Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib187G1036 Durio zibethinus HOM05D005517 ORTHO05D006760 1.9e-28 128.6 72 100.0
Duzib264G0094 Durio zibethinus HOM05D005517 ORTHO05D006760 6.7e-26 120.2 72 93.1
Thecc.04G039500 Theobroma cacao HOM05D005517 ORTHO05D006760 6.7e-26 120.2 72 93.1
COL.COLO4_13282 Corchorus olitorius HOM05D005517 ORTHO05D006760 1.1e-25 119.4 72 91.7
Gohir.D04G075800 Gossypium hirsutum HOM05D005517 ORTHO05D006760 4.3e-25 117.5 72 88.9
Gohir.A07G229900 Gossypium hirsutum HOM05D005517 ORTHO05D006760 9.6e-25 116.3 69 92.8
Gohir.D07G237100 Gossypium hirsutum HOM05D005517 ORTHO05D006760 9.6e-25 116.3 69 92.8
Gorai.001G273000 Gossypium raimondii HOM05D005517 ORTHO05D006760 9.6e-25 116.3 69 92.8
THA.LOC104803813 Tarenaya hassleriana HOM05D005517 ORTHO05D006760 9.6e-25 116.3 76 85.5
Duzib147G1371 Durio zibethinus HOM05D005517 ORTHO05D006760 1.6e-24 115.5 72 91.7
Cpa.g.sc70.124 Carica papaya HOM05D005517 ORTHO05D006760 3.1e-23 111.3 69 88.4
CARHR199240 Cardamine hirsuta HOM05D005517 ORTHO05D006760 1.2e-22 109.4 76 81.6
Glyma.19G093900 Glycine max HOM05D005517 ORTHO05D006760 2.6e-22 108.2 69 82.6
Phvul.001G091300 Phaseolus vulgaris HOM05D005517 ORTHO05D006760 3.4e-22 107.8 69 79.7
BcaB01g06344 Brassica carinata HOM05D005517 ORTHO05D006760 7.6e-22 106.7 76 78.9
CiPaw.03G057500 Carya illinoinensis HOM05D005517 ORTHO05D006760 7.6e-22 106.7 69 84.1
Ciclev10017370m.g Citrus clementina HOM05D005517 ORTHO05D006760 1.3e-21 105.9 74 81.1
GSVIVG01028670001 Vitis vinifera HOM05D005517 ORTHO05D006760 1.3e-21 105.9 69 81.2
BcaC04g19059 Brassica carinata HOM05D005517 ORTHO05D006760 1.7e-21 105.5 69 79.7
C09p63000 Brassica napus HOM05D005517 ORTHO05D006760 1.7e-21 105.5 69 79.7
BolC9t59138H Brassica oleracea HOM05D005517 ORTHO05D006760 1.7e-21 105.5 69 79.7
Atru.chr6.2589 Acer truncatum HOM05D005517 ORTHO05D006760 2.2e-21 105.1 69 84.1
CiPaw.04G038900 Carya illinoinensis HOM05D005517 ORTHO05D006760 2.2e-21 105.1 70 81.4
A10p24320 Brassica napus HOM05D005517 ORTHO05D006760 3.8e-21 104.4 69 78.3
BraA10t44498Z Brassica rapa HOM05D005517 ORTHO05D006760 3.8e-21 104.4 69 78.3
Potri.001G328100 Populus trichocarpa HOM05D005517 ORTHO05D006760 3.8e-21 104.4 69 81.2
Aa31LG5G11080 Aethionema arabicum HOM05D005517 ORTHO05D006760 5.0e-21 104.0 68 83.8
Aa31LG11G14910 Aethionema arabicum HOM05D005517 ORTHO05D006760 6.5e-21 103.6 76 77.6
Glyma.16G054600 Glycine max HOM05D005517 ORTHO05D006760 6.5e-21 103.6 69 76.8
Nn3g16415 Nelumbo nucifera HOM05D005517 ORTHO05D006760 6.5e-21 103.6 69 81.2
Sabra17G0058600 Salix brachista HOM05D005517 ORTHO05D006760 6.5e-21 103.6 69 79.7
Carub.0006s1230 Capsella rubella HOM05D005517 ORTHO05D006760 8.4e-21 103.2 77 79.2
BcaB08g36959 Brassica carinata HOM05D005517 ORTHO05D006760 1.1e-20 102.8 69 76.8
C02p06560 Brassica napus HOM05D005517 ORTHO05D006760 1.1e-20 102.8 74 77.0
Manes.15G162502 Manihot esculenta HOM05D005517 ORTHO05D006760 1.1e-20 102.8 69 81.2
A02p02340 Brassica napus HOM05D005517 ORTHO05D006760 1.9e-20 102.1 76 75.0
BraA02t05205Z Brassica rapa HOM05D005517 ORTHO05D006760 1.9e-20 102.1 76 75.0
AT5G14105 Arabidopsis thaliana HOM05D005517 ORTHO05D006760 2.5e-20 101.7 77 79.2
Potri.017G066388 Populus trichocarpa HOM05D005517 ORTHO05D006760 3.2e-20 101.3 69 78.3
TAR371G1004 Trochodendron aralioides HOM05D005517 ORTHO05D006760 5.5e-20 100.5 69 79.7
AUR62000640 Chenopodium quinoa HOM05D005517 ORTHO05D006760 9.3e-20 99.8 70 72.9
BcaC03g13513 Brassica carinata HOM05D005517 ORTHO05D006760 1.6e-19 99.0 65 78.5
BcaC03g13514 Brassica carinata HOM05D005517 ORTHO05D006760 1.6e-19 99.0 76 73.7
BcaC03g13515 Brassica carinata HOM05D005517 ORTHO05D006760 1.6e-19 99.0 76 73.7
arahy.Tifrunner.gnm1.ann1.3828X0 Arachis hypogaea HOM05D005517 ORTHO05D006760 2.1e-19 98.6 69 79.7
Lalb_Chr16g0380111 Lupinus albus HOM05D005517 ORTHO05D006760 2.1e-19 98.6 69 79.7
AUR62006995 Chenopodium quinoa HOM05D005517 ORTHO05D006760 2.7e-19 98.2 69 72.5
Ca_14034_v3 Cicer arietinum L. HOM05D005517 ORTHO05D006760 2.7e-19 98.2 72 72.2
QL02p071008 Quercus lobata HOM05D005517 ORTHO05D006760 3.5e-19 97.8 64 81.2
BcaNung06018 Brassica carinata HOM05D005517 ORTHO05D006760 4.6e-19 97.4 76 72.4
Migut.F00052 Erythranthe guttata HOM05D005517 ORTHO05D006760 4.6e-19 97.4 69 76.8
Lalb_Chr05g0214841 Lupinus albus HOM05D005517 ORTHO05D006760 6.1e-19 97.1 69 78.3
TWI74G0054 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 6.1e-19 97.1 69 78.3
TWI74G0227 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 6.1e-19 97.1 69 78.3
TAR629G2363 Trochodendron aralioides HOM05D005517 ORTHO05D006760 1.0e-18 96.3 69 73.9
Aqoxy1G01489 Aquilegia oxysepala HOM05D005517 ORTHO05D006760 1.8e-18 95.5 69 71.0
Ca_26962_v3 Cicer arietinum L. HOM05D005517 ORTHO05D006760 1.8e-18 95.5 69 78.3
Thhalv10021865m.g Eutrema salsugineum HOM05D005517 ORTHO05D006760 1.8e-18 95.5 79 73.4
Lj1g0000511 Lotus japonicus HOM05D005517 ORTHO05D006760 1.8e-18 95.5 69 75.4
QL10p050767 Quercus lobata HOM05D005517 ORTHO05D006760 1.8e-18 95.5 68 77.9
CANSAT64G1159 Cannabis sativa HOM05D005517 ORTHO05D006760 2.3e-18 95.1 75 73.3
Oeu063019.1 Olea europaea HOM05D005517 ORTHO05D006760 3.0e-18 94.7 69 75.4
Os05g0517800 Oryza sativa ssp. japonica HOM05D005517 ORTHO05D006760 3.0e-18 94.7 69 73.9
Medtr7g028755 Medicago truncatula HOM05D005517 ORTHO05D006760 5.1e-18 94.0 69 78.3
vmacro22457 Vaccinium macrocarpon HOM05D005517 ORTHO05D006760 5.1e-18 94.0 69 75.4
TWI60G0382 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 6.7e-18 93.6 69 81.2
EL10Ac4g09777 Beta vulgaris HOM05D005517 ORTHO05D006760 8.7e-18 93.2 69 76.8
Cc10_g16370 Coffea canephora HOM05D005517 ORTHO05D006760 8.7e-18 93.2 70 72.9
Peaxi162Scf00420g00633 Petunia axillaris HOM05D005517 ORTHO05D006760 8.7e-18 93.2 69 72.5
Hund07167 Selenicereus undatus HOM05D005517 ORTHO05D006760 8.7e-18 93.2 69 68.1
Solyc04g009570.3 Solanum lycopersicum HOM05D005517 ORTHO05D006760 8.7e-18 93.2 69 73.9
CAN.G473.115 Capsicum annuum HOM05D005517 ORTHO05D006760 1.1e-17 92.8 69 73.9
HanXRQChr02g0035131 Helianthus annuus HOM05D005517 ORTHO05D006760 1.1e-17 92.8 69 73.9
Hma1.2p1_1057F.1_g252720 Hydrangea macrophylla HOM05D005517 ORTHO05D006760 1.1e-17 92.8 70 71.4
MBI06_g06692_MAGBIO Magnolia biondii HOM05D005517 ORTHO05D006760 1.1e-17 92.8 69 76.8
Sopen04g004730 Solanum pennellii HOM05D005517 ORTHO05D006760 1.1e-17 92.8 69 73.9
PGSC0003DMG400032535 Solanum tuberosum HOM05D005517 ORTHO05D006760 1.1e-17 92.8 69 73.9
Cc03_g13370 Coffea canephora HOM05D005517 ORTHO05D006760 1.5e-17 92.4 70 70.0
FvH4_5g10930 Fragaria vesca HOM05D005517 ORTHO05D006760 1.5e-17 92.4 69 76.8
FAN08G0577 Fragaria x ananassa HOM05D005517 ORTHO05D006760 1.5e-17 92.4 69 76.8
FAN13G3313 Fragaria x ananassa HOM05D005517 ORTHO05D006760 1.5e-17 92.4 69 76.8
FAN18G2496 Fragaria x ananassa HOM05D005517 ORTHO05D006760 1.5e-17 92.4 69 76.8
TWI34G0084 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 1.5e-17 92.4 69 79.7
TWI34G1158 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 1.5e-17 92.4 69 79.7
CSS0012820 Camellia sinensis var. sinensis HOM05D005517 ORTHO05D006760 1.9e-17 92.0 69 76.8
RcHm_v2.0_Chr1g0371371 Rosa chinensis HOM05D005517 ORTHO05D006760 1.9e-17 92.0 69 76.8
RcHm_v2.0_Chr7g0186891 Rosa chinensis HOM05D005517 ORTHO05D006760 1.9e-17 92.0 69 76.8
Eucgr.H04420 Eucalyptus grandis HOM05D005517 ORTHO05D006760 2.5e-17 91.7 69 78.3
Lsat_1_v5_gn_1_29421 Lactuca sativa HOM05D005517 ORTHO05D006760 2.5e-17 91.7 69 73.9
Dinv33325 Davidia involucrata HOM05D005517 ORTHO05D006760 3.3e-17 91.3 69 71.0
CDE08G1355 Ceratophyllum demersum HOM05D005517 ORTHO05D006760 4.3e-17 90.9 69 69.6
Lsat_1_v5_gn_4_78980 Lactuca sativa HOM05D005517 ORTHO05D006760 4.3e-17 90.9 68 73.5
PGR142G3118 Punica granatum HOM05D005517 ORTHO05D006760 4.3e-17 90.9 55 89.1
Nitab4.5_0007375g0080 Nicotiana tabacum HOM05D005517 ORTHO05D006760 5.7e-17 90.5 69 72.5
Dinv25651 Davidia involucrata HOM05D005517 ORTHO05D006760 7.4e-17 90.1 69 71.0
ECA232G0857 Erigeron canadensis HOM05D005517 ORTHO05D006760 7.4e-17 90.1 69 72.5
PSO210G3561 Papaver somniferum HOM05D005517 ORTHO05D006760 7.4e-17 90.1 69 71.0
Sopen02g038880 Solanum pennellii HOM05D005517 ORTHO05D006760 7.4e-17 90.1 69 72.5
PGSC0003DMG402020250 Solanum tuberosum HOM05D005517 ORTHO05D006760 7.4e-17 90.1 69 72.5
ClCG05G013610 Citrullus lanatus HOM05D005517 ORTHO05D006760 9.7e-17 89.7 69 75.4
MD06G1118400 Malus domestica HOM05D005517 ORTHO05D006760 9.7e-17 89.7 69 73.9
PSO302G0245 Papaver somniferum HOM05D005517 ORTHO05D006760 9.7e-17 89.7 69 72.5
Psat6g022360 Pisum sativum HOM05D005517 ORTHO05D006760 1.6e-16 89.0 69 73.9
HPP92_000894 Vanilla planifolia HOM05D005517 ORTHO05D006760 1.6e-16 89.0 69 69.6
Rhsim08G0041900 Rhododendron simsii HOM05D005517 ORTHO05D006760 2.8e-16 88.2 68 72.1
Zm00001eb293020 Zea mays HOM05D005517 ORTHO05D006760 2.8e-16 88.2 69 66.7
Prupe.5G129500 Prunus persica HOM05D005517 ORTHO05D006760 3.7e-16 87.8 69 75.4
HanXRQChr16g0497941 Helianthus annuus HOM05D005517 ORTHO05D006760 4.8e-16 87.4 69 71.0
MD14G1126500 Malus domestica HOM05D005517 ORTHO05D006760 4.8e-16 87.4 69 71.0
Medtr3g007670 Medicago truncatula HOM05D005517 ORTHO05D006760 6.3e-16 87.0 67 71.6
SEGI_12962 Sequoiadendron giganteum HOM05D005517 ORTHO05D006760 6.3e-16 87.0 68 67.6
EL10Ac7g18130 Beta vulgaris HOM05D005517 ORTHO05D006760 8.2e-16 86.7 70 70.0
Rhsim10G0005200 Rhododendron simsii HOM05D005517 ORTHO05D006760 1.1e-15 86.3 70 67.1
Phvul.009G125500 Phaseolus vulgaris HOM05D005517 ORTHO05D006760 2.4e-15 85.1 52 84.6
Sabra16G0209900 Salix brachista HOM05D005517 ORTHO05D006760 2.4e-15 85.1 55 80.0
Hund05668 Selenicereus undatus HOM05D005517 ORTHO05D006760 2.4e-15 85.1 73 71.2
THA.LOC104814182 Tarenaya hassleriana HOM05D005517 ORTHO05D006760 2.4e-15 85.1 127 48.0
CSS0038475 Camellia sinensis var. sinensis HOM05D005517 ORTHO05D006760 3.1e-15 84.7 68 67.6
Psat5g229880 Pisum sativum HOM05D005517 ORTHO05D006760 3.1e-15 84.7 69 69.6
CsaV3_3G026940 Cucumis sativus L. HOM05D005517 ORTHO05D006760 2.0e-14 82.0 70 64.3
TPR.G30072 Trifolium pratense HOM05D005517 ORTHO05D006760 2.0e-14 82.0 70 62.9
MELO3C014894.2 Cucumis melo HOM05D005517 ORTHO05D006760 2.6e-14 81.6 70 65.7
Haze_14891 Corylus avellana HOM05D005517 ORTHO05D006760 4.5e-14 80.9 51 82.4
arahy.Tifrunner.gnm1.ann1.9JMW1H Arachis hypogaea HOM05D005517 ORTHO05D006760 1.7e-13 79.0 50 82.0
Mapoly0055s0070 Marchantia polymorpha HOM05D005517 ORTHO05D006760 3.6e-11 71.2 70 55.7
Os03g0733000 Oryza sativa ssp. japonica HOM05D005517 ORTHO05D006760 3.6e-11 71.2 71 57.7
Peaxi162Scf00064g01122 Petunia axillaris HOM05D005517 ORTHO05D006760 7.9e-11 70.1 65 56.9
AagrBONN_evm.TU.Sc2ySwM_228.2988 Anthoceros agrestis HOM05D005517 ORTHO05D006760 1.8e-10 68.9 73 52.1
TPR.G36037 Trifolium pratense HOM05D005517 ORTHO05D006760 1.8e-10 68.9 50 68.0
vmacro05969 Vaccinium macrocarpon HOM05D005517 ORTHO05D006760 5.1e-10 67.4 51 68.6
Cc02_g28320 Coffea canephora HOM05D005517 ORTHO05D006760 8.8e-10 66.6 55 63.6
Pp3c1_33450 Physcomitrium patens HOM05D005517 ORTHO05D006760 4.3e-09 64.3 63 49.2
Prupe.2G009500 Prunus persica HOM05D005517 ORTHO05D006760 1.7e-08 62.4 69 62.3
Pp3c14_7680 Physcomitrium patens HOM05D005517 ORTHO05D006760 2.2e-08 62.0 59 52.5
Sed0001513 Sechium edule HOM05D005517 ORTHO05D006760 3.4e-06 54.7 63 57.1


User provided reference genes

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