Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib187G1007 Durio zibethinus HOM05D005499 ORTHO05D006666 1.2e-65 253.1 132 100.0
Duzib264G0656 Durio zibethinus HOM05D005499 ORTHO05D006666 2.6e-60 235.3 132 93.9
Thecc.04G028500 Theobroma cacao HOM05D005499 ORTHO05D006666 5.4e-58 227.6 132 90.9
Gorai.012G089400 Gossypium raimondii HOM05D005499 ORTHO05D006666 1.2e-57 226.5 132 90.9
Gohir.D10G084868 Gossypium hirsutum HOM05D005499 ORTHO05D006666 2.1e-57 225.7 132 89.4
Gorai.011G092800 Gossypium raimondii HOM05D005499 ORTHO05D006666 4.6e-57 224.6 132 88.6
COL.COLO4_29287 Corchorus olitorius HOM05D005499 ORTHO05D006666 6.7e-56 220.7 132 88.6
Gohir.D04G079400 Gossypium hirsutum HOM05D005499 ORTHO05D006666 1.1e-55 219.9 132 88.6
Ciclev10017154m.g Citrus clementina HOM05D005499 ORTHO05D006666 1.2e-52 209.9 133 82.0
Atru.chr6.2492 Acer truncatum HOM05D005499 ORTHO05D006666 1.3e-51 206.5 134 81.3
Dinv33378 Davidia involucrata HOM05D005499 ORTHO05D006666 1.3e-51 206.5 134 81.3
CiPaw.03G051000 Carya illinoinensis HOM05D005499 ORTHO05D006666 6.4e-51 204.1 134 83.6
Cpa.g.sc130.24 Carica papaya HOM05D005499 ORTHO05D006666 8.4e-51 203.8 134 82.8
Lalb_Chr21g0317581 Lupinus albus HOM05D005499 ORTHO05D006666 8.4e-51 203.8 133 80.5
Nn4g24319 Nelumbo nucifera HOM05D005499 ORTHO05D006666 8.4e-51 203.8 133 79.7
RcHm_v2.0_Chr3g0449841 Rosa chinensis HOM05D005499 ORTHO05D006666 5.5e-50 201.1 132 79.5
Gohir.A10G160300 Gossypium hirsutum HOM05D005499 ORTHO05D006666 7.1e-50 200.7 107 95.3
Haze_14820 Corylus avellana HOM05D005499 ORTHO05D006666 2.1e-49 199.1 134 80.6
Hma1.2p1_0279F.1_g112320 Hydrangea macrophylla HOM05D005499 ORTHO05D006666 2.1e-49 199.1 134 81.3
Lalb_Chr02g0157891 Lupinus albus HOM05D005499 ORTHO05D006666 2.1e-49 199.1 133 79.7
Eucgr.J02294 Eucalyptus grandis HOM05D005499 ORTHO05D006666 1.0e-48 196.8 134 77.6
TAR371G0544 Trochodendron aralioides HOM05D005499 ORTHO05D006666 1.3e-48 196.4 134 80.6
Manes.15G156800 Manihot esculenta HOM05D005499 ORTHO05D006666 3.9e-48 194.9 134 79.9
TWI36G0940 Tripterygium wilfordii HOM05D005499 ORTHO05D006666 3.9e-48 194.9 134 79.1
Cfa007270 Carpinus fangiana HOM05D005499 ORTHO05D006666 8.7e-48 193.7 133 78.9
Cc10_g08070 Coffea canephora HOM05D005499 ORTHO05D006666 8.7e-48 193.7 133 80.5
Rhsim10G0010400 Rhododendron simsii HOM05D005499 ORTHO05D006666 1.1e-47 193.4 134 79.9
Oeu003270.1 Olea europaea HOM05D005499 ORTHO05D006666 1.9e-47 192.6 134 78.4
Prupe.6G125800 Prunus persica HOM05D005499 ORTHO05D006666 3.3e-47 191.8 134 76.9
CSS0020557 Camellia sinensis var. sinensis HOM05D005499 ORTHO05D006666 4.3e-47 191.4 134 77.6
arahy.Tifrunner.gnm1.ann1.JB8R4I Arachis hypogaea HOM05D005499 ORTHO05D006666 5.6e-47 191.0 133 77.4
QL02p072772 Quercus lobata HOM05D005499 ORTHO05D006666 7.4e-47 190.7 133 77.4
arahy.Tifrunner.gnm1.ann1.C4BPDT Arachis hypogaea HOM05D005499 ORTHO05D006666 9.6e-47 190.3 133 77.4
Glyma.19G077100 Glycine max HOM05D005499 ORTHO05D006666 1.3e-46 189.9 134 77.6
VMungo0464G1619 Vigna mungo HOM05D005499 ORTHO05D006666 1.3e-46 189.9 134 76.9
HanXRQChr01g0030421 Helianthus annuus HOM05D005499 ORTHO05D006666 1.6e-46 189.5 132 78.0
Psat1g031800 Pisum sativum HOM05D005499 ORTHO05D006666 1.6e-46 189.5 134 76.1
TWI56G1275 Tripterygium wilfordii HOM05D005499 ORTHO05D006666 1.6e-46 189.5 128 79.7
TAR629G1334 Trochodendron aralioides HOM05D005499 ORTHO05D006666 2.1e-46 189.1 134 77.6
MBI11_g21381_MAGBIO Magnolia biondii HOM05D005499 ORTHO05D006666 3.7e-46 188.3 134 73.9
TPR.G3708 Trifolium pratense HOM05D005499 ORTHO05D006666 3.7e-46 188.3 134 76.1
PSO478G5160 Papaver somniferum HOM05D005499 ORTHO05D006666 4.8e-46 188.0 133 75.9
FAN05G0237 Fragaria x ananassa HOM05D005499 ORTHO05D006666 8.2e-46 187.2 137 73.7
FAN05G2282 Fragaria x ananassa HOM05D005499 ORTHO05D006666 8.2e-46 187.2 137 73.7
SalBow7G4317 Salvia bowleyana HOM05D005499 ORTHO05D006666 8.2e-46 187.2 128 76.6
FvH4_6g02050 Fragaria vesca HOM05D005499 ORTHO05D006666 1.1e-45 186.8 137 73.7
FAN05G1403 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.1e-45 186.8 137 73.7
FAN09G0379 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.1e-45 186.8 137 73.7
FAN14G4216 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.1e-45 186.8 137 73.7
Glyma.05G073700 Glycine max HOM05D005499 ORTHO05D006666 1.1e-45 186.8 134 76.9
PSO782G3924 Papaver somniferum HOM05D005499 ORTHO05D006666 1.1e-45 186.8 133 75.9
CANSAT11G2604 Cannabis sativa HOM05D005499 ORTHO05D006666 1.4e-45 186.4 134 76.1
FvH4_4g13440 Fragaria vesca HOM05D005499 ORTHO05D006666 2.4e-45 185.7 137 73.7
FAN05G4095 Fragaria x ananassa HOM05D005499 ORTHO05D006666 2.4e-45 185.7 137 73.0
FAN12G0501 Fragaria x ananassa HOM05D005499 ORTHO05D006666 2.4e-45 185.7 137 73.7
FAN14G1883 Fragaria x ananassa HOM05D005499 ORTHO05D006666 2.4e-45 185.7 134 74.6
Gohir.A05G341200 Gossypium hirsutum HOM05D005499 ORTHO05D006666 3.1e-45 185.3 132 78.8
Nitab4.5_0012484g0010 Nicotiana tabacum HOM05D005499 ORTHO05D006666 3.1e-45 185.3 133 72.9
Potri.001G335600 Populus trichocarpa HOM05D005499 ORTHO05D006666 3.1e-45 185.3 133 75.9
DCAR_011296 Daucus carota HOM05D005499 ORTHO05D006666 5.3e-45 184.5 134 74.6
ECA238G0236 Erigeron canadensis HOM05D005499 ORTHO05D006666 5.3e-45 184.5 132 77.3
Migut.K01440 Erythranthe guttata HOM05D005499 ORTHO05D006666 5.3e-45 184.5 128 78.9
Lj6g0007933 Lotus japonicus HOM05D005499 ORTHO05D006666 6.9e-45 184.1 133 75.2
Aqoxy5G03538 Aquilegia oxysepala HOM05D005499 ORTHO05D006666 9.0e-45 183.7 134 73.1
MSTRG.3267 Avicennia marina HOM05D005499 ORTHO05D006666 9.0e-45 183.7 126 77.8
Medtr6g078300 Medicago truncatula HOM05D005499 ORTHO05D006666 9.0e-45 183.7 134 73.9
FAN14G2627 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.2e-44 183.3 134 73.9
Solyc11g010180.2 Solanum lycopersicum HOM05D005499 ORTHO05D006666 1.2e-44 183.3 132 74.2
Sopen11g004960 Solanum pennellii HOM05D005499 ORTHO05D006666 1.2e-44 183.3 132 74.2
PGSC0003DMG400016154 Solanum tuberosum HOM05D005499 ORTHO05D006666 1.5e-44 183.0 132 72.7
Ca_25364_v3 Cicer arietinum L. HOM05D005499 ORTHO05D006666 2.0e-44 182.6 135 74.8
Nitab4.5_0000743g0030 Nicotiana tabacum HOM05D005499 ORTHO05D006666 2.0e-44 182.6 133 71.4
Sc10g0004570 Simmondsia chinensis HOM05D005499 ORTHO05D006666 2.0e-44 182.6 133 69.2
unitig_32.g10669 Utricularia gibba HOM05D005499 ORTHO05D006666 3.4e-44 181.8 115 78.3
AL3G10400 Arabidopsis lyrata HOM05D005499 ORTHO05D006666 5.8e-44 181.0 113 80.5
Aqoxy3G01444 Aquilegia oxysepala HOM05D005499 ORTHO05D006666 7.6e-44 180.6 136 72.8
Phvul.003G138900 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 7.6e-44 180.6 134 76.1
Phvul.003G139152 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 7.6e-44 180.6 134 76.1
Phvul.003G262000 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 7.6e-44 180.6 134 74.6
SGA_v2.0_scaffold47G17558 Striga asiatica HOM05D005499 ORTHO05D006666 7.6e-44 180.6 134 75.4
Sabra16G0216600 Salix brachista HOM05D005499 ORTHO05D006666 1.0e-43 180.3 133 74.4
Lsat_1_v5_gn_3_10761 Lactuca sativa HOM05D005499 ORTHO05D006666 1.7e-43 179.5 109 83.5
A03p32370 Brassica napus HOM05D005499 ORTHO05D006666 2.9e-43 178.7 112 79.5
C03p39430 Brassica napus HOM05D005499 ORTHO05D006666 2.9e-43 178.7 123 74.0
BolC3t16211H Brassica oleracea HOM05D005499 ORTHO05D006666 2.9e-43 178.7 112 79.5
BraA03t12407Z Brassica rapa HOM05D005499 ORTHO05D006666 2.9e-43 178.7 112 79.5
AUR62036750 Chenopodium quinoa HOM05D005499 ORTHO05D006666 3.8e-43 178.3 134 72.4
ClCG04G001400 Citrullus lanatus HOM05D005499 ORTHO05D006666 3.8e-43 178.3 127 77.2
Actinidia05936 Actinidia chinensis HOM05D005499 ORTHO05D006666 1.4e-42 176.4 133 74.4
Carub.0003s0032 Capsella rubella HOM05D005499 ORTHO05D006666 2.5e-42 175.6 121 75.2
AUR62013851 Chenopodium quinoa HOM05D005499 ORTHO05D006666 4.2e-42 174.9 134 72.4
Peaxi162Scf00016g00048 Petunia axillaris HOM05D005499 ORTHO05D006666 5.5e-42 174.5 127 71.7
MELO3C008981.2 Cucumis melo HOM05D005499 ORTHO05D006666 1.2e-41 173.3 134 73.1
QL05p048106 Quercus lobata HOM05D005499 ORTHO05D006666 1.6e-41 172.9 107 83.2
CARHR199040 Cardamine hirsuta HOM05D005499 ORTHO05D006666 2.7e-41 172.2 113 80.5
PGSC0003DMG400023637 Solanum tuberosum HOM05D005499 ORTHO05D006666 4.6e-41 171.4 133 69.9
Ah.00g000560 Amaranthus hybridus HOM05D005499 ORTHO05D006666 6.0e-41 171.0 134 70.1
Sed0019428 Sechium edule HOM05D005499 ORTHO05D006666 6.0e-41 171.0 135 72.6
CsaV3_4G031040 Cucumis sativus L. HOM05D005499 ORTHO05D006666 7.9e-41 170.6 125 74.4
Medtr4g073700 Medicago truncatula HOM05D005499 ORTHO05D006666 1.8e-40 169.5 134 70.9
THA.LOC104822403 Tarenaya hassleriana HOM05D005499 ORTHO05D006666 1.8e-40 169.5 131 70.2
HPP92_006243 Vanilla planifolia HOM05D005499 ORTHO05D006666 2.3e-40 169.1 110 80.0
Thhalv10014999m.g Eutrema salsugineum HOM05D005499 ORTHO05D006666 3.9e-40 168.3 113 77.9
Aa31LG5G10870 Aethionema arabicum HOM05D005499 ORTHO05D006666 5.1e-40 167.9 113 77.9
Hund13392 Selenicereus undatus HOM05D005499 ORTHO05D006666 6.7e-40 167.5 133 69.9
CARHR075180 Cardamine hirsuta HOM05D005499 ORTHO05D006666 1.9e-39 166.0 92 87.0
AT3G01740 Arabidopsis thaliana HOM05D005499 ORTHO05D006666 2.5e-39 165.6 126 69.0
EL10Ac2g02820 Beta vulgaris HOM05D005499 ORTHO05D006666 9.7e-39 163.7 134 68.7
Sp3g00320 Schrenkiella parvula HOM05D005499 ORTHO05D006666 9.7e-39 163.7 92 85.9
PSO782G2325 Papaver somniferum HOM05D005499 ORTHO05D006666 1.6e-38 162.9 121 73.6
CARHR105740 Cardamine hirsuta HOM05D005499 ORTHO05D006666 2.8e-38 162.2 115 73.9
CAN.G905.22 Capsicum annuum HOM05D005499 ORTHO05D006666 3.7e-38 161.8 133 66.9
AT5G14290 Arabidopsis thaliana HOM05D005499 ORTHO05D006666 8.2e-38 160.6 113 73.5
Psat7g172960 Pisum sativum HOM05D005499 ORTHO05D006666 1.1e-37 160.2 134 67.9
Nitab4.5_0003764g0020 Nicotiana tabacum HOM05D005499 ORTHO05D006666 1.8e-37 159.5 133 63.9
Thhalv10021760m.g Eutrema salsugineum HOM05D005499 ORTHO05D006666 2.4e-37 159.1 116 72.4
Cc07_g00480 Coffea canephora HOM05D005499 ORTHO05D006666 4.1e-37 158.3 134 67.9
Os12g0244200 Oryza sativa ssp. japonica HOM05D005499 ORTHO05D006666 5.3e-37 157.9 124 70.2
ATR1098G108 Amborella trichopoda HOM05D005499 ORTHO05D006666 7.6e-36 154.1 113 72.6
Gohir.1Z049635 Gossypium hirsutum HOM05D005499 ORTHO05D006666 1.3e-35 153.3 91 86.8
FAN21G0236 Fragaria x ananassa HOM05D005499 ORTHO05D006666 6.5e-35 151.0 122 65.6
AL6G24990 Arabidopsis lyrata HOM05D005499 ORTHO05D006666 8.5e-35 150.6 100 76.0
SHI11403 Sapria himalayana HOM05D005499 ORTHO05D006666 2.1e-33 146.0 107 68.2
Zm00001eb328460 Zea mays HOM05D005499 ORTHO05D006666 2.1e-33 146.0 132 59.8
Nn1g08773 Nelumbo nucifera HOM05D005499 ORTHO05D006666 6.1e-33 144.4 119 68.9
Sed0018883 Sechium edule HOM05D005499 ORTHO05D006666 3.0e-32 142.1 93 76.3
SEGI_30393 Sequoiadendron giganteum HOM05D005499 ORTHO05D006666 4.1e-29 131.7 123 58.5
FAN02G3728 Fragaria x ananassa HOM05D005499 ORTHO05D006666 4.4e-23 111.7 57 91.2
CBR_g38683 Chara braunii HOM05D005499 ORTHO05D006666 1.4e-21 106.7 109 53.2
Mapoly0005s0032 Marchantia polymorpha HOM05D005499 ORTHO05D006666 1.4e-21 106.7 110 50.9
Pp3c26_11040 Physcomitrium patens HOM05D005499 ORTHO05D006666 2.6e-20 102.4 92 54.3
SMO164G0004 Selaginella moellendorffii HOM05D005499 ORTHO05D006666 3.8e-19 98.6 106 50.0
AagrBONN_evm.TU.Sc2ySwM_362.2497 Anthoceros agrestis HOM05D005499 ORTHO05D006666 3.6e-17 92.0 106 46.2
CARHR266370 Cardamine hirsuta HOM05D005499 ORTHO05D006666 3.0e-16 89.0 76 63.2
TAR374G0914 Trochodendron aralioides HOM05D005499 ORTHO05D006666 2.2e-14 82.8 95 52.6
MCO16G647 Micromonas commoda HOM05D005499 ORTHO05D006666 1.0e-11 73.9 124 36.3
Cre12.g546000 Chlamydomonas reinhardtii HOM05D005499 ORTHO05D006666 2.2e-11 72.8 98 41.8
Dinv24762 Davidia involucrata HOM05D003270 ORTHO05D003662 5.0e-11 71.6 116 44.0
Actinidia36173 Actinidia chinensis HOM05D005499 ORTHO05D006666 9.7e-07 57.4 82 53.7
PRCOL_00001894 Prasinoderma coloniale HOM05D005499 ORTHO05D006666 4.8e-06 55.1 95 33.7


User provided reference genes

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