
MD15G1047100 Malus domestica HOM05D005213 ORTHO05D006229 1.4e-107 394.0 424 58.5
RcHm_v2.0_Chr6g0304741 Rosa chinensis HOM05D005213 ORTHO05D006229 1.8e-104 383.6 433 59.6
Dinv41845 Davidia involucrata HOM05D005213 ORTHO05D006229 1.0e-102 377.9 457 59.3
Nn8g38551 Nelumbo nucifera HOM05D005213 ORTHO05D006229 8.5e-102 374.8 437 56.1
MD08G1046900 Malus domestica HOM05D005213 ORTHO05D006229 1.5e-101 374.0 437 57.0
FvH4_2g37040 Fragaria vesca HOM05D005213 ORTHO05D006229 1.6e-100 370.5 434 58.3
FAN27G3126 Fragaria x ananassa HOM05D005213 ORTHO05D006229 3.0e-99 366.3 434 57.8
FAN15G1397 Fragaria x ananassa HOM05D005213 ORTHO05D006229 4.0e-99 365.9 436 57.3
FAN20G0215 Fragaria x ananassa HOM05D005213 ORTHO05D006229 2.8e-97 359.8 434 57.1
MBI19_g18107_MAGBIO Magnolia biondii HOM05D004195 ORTHO05D005309 2.0e-95 353.6 427 55.0
Ca_15799_v3 Cicer arietinum L. HOM05D005213 ORTHO05D006229 3.5e-95 352.8 416 56.2
Glyma.04G057900 Glycine max HOM05D005213 ORTHO05D006229 5.9e-95 352.1 409 56.2
Migut.A00332 Erythranthe guttata HOM05D005213 ORTHO05D006229 1.3e-94 350.9 433 51.3
Peaxi162Scf00922g00016 Petunia axillaris HOM05D005213 ORTHO05D006229 1.2e-92 344.4 425 52.9
Glyma.06G058600 Glycine max HOM05D005213 ORTHO05D006229 7.5e-90 335.1 408 55.1
GSVIVG01035506001 Vitis vinifera HOM05D005213 ORTHO05D006229 2.2e-89 333.6 398 52.5
Phvul.009G084600 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 3.3e-85 319.7 405 55.3
VMungo1309G2063 Vigna mungo HOM05D005213 ORTHO05D006229 5.5e-85 318.9 390 55.1
DCAR_001248 Daucus carota HOM05D005213 ORTHO05D006229 3.6e-84 316.2 427 49.2
Medtr3g105580 Medicago truncatula HOM05D005213 ORTHO05D006229 6.8e-83 312.0 388 53.6
Nitab4.5_0000508g0090 Nicotiana tabacum HOM05D005213 ORTHO05D006229 1.5e-82 310.8 408 51.5
Lj1g0011388 Lotus japonicus HOM05D005213 ORTHO05D006229 4.4e-82 309.3 411 53.5
CAN.G1059.3 Capsicum annuum HOM05D005213 ORTHO05D006229 2.2e-81 307.0 421 48.0
Nn6g35650 Nelumbo nucifera HOM05D005213 ORTHO05D006229 1.4e-80 304.3 422 51.9
TPR.G21422 Trifolium pratense HOM05D005213 ORTHO05D006229 4.5e-79 299.3 396 52.5
Aqoxy7G04081 Aquilegia oxysepala HOM05D005213 ORTHO05D006229 5.9e-79 298.9 424 50.0
Nitab4.5_0007212g0010 Nicotiana tabacum HOM05D005213 ORTHO05D006229 3.3e-77 293.1 409 49.1
Lalb_Chr11g0063421 Lupinus albus HOM05D005213 ORTHO05D006229 8.9e-75 285.0 378 52.9
CSS0041342 Camellia sinensis var. sinensis HOM05D005213 ORTHO05D006229 1.3e-73 281.2 456 47.1
Haze_18367 Corylus avellana HOM05D005213 ORTHO05D006229 1.7e-73 280.8 413 47.7
Oeu020105.1 Olea europaea HOM05D005213 ORTHO05D006229 1.0e-70 271.6 401 45.9
Rhsim04G0156600 Rhododendron simsii HOM05D005213 ORTHO05D006229 1.0e-70 271.6 423 47.5
Cfa017841 Carpinus fangiana HOM05D005213 ORTHO05D006229 1.3e-70 271.2 368 49.7
Psat5g033280 Pisum sativum HOM05D005213 ORTHO05D006229 2.5e-69 266.9 393 49.1
PSO386G0069 Papaver somniferum HOM05D005213 ORTHO05D006229 5.6e-69 265.8 479 46.3
Lj7P206T8 Lonicera japonica HOM05D005213 ORTHO05D006229 3.1e-67 260.0 311 52.7
Oeu022129.1 Olea europaea HOM05D005213 ORTHO05D006229 4.9e-65 252.7 301 48.5
SGA_v2.0_scaffold22G09922 Striga asiatica HOM05D005213 ORTHO05D006229 4.9e-65 252.7 387 43.7
Gohir.A05G037666 Gossypium hirsutum HOM05D005213 ORTHO05D006229 8.3e-65 251.9 162 79.0
HanXRQChr08g0228011 Helianthus annuus HOM05D005213 ORTHO05D006229 3.0e-62 243.4 410 43.7
PGR142G1942 Punica granatum HOM05D005213 ORTHO05D006229 3.0e-62 243.4 441 45.8
ATR0681G043 Amborella trichopoda HOM05D005213 ORTHO05D006229 4.3e-61 239.6 459 41.0
Hund02523 Selenicereus undatus HOM05D005213 ORTHO05D006229 4.3e-61 239.6 351 44.7
Lalb_Chr22g0349651 Lupinus albus HOM05D005213 ORTHO05D006229 1.2e-60 238.0 401 46.9
TPR.G38861 Trifolium pratense HOM05D005213 ORTHO05D006229 8.9e-59 231.9 383 46.7
EL10Ac5g11257 Beta vulgaris HOM05D005213 ORTHO05D006229 1.5e-58 231.1 422 42.2
HanXRQChr03g0067421 Helianthus annuus HOM05D005213 ORTHO05D006229 2.2e-57 227.3 404 46.3
CDE05G3316 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 4.9e-57 226.1 432 38.0
MSTRG.11768 Avicennia marina HOM05D005213 ORTHO05D006229 1.4e-56 224.6 300 49.0
PSO223G0037 Papaver somniferum HOM05D005213 ORTHO05D006229 2.7e-55 220.3 476 41.4
ECA240G0440 Erigeron canadensis HOM05D005213 ORTHO05D006229 2.5e-53 213.8 412 40.5
Medtr1g014750 Medicago truncatula HOM05D005213 ORTHO05D006229 4.7e-52 209.5 352 48.3
Solyc08g067270.3 Solanum lycopersicum HOM05D005213 ORTHO05D006229 4.0e-51 206.5 228 53.5
vmacro08659 Vaccinium macrocarpon HOM05D005213 ORTHO05D006229 3.4e-50 203.4 356 46.9
CsaV3_6G031800 Cucumis sativus L. HOM05D005213 ORTHO05D006229 8.4e-49 198.7 410 36.1
THA.LOC104810950 Tarenaya hassleriana HOM05D005213 ORTHO05D006229 1.1e-48 198.4 396 40.2
ECA234G4818 Erigeron canadensis HOM05D005213 ORTHO05D006229 7.1e-48 195.7 391 40.7
AUR62032196 Chenopodium quinoa HOM05D005213 ORTHO05D006229 3.5e-47 193.4 408 37.0
ClCG08G009670 Citrullus lanatus HOM05D005213 ORTHO05D006229 4.6e-47 193.0 376 41.0
CANSAT25G2504 Cannabis sativa HOM05D005213 ORTHO05D006229 2.5e-45 187.2 397 42.1
HanXRQChr10g0309951 Helianthus annuus HOM05D005213 ORTHO05D006229 1.1e-43 181.8 405 39.3
Oeu030214.1 Olea europaea HOM05D005213 ORTHO05D006229 1.2e-42 178.3 380 39.5
Ca_13089_v3 Cicer arietinum L. HOM05D005213 ORTHO05D006229 3.2e-40 170.2 268 45.1
Zm00001eb019450 Zea mays HOM05D005213 ORTHO05D006229 1.6e-39 167.9 445 34.4
Hma1.2p1_0920F.1_g236590 Hydrangea macrophylla HOM05D005213 ORTHO05D006229 2.1e-39 167.5 424 38.7
Atru.chr7.1814 Acer truncatum HOM05D005213 ORTHO05D006229 4.6e-39 166.4 132 75.0
CDE05G3450 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 5.1e-38 162.9 401 32.9
Sopen08g021200 Solanum pennellii HOM05D005213 ORTHO05D006229 1.1e-37 161.8 114 64.9
Sed0001538 Sechium edule HOM05D005213 ORTHO05D006229 3.3e-37 160.2 367 36.8
MELO3C026560.2 Cucumis melo HOM05D005213 ORTHO05D006229 8.1e-36 155.6 377 32.9
AUR62036963 Chenopodium quinoa HOM05D005213 ORTHO05D006229 1.2e-34 151.8 406 33.5
Sc10g0009530 Simmondsia chinensis HOM05D005213 ORTHO05D006229 1.2e-34 151.8 389 32.4
SalBow8G0306 Salvia bowleyana HOM05D005213 ORTHO05D006229 2.2e-33 147.5 401 33.9
HPP92_002168 Vanilla planifolia HOM05D006173 ORTHO05D007685 1.6e-31 141.4 302 40.7
Actinidia26432 Actinidia chinensis HOM05D005213 ORTHO05D006229 1.0e-30 138.7 179 49.2
unitig_32.g10930 Utricularia gibba HOM05D005213 ORTHO05D006229 1.0e-30 138.7 312 35.3
Psat6g023400 Pisum sativum HOM05D005213 ORTHO05D006229 2.5e-29 134.0 353 39.1
AT5G21280 Arabidopsis thaliana HOM05D005213 ORTHO05D006229 1.4e-27 128.3 405 34.6
BNapus_Darmor_BZH_scaffold_38p00940 Brassica napus HOM05D005213 ORTHO05D006229 1.4e-27 128.3 401 34.7
BraA02t05631Z Brassica rapa HOM05D005213 ORTHO05D006229 1.4e-27 128.3 401 34.7
Actinidia27819 Actinidia chinensis HOM05D005213 ORTHO05D006229 2.4e-27 127.5 142 62.0
BcaC03g13850 Brassica carinata HOM05D005213 ORTHO05D006229 6.9e-27 125.9 345 35.1
BolC2t07127H Brassica oleracea HOM05D005213 ORTHO05D006229 6.9e-27 125.9 345 35.1
C03p12080 Brassica napus HOM05D005213 ORTHO05D006229 4.5e-26 123.2 341 33.1
Phvul.001G044200 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 5.8e-26 122.9 291 36.4
BcaC01g06616 Brassica carinata HOM05D005213 ORTHO05D006229 7.6e-26 122.5 341 33.1
BolC3t13679H Brassica oleracea HOM05D005213 ORTHO05D006229 7.6e-26 122.5 341 33.1
Phvul.001G044400 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 2.9e-25 120.6 371 32.3
BraA03t10361Z Brassica rapa HOM05D005213 ORTHO05D006229 5.5e-24 116.3 325 34.8
BraA10t43954Z Brassica rapa HOM05D005213 ORTHO05D006229 1.6e-23 114.8 342 33.0
A03p10500 Brassica napus HOM05D005213 ORTHO05D006229 2.1e-23 114.4 340 32.6
BcaB05g22758 Brassica carinata HOM05D005213 ORTHO05D006229 2.7e-23 114.0 342 33.9
CDE11G0900 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 2.7e-23 114.0 316 37.0
Lalb_Chr08g0244621 Lupinus albus HOM05D005213 ORTHO05D006229 6.0e-23 112.8 110 51.8
A10p18740 Brassica napus HOM05D005213 ORTHO05D006229 7.9e-23 112.5 342 32.7
CARHR191550 Cardamine hirsuta HOM05D005213 ORTHO05D006229 3.0e-22 110.5 398 33.2
C09p54690 Brassica napus HOM05D005213 ORTHO05D006229 6.7e-22 109.4 344 32.6
BolC9t58333H Brassica oleracea HOM05D005213 ORTHO05D006229 6.7e-22 109.4 344 32.6
AL6G32940 Arabidopsis lyrata HOM05D005213 ORTHO05D006229 1.9e-21 107.8 398 32.2
Carub.0006s1962 Capsella rubella HOM05D005213 ORTHO05D006229 2.5e-21 107.5 398 33.7
BcaC04g19528 Brassica carinata HOM05D005213 ORTHO05D006229 3.3e-21 107.1 343 32.4
VMungo0477G0001 Vigna mungo HOM05D005213 ORTHO05D006229 3.7e-20 103.6 455 26.6
BcaB08g36461 Brassica carinata HOM05D005213 ORTHO05D006229 4.8e-20 103.2 410 31.2
ECA236G4272 Erigeron canadensis HOM05D005213 ORTHO05D006229 8.2e-20 102.4 309 34.0
Thhalv10014216m.g Eutrema salsugineum HOM05D005213 ORTHO05D006229 1.1e-19 102.1 399 31.1
arahy.Tifrunner.gnm1.ann1.698XEU Arachis hypogaea HOM05D005213 ORTHO05D006229 4.1e-19 100.1 329 32.8
SGA_v2.0_scaffold4G02181 Striga asiatica HOM05D005213 ORTHO05D006229 4.1e-19 100.1 410 27.8
HPP92_013274 Vanilla planifolia HOM05D005213 ORTHO05D006229 6.9e-19 99.4 319 28.8
arahy.Tifrunner.gnm1.ann1.3D63PE Arachis hypogaea HOM05D005213 ORTHO05D006229 5.8e-18 96.3 328 32.0
BcaB01g04752 Brassica carinata HOM05D005213 ORTHO05D006229 1.3e-17 95.1 298 33.6
CsaV3_4G036220 Cucumis sativus L. HOM05D005213 ORTHO05D006229 2.2e-17 94.4 335 32.8
SEGI_40729 Sequoiadendron giganteum HOM05D005213 ORTHO05D006229 2.2e-17 94.4 438 28.3
MELO3C016931.2 Cucumis melo HOM05D005213 ORTHO05D006229 6.5e-17 92.8 337 31.8
Aa31LG1G13440 Aethionema arabicum HOM05D005213 ORTHO05D006229 1.1e-16 92.0 320 32.2
ClCG05G015950 Citrullus lanatus HOM05D005213 ORTHO05D006229 1.1e-16 92.0 316 32.0
Phvul.001G044300 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 5.5e-16 89.7 187 40.6
unitig_747.g21889 Utricularia gibba HOM05D005213 ORTHO05D006229 1.2e-15 88.6 371 28.6
Migut.E01467 Erythranthe guttata HOM05D005213 ORTHO05D006229 1.8e-14 84.7 409 27.6
Sp6g23210 Schrenkiella parvula HOM05D005213 ORTHO05D006229 1.1e-13 82.0 112 53.6
HanXRQChr09g0261901 Helianthus annuus HOM05D005213 ORTHO05D006229 3.3e-13 80.5 315 28.3
BraA03t10362Z Brassica rapa HOM05D005213 ORTHO05D006229 1.5e-10 71.6 45 86.7
HPP92_004172 Vanilla planifolia HOM05D001722 ORTHO05D001910 5.0e-09 66.6 102 39.2
Zm00001eb109280 Zea mays HOM05D005213 ORTHO05D006229 1.8e-06 58.2 329 27.1


User provided reference genes

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